Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178465.1_202017-04- 21] 1,925 sequences; 12,039,202 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq82 594 2e-167 seq1923 141 3e-31 seq34 125 2e-26 >seq82 Length=2270 Score = 594 bits (658), Expect = 2e-167 Identities = 380/409 (93%), Gaps = 6/409 (1%) Strand=Plus/Minus Query 137 GGACCTT-AACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGATTAAGTaaa 195 ||||||| || || |||| ||| |||| |||| ||||||||||||| |||||||| Sbjct 2262 GGACCTTGAATGCTAGAACGTGGAAAATGAATTCCAGCTCCGCTTCATTGAATAAGTAAA 2203 Query 196 aaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTCTACACC 255 |||| |||| ||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct 2202 GAAACTATAAAGGTAGTGGTATTTCACTGGCGCCGAA---GCTCCCACTTATTCTACACC 2146 Query 256 TCTCAA-GTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCG 314 ||| | ||| ||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct 2145 -CTCTATGTCTCTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCG 2087 Query 315 CTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGT 374 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2086 CTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGT 2027 Query 375 GGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACC 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2026 GGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACC 1967 Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1966 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 1907 Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1906 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 1858 >seq1923 Length=1012 Score = 141 bits (156), Expect = 3e-31 Identities = 86/91 (95%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 91 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATC 32 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTC 97 ||||||||||||||||||||||||||||||| Sbjct 31 GTTTAACAGATGTGCCGCCCCAGCCAAACTC 1 >seq34 Length=61125 Score = 125 bits (138), Expect = 2e-26 Identities = 75/79 (95%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 22 AGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTGC 81 |||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||| Sbjct 61125 AGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATCGTTTAACAGATGTGC 61066 Query 82 CGCCCCAGCCAAACTCCCC 100 |||||||||||||||| || Sbjct 61065 CGCCCCAGCCAAACTCTCC 61047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635168522400