Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178455.1_202017-04- 22] 3,297 sequences; 12,571,070 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq285 179 6e-43 seq1827 132 8e-29 seq391 131 3e-28 >seq285 Length=548 Score = 179 bits (198), Expect = 6e-43 Identities = 121/133 (91%), Gaps = 2/133 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | ||| || |||||||||||||||||||||||| |||||| | Sbjct 418 GTACGAGAGGAACAGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 475 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct 476 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 535 Query 121 GAACGGGGTGATT 133 ||||| ||||||| Sbjct 536 GAACGCGGTGATT 548 >seq1827 Length=4291 Score = 132 bits (146), Expect = 8e-29 Identities = 161/213 (76%), Gaps = 15/213 (7%) Strand=Plus/Plus Query 80 CTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGATTCTCT-C 138 ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| | | Sbjct 1 CTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTAGAACGCGGTGATTCTTTGC 60 Query 139 CT-GCACATCGTAGTCGGATACGAAT-AGGCTT--------CGGCCCCGAACCTTAGCAG 188 || |||| |||| |||||||||| |||| | || | | | ||| |||| | Sbjct 61 CTCACACAAGGTAGATGGATACGAATAAGGCGTCCTTGTGACGCCGCTGGACCATAGCGG 120 Query 189 GCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTCAGCTGGCGGATTGCAATTTC 245 ||||||||||| || |||||| || ||| ||| || ||||||| ||||| || Sbjct 121 GCCGGCAACGGTGCTCTTGGCGGAAAGGCCTTGGGTGCT-TGCCGGCGGATAGCAATGTC 179 Query 246 ACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 | || | |||||||||| |||| | ||||| Sbjct 180 ATTTTGAGTGGGGATAAATCATTTGTATACGAC 212 >seq391 Length=415 Score = 131 bits (144), Expect = 3e-28 Identities = 161/214 (75%), Gaps = 16/214 (7%) Strand=Plus/Minus Query 80 CTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGA-TTCTCTC 138 ||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||| | Sbjct 415 CTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTAGAACGCGGTGATTTCTTTG 356 Query 139 CT--GCACATCGTAGTCGGATACGAAT-AGGCTT--------CGGCCCCGAACCTTAGCA 187 || |||| ||| |||||||||| |||| | || | | ||||| ||||| Sbjct 355 CTCCACACAATATAGATGGATACGAATAAGGCGTCCTTGTGGCGTCGCTGAACCATAGCA 296 Query 188 GGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTCAGCTGGCGGATTGCAATTT 244 ||| ||||||| || |||||| || ||| ||| ||||||| |||||||| | Sbjct 295 GGCTAGCAACGGTGCACTTGGCGGAAAGGCCTTGGGTGCT-TGCTGGCGAATTGCAATGT 237 Query 245 CACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 || |||| |||||||||| |||| | ||||| Sbjct 236 CATTTTGCGTGGGGATAAATCATTTGTATACGAC 203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819173835008