Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178485.1_202017-04-
21] 2,013 sequences; 11,819,375 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq1776 383 5e-104
seq288 257 5e-66
seq513 235 2e-59
seq891 217 5e-54
seq1096 206 9e-51
seq152 109 2e-21
>seq1776
Length=434
Score = 383 bits (424), Expect = 5e-104
Identities = 212/212 (100%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 332 GTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCC 391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 434 GTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCC 375
Query 392 ATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTT 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 374 ATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTT 315
Query 452 ACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGG 511
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 314 ACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGG 255
Query 512 CAGAAATCACATTGCGTCAACATCACTTTCTG 543
||||||||||||||||||||||||||||||||
Sbjct 254 CAGAAATCACATTGCGTCAACATCACTTTCTG 223
>seq288
Length=202
Score = 257 bits (284), Expect = 5e-66
Identities = 177/197 (90%), Gaps = 5/197 (3%)
Strand=Plus/Minus
Query 163 TGAAGACCAGTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCAC 222
|||| |||| ||||||||||||| |||||||| |||| |||| ||||||||||||||||
Sbjct 193 TGAATTCCAGCTCCGCTTCATTGAATAAGTAAAGAAACTATAAAGGTAGTGGTATTTCAC 134
Query 223 TTGCGCCGAAACGGCTCCCACTTATTCTACACCTCTCAA-GTCATTTCACAAAGTCGGAC 281
|||||||||| |||||||||||||||||||| ||| | ||| ||||||| ||| ||
Sbjct 133 TTGCGCCGAA---GCTCCCACTTATTCTACACC-CTCTATGTCTCTTCACAATGTCAAAC 78
Query 282 TAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGG 341
|||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 77 TAGAGTTAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGG 18
Query 342 CTGTGGTTTCGCTAGAT 358
|||||||||||||||||
Sbjct 17 CTGTGGTTTCGCTAGAT 1
>seq513
Length=195
Score = 235 bits (260), Expect = 2e-59
Identities = 172/196 (88%), Gaps = 4/196 (2%)
Strand=Plus/Plus
Query 31 TTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGC 90
||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct 1 TTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATCGTTTAACAGATGTGCCGCCCCAGC 60
Query 91 CAAACTCCCCACCTGACAATGTCATCAACCCGGATCGGCCCGCGAA--GGACCTT-AACG 147
||||||||||||||||||||||| |||||||||||| |||| |||| ||||||| || |
Sbjct 61 CAAACTCCCCACCTGACAATGTCTTCAACCCGGATCAGCCC-CGAATGGGACCTTGAATG 119
Query 148 CCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGG 207
| |||| ||| |||| |||| ||||||||||||| |||||||| |||| |||| |
Sbjct 120 CTAGAACGTGGAAAATGAATTCCAGCTCCGCTTCATTGAATAAGTAAAGAAACTATAAAG 179
Query 208 GTAGTGGTATTTCACT 223
||||||||||||||||
Sbjct 180 GTAGTGGTATTTCACT 195
>seq891
Length=141
Score = 217 bits (240), Expect = 5e-54
Identities = 129/135 (96%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 267 TTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCA 326
||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 7 TTCACAATGTGAAACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCA 66
Query 327 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTT 386
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 67 AGCCAGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTT 126
Query 387 AATCCATTCATGCGC 401
|||||||||||||||
Sbjct 127 AATCCATTCATGCGC 141
>seq1096
Length=174
Score = 206 bits (228), Expect = 9e-51
Identities = 149/169 (88%), Gaps = 5/169 (3%)
Strand=Plus/Minus
Query 163 TGAAGACCAGTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCAC 222
|||| |||| ||||||||||||| |||||||| |||| |||| ||||||||||||||||
Sbjct 165 TGAATTCCAGCTCCGCTTCATTGAATAAGTAAAGAAACTATAAAGGTAGTGGTATTTCAC 106
Query 223 TTGCGCCGAAACGGCTCCCACTTATTCTACACCTCTCAA-GTCATTTCACAAAGTCGGAC 281
| |||||||| |||||||||||||||||||| ||| | ||| ||||||| ||| ||
Sbjct 105 TGGCGCCGAA---GCTCCCACTTATTCTACACC-CTCTATGTCTCTTCACAATGTCAAAC 50
Query 282 TAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCC 330
|||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 49 TAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCC 1
>seq152
Length=5085
Score = 109 bits (120), Expect = 2e-21
Identities = 66/70 (94%), Gaps = 0/70 (0%)
Strand=Plus/Minus
Query 31 TTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGC 90
||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct 5085 TTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATCGTTTAACAGATGTGCCGCCCCAGC 5026
Query 91 CAAACTCCCC 100
||||||| ||
Sbjct 5025 CAAACTCTCC 5016
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635167083424
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |