Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178455.1_202017-04-
22] 3,297 sequences; 12,571,070 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq285 179 6e-43
seq1827 132 8e-29
seq391 131 3e-28
>seq285
Length=548
Score = 179 bits (198), Expect = 6e-43
Identities = 121/133 (91%), Gaps = 2/133 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||| | | ||| || |||||||||||||||||||||||| |||||| |
Sbjct 418 GTACGAGAGGAACAGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 475
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct 476 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 535
Query 121 GAACGGGGTGATT 133
||||| |||||||
Sbjct 536 GAACGCGGTGATT 548
>seq1827
Length=4291
Score = 132 bits (146), Expect = 8e-29
Identities = 161/213 (76%), Gaps = 15/213 (7%)
Strand=Plus/Plus
Query 80 CTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGATTCTCT-C 138
||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| | |
Sbjct 1 CTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTAGAACGCGGTGATTCTTTGC 60
Query 139 CT-GCACATCGTAGTCGGATACGAAT-AGGCTT--------CGGCCCCGAACCTTAGCAG 188
|| |||| |||| |||||||||| |||| | || | | | ||| |||| |
Sbjct 61 CTCACACAAGGTAGATGGATACGAATAAGGCGTCCTTGTGACGCCGCTGGACCATAGCGG 120
Query 189 GCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTCAGCTGGCGGATTGCAATTTC 245
||||||||||| || |||||| || ||| ||| || ||||||| ||||| ||
Sbjct 121 GCCGGCAACGGTGCTCTTGGCGGAAAGGCCTTGGGTGCT-TGCCGGCGGATAGCAATGTC 179
Query 246 ACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
| || | |||||||||| |||| | |||||
Sbjct 180 ATTTTGAGTGGGGATAAATCATTTGTATACGAC 212
>seq391
Length=415
Score = 131 bits (144), Expect = 3e-28
Identities = 161/214 (75%), Gaps = 16/214 (7%)
Strand=Plus/Minus
Query 80 CTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGA-TTCTCTC 138
||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||| |
Sbjct 415 CTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTAGAACGCGGTGATTTCTTTG 356
Query 139 CT--GCACATCGTAGTCGGATACGAAT-AGGCTT--------CGGCCCCGAACCTTAGCA 187
|| |||| ||| |||||||||| |||| | || | | ||||| |||||
Sbjct 355 CTCCACACAATATAGATGGATACGAATAAGGCGTCCTTGTGGCGTCGCTGAACCATAGCA 296
Query 188 GGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTCAGCTGGCGGATTGCAATTT 244
||| ||||||| || |||||| || ||| ||| ||||||| |||||||| |
Sbjct 295 GGCTAGCAACGGTGCACTTGGCGGAAAGGCCTTGGGTGCT-TGCTGGCGAATTGCAATGT 237
Query 245 CACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|| |||| |||||||||| |||| | |||||
Sbjct 236 CATTTTGCGTGGGGATAAATCATTTGTATACGAC 203
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819173835008
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |