Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178485.1_202017-04- 21] 2,013 sequences; 11,819,375 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq1776 383 5e-104 seq288 257 5e-66 seq513 235 2e-59 seq891 217 5e-54 seq1096 206 9e-51 seq152 109 2e-21 >seq1776 Length=434 Score = 383 bits (424), Expect = 5e-104 Identities = 212/212 (100%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 332 GTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCC 391 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 434 GTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCC 375 Query 392 ATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTT 451 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 374 ATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTT 315 Query 452 ACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGG 511 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 314 ACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGG 255 Query 512 CAGAAATCACATTGCGTCAACATCACTTTCTG 543 |||||||||||||||||||||||||||||||| Sbjct 254 CAGAAATCACATTGCGTCAACATCACTTTCTG 223 >seq288 Length=202 Score = 257 bits (284), Expect = 5e-66 Identities = 177/197 (90%), Gaps = 5/197 (3%) Strand=Plus/Minus Query 163 TGAAGACCAGTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCAC 222 |||| |||| ||||||||||||| |||||||| |||| |||| |||||||||||||||| Sbjct 193 TGAATTCCAGCTCCGCTTCATTGAATAAGTAAAGAAACTATAAAGGTAGTGGTATTTCAC 134 Query 223 TTGCGCCGAAACGGCTCCCACTTATTCTACACCTCTCAA-GTCATTTCACAAAGTCGGAC 281 |||||||||| |||||||||||||||||||| ||| | ||| ||||||| ||| || Sbjct 133 TTGCGCCGAA---GCTCCCACTTATTCTACACC-CTCTATGTCTCTTCACAATGTCAAAC 78 Query 282 TAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGG 341 |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 77 TAGAGTTAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGG 18 Query 342 CTGTGGTTTCGCTAGAT 358 ||||||||||||||||| Sbjct 17 CTGTGGTTTCGCTAGAT 1 >seq513 Length=195 Score = 235 bits (260), Expect = 2e-59 Identities = 172/196 (88%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 31 TTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGC 90 ||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||| Sbjct 1 TTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATCGTTTAACAGATGTGCCGCCCCAGC 60 Query 91 CAAACTCCCCACCTGACAATGTCATCAACCCGGATCGGCCCGCGAA--GGACCTT-AACG 147 ||||||||||||||||||||||| |||||||||||| |||| |||| ||||||| || | Sbjct 61 CAAACTCCCCACCTGACAATGTCTTCAACCCGGATCAGCCC-CGAATGGGACCTTGAATG 119 Query 148 CCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGG 207 | |||| ||| |||| |||| ||||||||||||| |||||||| |||| |||| | Sbjct 120 CTAGAACGTGGAAAATGAATTCCAGCTCCGCTTCATTGAATAAGTAAAGAAACTATAAAG 179 Query 208 GTAGTGGTATTTCACT 223 |||||||||||||||| Sbjct 180 GTAGTGGTATTTCACT 195 >seq891 Length=141 Score = 217 bits (240), Expect = 5e-54 Identities = 129/135 (96%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 267 TTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCA 326 ||||||| || |||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 7 TTCACAATGTGAAACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCA 66 Query 327 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTT 386 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 67 AGCCAGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTT 126 Query 387 AATCCATTCATGCGC 401 ||||||||||||||| Sbjct 127 AATCCATTCATGCGC 141 >seq1096 Length=174 Score = 206 bits (228), Expect = 9e-51 Identities = 149/169 (88%), Gaps = 5/169 (3%) Strand=Plus/Minus Query 163 TGAAGACCAGTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCAC 222 |||| |||| ||||||||||||| |||||||| |||| |||| |||||||||||||||| Sbjct 165 TGAATTCCAGCTCCGCTTCATTGAATAAGTAAAGAAACTATAAAGGTAGTGGTATTTCAC 106 Query 223 TTGCGCCGAAACGGCTCCCACTTATTCTACACCTCTCAA-GTCATTTCACAAAGTCGGAC 281 | |||||||| |||||||||||||||||||| ||| | ||| ||||||| ||| || Sbjct 105 TGGCGCCGAA---GCTCCCACTTATTCTACACC-CTCTATGTCTCTTCACAATGTCAAAC 50 Query 282 TAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCC 330 |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 49 TAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCC 1 >seq152 Length=5085 Score = 109 bits (120), Expect = 2e-21 Identities = 66/70 (94%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 31 TTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGC 90 ||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||| Sbjct 5085 TTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATCGTTTAACAGATGTGCCGCCCCAGC 5026 Query 91 CAAACTCCCC 100 ||||||| || Sbjct 5025 CAAACTCTCC 5016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635167083424