Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20cerevisiae_20[genbank_20GCA_5F900178495.1_202017-04- 21] 1,028 sequences; 11,708,083 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq2 136 3e-27 seq891 120 2e-22 seq752 116 3e-21 >seq2 Length=340854 Score = 136 bits (150), Expect = 3e-27 Identities = 393/605 (65%), Gaps = 0/605 (0%) Strand=Plus/Plus Query 66320 CCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCG 66379 |||| | ||| ||||| ||| || |||||||| ||||| || || ||| | ||| Sbjct 63231 CCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGGAACAAATCT 63290 Query 66380 CGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCG 66439 | ||| || ||||| | ||||| || || | | || | || ||||| || || Sbjct 63291 CTTGCACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATCAATAAAATCAAATATATCA 63350 Query 66440 GCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCG 66499 |||||||||||||||||||| | ||| |||| || | ||| ||||| ||||| Sbjct 63351 GCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCTTTTATTACCACCCTGGTCA 63410 Query 66500 ACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCA 66559 || || || || || ||||| ||||| | ||| || | | |||||||| | || Sbjct 63411 ACATAACGGGCAGTGTTATTGAAAACACGAATCATAGGAATTAAACCGTTAGAAGTACCG 63470 Query 66560 TTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCA 66619 || || || | ||| || || || || || | || | || |||||||||||| Sbjct 63471 TTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAATACCA 63530 Query 66620 CCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAG 66679 || || || || || || |||||| || || || | | || || || || ||| Sbjct 63531 CCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGGTGTCGTAAATCCCCTCGATAGAG 63590 Query 66680 TCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAG 66739 || |||| |||| | | | | || || | ||| ||||| || || |||| | Sbjct 63591 TCCTCCTTCATGGCAACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCGGCATTG 63650 Query 66740 AAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATG 66799 || | || || | ||||| ||||| || | ||||||| | || ||||| || | Sbjct 63651 AACAACGTTGGAGAGGCGTGAGTAAAATATTTTAGAGACATCAAGTTATACGTTTCTAAA 63710 Query 66800 ACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGC 66859 |||| || || | | || || || || ||||| || ||| | | | ||| || Sbjct 63711 GCAGCCTCGATATCTCTACCGTGGATGCCTAGTGCGACTCTCATAATTAAATGTTGTGGA 63770 Query 66860 CGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCA 66919 |||||| ||| || | ||||| | ||| || || ||||||| || || | |||| Sbjct 63771 CGTTCGGCCACTTGACCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAAAACCA 63830 Query 66920 AAGTA 66924 || || Sbjct 63831 AAATA 63835 >seq891 Length=41648 Score = 120 bits (132), Expect = 2e-22 Identities = 371/569 (65%), Gaps = 15/569 (3%) Strand=Plus/Minus Query 61066 TTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGG 61125 ||||| ||| |||| | || || |||| ||||| || |||||||| |||||| Sbjct 23794 TTCCCTATCAAGTACCATGAAATCTGGCAAGCCTACAAGCGTGCCGAAGCTTCTTTCTGG 23735 Query 61126 ACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGCGTTTATCGAGCGGT 61185 || | || || | |||||||| || || || |||||||| | | || || Sbjct 23734 ACCGCTGAAGAAATTGATTTGTCTAAGGATATCCATGACTGGAACAACAGAATGAACGA- 23676 Query 61186 GAACAACA----TTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGT 61241 |||| | | ||||||| || | || || || |||||||| |||||||| || Sbjct 23675 GAACGAGAGATTTTTCATTTCCAGAGTTCTTGCCTTTTTCGCCGCTTCTGACGGTATTGT 23616 Query 61242 CAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTT 61301 ||||| || || | ||| ||| | || || ||| | | ||||| |||| Sbjct 23615 TAATGAAAACTTGGTTGAAAACTTCTCCACCGAAGTCCAAATTCCAGAGGCAAAGAGTTT 23556 Query 61302 CTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGA 