Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079055.1_202017-03- 21] 17 sequences; 12,092,810 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq9 181 8e-41 seq5 158 1e-33 seq10 109 4e-19 >seq9 Length=443128 Score = 181 bits (200), Expect = 8e-41 Identities = 981/1553 (63%), Gaps = 39/1553 (3%) Strand=Plus/Plus Query 65421 GATTGATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGG 65480 |||| | ||||||||| || || |||| |||||||| || ||||| || || | | Sbjct 233680 GATTAACGACTTGGAATTCACCAGACAAGACACGACGAGAGTACATGTTTGAAGTCACTG 233739 Query 65481 GTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGA 65540 |||| || |||| | | || |||||||| | ||| || ||||||||||| || || | Sbjct 233740 GTTCGAAACATTCGTTATATCCAAGAATTTGAGAAGTTGAGGCAGTTGGCATTGGCGCCA 233799 Query 65541 CCAACAATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCC 65600 ||| ||||||| ||||| | | |||||| | | || ||||| | || Sbjct 233800 TTGTCAAAGAGTTTCTTAATCCATGTTTGACAATGTCCTTTCTTAAGGTTTCCCAATCCC 233859 Query 65601 ACAT-CGGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTG 65659 |||| | | | | | ||| | ||||| || ||| || | || || | Sbjct 233860 ACATACCAAATGGCTTAG-CATTC------CACATGTCAAATTGTAGAATACCTTTAGAG 233912 Query 65660 GCCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTC 65719 || || ||||| |||| || ||| || |||| || || | || |||| || Sbjct 233913 GCTGGAGAACCTTCGAAAGTAGAATACTTACCTTCCTTCTGTGCCAATTCACAGGAGGCT 233972 Query 65720 TCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATT--AAGTTCACGTGCCTCAT 65777 || || | ||| ||||||||| |||||||| || || ||||| | || || | Sbjct 233973 TCAAGAGTAGCATGATAAATGGTTTCGAAAATCTGTTTGTTCAAAGTTT--GAGCTTCTT 234030 Query 65778 CGCTCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATAC 65837 | || | || | || || || | | | || ||||||||||||||||| || | Sbjct 234031 CTGATTCAAAAGGTAGACGCAACATCATATAGGTATCGGCCAGACCTTGAACACCCAAGG 234090 Query 65838 CGATGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATAT 65897 | || || | ||| | || ||| ||| ||| || ||||| || || || ||||| | Sbjct 234091 CAATAGGTCTATGCCTCATATTTGAATTTCTGGCTTCAGGAACTGGATAATAATTACGGT 234150 Query 65898 CGATAATGCGATTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAAT 65957 |||| | | ||||| || | || | || | | || | || ||||||| Sbjct 234151 CGATGACTCTGTTCAAGTTATGGGTAATGACTTTAGCAATTTCATGTAAACTCTCGAAAT 234210 Query 65958 CAAAATGTTTAGG---ACGATCGGGAGTGCCGGACACC---ACAAACTTGGGAAGGGCAA 66011 | || | || || ||| || ||| | ||||| || ||||||| Sbjct 234211 TATAACTTGCAGTTTTACCATCTTCAG------ACATCTCGACAAATGCTGGGAGGGCAA 234264 Query 66012 GAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGC 66071 ||| || || || || || || | || || || | | ||||||||| ||||| | Sbjct 234265 TAGAGGCTAGATTACAAACGGCGGTTTCATCTGGGGAAGAATACTCGACGATTTCACAAC 234324 Query 66072 ACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCAT 66131 ||| || | ||||| ||||| |||||||| || |||| | || ||||| | Sbjct 234325 ACAAGTTGGATGATTTAATGGTACCCAAGTTCTGTTGGTTTGTCTTTCTGTTACATGCGT 234384 Query 66132 CCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAA 66191 ||||||| | |||| | || || || || || ||| | | | ||||| | ||| | Sbjct 234385 CCTTGTAAACCATGAAAGGTGTACCTGTTTCTGTTTGTGCTTGTAAAATGGCATACCATA 234444 Query 66192 GAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGT 66251 | || || | || |||| | ||||| | ||||||| | || || | Sbjct 234445 ACTTTTGGGCTTTAATGGTTT-TACCACG--ACCTTCCCTTTCGTAACGGGTATATAGCT 234501 Query 66252 GTTCGAAGGATTCACCCCATACTTCGGACAGACATGGA-CACTTGTGTGGACACATCAGC 66310 ||| || |||||||| || || | || ||| || || ||| | | | Sbjct 234502 CTTCAAATTCGTCACCCCAGACATCATCTAAACCTGGGGCAGCACTG-GGAGAAAATAAA 234560 Query 66311 GACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAG 66370 | ||| |||||||| || ||||| |||||| || ||||| ||||| || || | Sbjct 234561 GTCCAGGGACCATCCTCTTGAACACGTTTCATAAAAAGGTCAGGAATCCACAGAGCAGGG 234620 Query 66371 AAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCA 66430 || | ||| | ||| || || || | || || |||| | | |||| || || Sbjct 234621 AATAAATCCCTTGCACGAATTTCTTCTTTACCATGGGTTTTTCTAATATCGACAAAGTCG 