Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178485.1_202017-04- 21] 2,013 sequences; 11,819,375 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1720 540 3e-151 seq1844 219 1e-54 seq783 214 5e-53 seq830 123 8e-26 seq966 91.5 4e-16 seq1229 87.8 5e-15 >seq1720 Length=374 Score = 540 bits (598), Expect = 3e-151 Identities = 349/376 (93%), Gaps = 6/376 (2%) Strand=Plus/Plus Query 130 CCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTAT 189 ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct 1 CCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGAAACCATGGTAGGCCACTAT 60 Query 190 CCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCAT 249 ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct 61 CCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCAGCACAAGGCCAT 120 Query 250 GCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCT 309 |||||||| |||||||||||||||| ||| ||| ||||| | | ||| |||||||||| Sbjct 121 GCGATTCGAAAAGTTATTATGAATCATCAAAGAG-TCCGAA-GACATTGATTTTTTATCT 178 Query 310 AATAAATACACCCCTTCCGAA--GTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACC 367 |||||||||| | ||||| || |||| | |||| ||||||||||||||||||||||||| Sbjct 179 AATAAATACATCTCTTCCAAAGGGTCGAGATTTTAAGCATGTATTAGCTCTAGAATTACC 238 Query 368 ACGGTTAT-CCATGTAGT-AAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCAT 425 || ||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||| Sbjct 239 ACAGTTATACCATGTAGTAAAGGAACTATCAAATAAACGATAACTGATTTAATGAGCCAT 298 Query 426 TCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACA 485 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 299 TCGCAGTTTCACTGTATAAATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACA 358 Query 486 AGCATATGACTACTGG 501 |||||||||||||||| Sbjct 359 AGCATATGACTACTGG 374 >seq1844 Length=141 Score = 219 bits (242), Expect = 1e-54 Identities = 126/129 (98%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 71 GGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTC 130 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 13 GGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCGC 72 Query 131 CCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATC 190 |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| Sbjct 73 CCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGAAACCATGGTAGGCCACTATC 132 Query 191 CTACCATCG 199 ||||||||| Sbjct 133 CTACCATCG 141 >seq783 Length=141 Score = 214 bits (236), Expect = 5e-53 Identities = 132/141 (94%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 58 CCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCC 117 |||||| | | |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1 CCTCCCTGAATTAGGATTGGGAAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCC 60 Query 118 GTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATG 177 |||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||| Sbjct 61 GTTTCTCAGGATCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGAAACCATG 120 Query 178 GTAGGCCACTATCCTACCATC 198 ||||||||||||||||||||| Sbjct 121 GTAGGCCACTATCCTACCATC 141 >seq830 Length=141 Score = 123 bits (136), Expect = 8e-26 Identities = 71/73 (97%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 432 TTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATA 491 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 141 TTTCACTGTATAAATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATA 82 Query 492 TGACTACTGGCAG 504 |||||||||| || Sbjct 81 TGACTACTGGAAG 69 >seq966 Length=141 Score = 91.5 bits (100), Expect = 4e-16 Identities = 58/63 (92%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||| || | |||||||||| |||||||||||||||||| Sbjct 68 GTACTCATTCCAATTACAAGACCCGAATGGGCCCTGTATCGTTATTTATTGTCACTACCT 127 Query 61 CCC 63 ||| Sbjct 128 CCC 130 >seq1229 Length=141 Score = 87.8 bits (96), Expect = 5e-15 Identities = 57/63 (90%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||| |||||||||||||||||||| || | |||||||||| |||||||||||||||||| Sbjct 74 GTAATCATTCCAATTACAAGACCCGAATGGGCCCTGTATCGTTATTTATTGTCACTACCT 15 Query 61 CCC 63 ||| Sbjct 14 CCC 12 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510369595648