61361 |||||| ||||| || || || ||| | ||||| || | ||| | | ||||| Sbjct 23555 CTACGGTTTCCAAATCATGATTGAAAATATTCACTCTGAAACTTACTCCTTGTTGATCGA 23496 Query 61362 TACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACC 61421 ||| ||||||| ||| | ||| ||||| |||||||||||||| | || || || Sbjct 23495 TACCTACATCAAGGACCCTAAAGAAAGTGAATTCTTGTTCAATGCCATTCACACCATCCC 23436 Query 61422 GG----CGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGA-TCACCAGTACAACGGCT 61476 | |||||| ||| || || ||||| || | |||| ||| | ||| || Sbjct 23435 AGAAATCGGTGA----GAAGGCCGAATGGGCTTTAAGATGGATTCAAGACGCTGACGCCT 23380 Query 61477 ACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCG 61536 ||||||||| || | | || ||||| | || ||||| |||||| || || Sbjct 23379 -TGTTTGGTGAAAGACTAGTTGCCTTTGCCTCCATTGAAGGTGTCTTTTTCTCCGGTTCC 23321 Query 61537 TTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAAT 61596 |||||| | || || |||||||| || | || | ||||||||| | ||||| ||| Sbjct 23320 TTTGCCTCCATTTTCTGGTTGAAAAAGAGAGGTATGATGCCCGGTTTAACCTTTTCCAAC 23261 Query 61597 GAGTTGATATCACGCGACGAGGGCATGCA 61625 || ||||| | | ||||| || |||| Sbjct 23260 GAATTGATCTGTAGAGACGAAGGTTTGCA 23232 >seq752 Length=243896 Score = 116 bits (128), Expect = 3e-21 Identities = 415/644 (64%), Gaps = 10/644 (2%) Strand=Plus/Plus Query 66320 CCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCG 66379 ||||||| || ||||| ||| || |||||||| ||||| || || ||| | ||| Sbjct 159080 CCATCCTCTTGAACACGTTTCATGAAAAGATCAGGGATCCATAGAGCAGGGAACAAATCT 159139 Query 66380 CGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCG 66439 | ||| || || || | || || |||| | | |||| || || ||||| || Sbjct 159140 CTTGCACGAATTTCTTCCTTACCATGTGTTTTTCTGATATCGACAAAGTCGAAGATATCT 159199 Query 66440 GCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCG 66499 ||||||||||| |||| | | | |||||| | || | ||| ||||| ||||| Sbjct 159200 GCATGCCATGGCTCCAAGAAAAGGGCGAAAGCACCAGGTCTCTTGTTACCACCCTGGTCC 159259 Query 66500 ACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCA 66559 || || || || ||| ||||| ||||| | ||| || | | |||||| || | || Sbjct 159260 ACATAACGGGCAGTATTATTGAAAACACGAATCATAGGAATCAACCCGTTTGAAGTACCG 159319 Query 66560 TTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCA 66619 ||||| || |||| || ||| | || || | || | || ||||||| |||| Sbjct 159320 TTGGTACCAGCGATATAAGAACCTGTGGAACGGATGTTGTTGATATGAAGACCAACACCA 159379 Query 66620 CCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAG 66679 || || || || || || |||||| || || || | || || || || ||| Sbjct 159380 CCTGCAGTTTTGGAAATCATAGCACATTCTTTCAAAGTATCATAAATACCTTCGATAGAG 159439 Query 66680 TCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAG 66739 ||| |||| |||| | | | | |||||| | ||| || | || || | || | Sbjct 159440 TCATCCTTCATGGCAATTAAGAAACATGAAGACATTTGAGGATGTGGCGTACCAGCGTTG 159499 Query 66740 AAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATG 66799 || | || || | |||||| || ||||| ||||| |||| || |||| | Sbjct 159500 AATAAAGTTGGGGAAGCGTGAGTGAAGTATCTTAACGACATCAAATTATAAGTCTTCAGC 159559 Query 66800 ACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGAGGTATTGAGG 66858 |||| || || | ||||| || || || | |||| ||||| | | | ||||| Sbjct 159560 ACAGATTCGATATCGCTACCATGGATACCTAGCGCCACA-CGCATTACCAAATGCTGAGG 159618 Query 66859 CCGTTCGACCA----GCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGA 66914 ||||| ||| ||| || | || || ||||| || || ||||| ||||||| Sbjct 159619 ACGTTCTGCCACTTCACCGTTCAGTCTTA-GC---AAGTACGAACGCTCCAGTGTCTTGA 159674 Query 66915 TACCAAAGTACGAGTAATTGAAATCGTTAGCATGCACGATGGCC 66958 || || |||| || | |||||| || | | |||||||||| Sbjct 159675 ATCCGAAATACGTATACTGGAAATCCCTATCGTACACGATGGCC 159718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397563018969920