Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178485.1_202017-04- 21] 2,013 sequences; 11,819,375 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq402 174 3e-41 seq910 161 2e-37 seq813 156 7e-36 >seq402 Length=332 Score = 174 bits (192), Expect = 3e-41 Identities = 187/241 (78%), Gaps = 16/241 (7%) Strand=Plus/Minus Query 53 CAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAAT 112 |||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 330 CAGGCATTGCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAGAAT 271 Query 113 CCATGCCAGAACGGGGTGA-TTCTCTCCT--GCACATCGTAGTCGGATACGAAT-AGGCT 168 |||||| |||||| ||||| |||| | || |||| ||| |||||||||| |||| Sbjct 270 CCATGCTAGAACGCGGTGATTTCTTTGCTCCACACAATATAGATGGATACGAATAAGGCG 211 Query 169 T--------CGGCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCG 217 | || | | ||||| |||||||| ||||||| || |||||| || Sbjct 210 TCCTTGTGGCGTCGCTGAACCATAGCAGGCTAGCAACGGTGCACTTGGCGGAAAGGCCTT 151 Query 218 GGGCGCTCAGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGA 277 ||| ||| |||||||||||||||| ||| |||| |||||||||| |||| | |||| Sbjct 150 GGGTGCT-TGCTGGCGGATTGCAATGTCATTTTGCGTGGGGATAAATCATTTGTATACGA 92 Query 278 C 278 | Sbjct 91 C 91 >seq910 Length=141 Score = 161 bits (178), Expect = 2e-37 Identities = 108/118 (92%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | ||| || |||||||||||||||||||||||| |||||| | Sbjct 118 GTACGAGAGGAACAGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 61 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 60 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 3 >seq813 Length=141 Score = 156 bits (172), Expect = 7e-36 Identities = 107/118 (91%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | ||| || |||||||||||||||||||||| | |||||| | Sbjct 118 GTACGAGAGGAACAGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTAATCAGGCATT 61 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 60 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819184024832