234680 Query 66431 AAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCA 66490 ||||| || || ||||||||||||| | | | ||| || | || | ||| || Sbjct 234681 AAGATATCTGCGTGCCATGGTTCCAAGAAAAGGGCAAAGGCACCAGGTCTCTTGTTACCT 234740 Query 66491 CCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTA 66550 |||||||| || || ||||| ||||||||| ||||| | ||| || | | ||| || Sbjct 234741 CCTTGGTCCACATAACGAGCAGTATTGTTGAAAACACGAATCATAGGAATCAACCCATTT 234800 Query 66551 GATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGA 66610 || | || ||||| ||| |||| || ||| | || || | || || || ||| Sbjct 234801 GAAGTACCGTTGGTACCGGCGATATAAGAACCTGTGGAACGGATGTTGTTAATATGAAGA 234860 Query 66611 CCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCG 66670 |||| |||||| || ||||| || || |||||| || || || | || || Sbjct 234861 CCAACACCACCTGCAGTCTTGGAAATCATAGCACATTCTTTCAAAGTATCATAAATACCT 234920 Query 66671 TCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTG 66730 ||||| |||||| |||| |||| | ||| | |||||| | |||||| | || || Sbjct 234921 TCAATAGAGTCATCCTTCATGGCAATTAGGAAACATGAAGACATTTGGGGGTGTGGAGTA 234980 Query 66731 GCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTAC 66790 | || || | ||| || | |||||| || || || ||||| ||||||| Sbjct 234981 CCAGCGTTAAATAAGGTTGGGGAAGCGTGAGTGAAATATCTTAATGACATCAAATTGTAG 235040 Query 66791 GTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGAG 66849 |||| | |||| ||| || | || || || || || | |||| ||||| | | Sbjct 235041 GTCTTCAGCACAGAATCGATATCACTACCGTGGATACCTAGCGCCACA-CGCATAACCAA 235099 Query 66850 GTATTGAGGCCGTTCGACCA----GCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCA 66905 || || |||||||| ||| ||| || | || || || || || || |||| Sbjct 235100 GTGCTGTGGCCGTTCTGCCACTTCACCGTTCAGTCTTA-GC---AAATACGAACGCTCCA 235155 Query 66906 GGGTCTTGATACCAAAGTACGAGTAATTGAAATCGTTAGCATGCACGATGGCC 66958 ||||||| ||||| |||| || |||||||| || | | |||||||||| Sbjct 235156 AAGTCTTGAACCCAAAATACGTATACTTGAAATCTCTATCGTACACGATGGCC 235208 >seq5 Length=565208 Score = 158 bits (174), Expect = 1e-33 Identities = 961/1527 (63%), Gaps = 41/1527 (3%) Strand=Plus/Minus Query 65429 ACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAG 65488 |||||||| || ||||| | ||||||||| || || ||||| || | |||||||| Sbjct 296748 ACTTGGAATTCACCGGATAAGACACGACGGGAGTACATATTGGAGGTAACTGGTTCAAAA 296689 Query 65489 GATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAAT 65548 ||||| | | || | ||||||| || |||||||| ||||| || || | ||| Sbjct 296688 CATTCATTATAACCCAATATTTGGGACGTGGATGCAGTAGGCATTGGTGCCATGGTCAAA 296629 Query 65549 GAGTTTCGCAATCCGTTCATTTCA--ATGTTGTGACGCAATTCGTCCCAGTTCCACATC- 65605 ||||||| | || | | |||| | | | | ||| ||||| | |||||| Sbjct 296628 GAGTTTCTAATACCATGC--TTCATGACATCTTCCCTCAAAGTATCCCAATCCCACATGC 296571 Query 65606 -----GGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGG 65660 ||||| | ||| ||||||||| || || | || | | Sbjct 296570 CGTAGGGTTTTTGGTC------------CCACATATCGAACTGAAGTATACCTTGAGAAG 296523 Query 65661 CCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCT 65720 | || ||||| |||| | ||||| ||| |||| | || |||| ||| | | Sbjct 296522 CTGGAGAACCTTGGAAGGTTTCGTATGGTCCGTCCTTTTGAGCTAGTTCACAAGAAGCTT 296463 Query 65721 CGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGC 65780 | | | |||| |||||| || || || || | ||| ||| ||| ||||| || Sbjct 296462 CCATAGAGGCATGATAAATTGTTTCAAAGATTTGGATATTTAGTAAACGGGCCTCTTCAG 296403 Query 65781 TCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGA 65840 || | || | || | || | |||||||| |||| ||||||||| || | | | | Sbjct 296402 AATCAAAGGGTAAACGTAGCAACATGAAAGTGTCAGCCAAACCTTGAACACCCAAAGCAA 296343 Query 65841 TGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGA 65900 | || | ||| | || |||||| | | |||| || |||||||||||||| ||| | Sbjct 296342 TTGGTCTATGTCTCATATTGGATCTTTTCGCTTCTTCAACAGGGTAGTAATTACGATCAA 296283 Query 65901 TAATGCGATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATCA 65959 ||| | || ||||| || || || || | | || ||| | |||| || ||| | Sbjct 296282 TAACTCTGTTTAAATTACGAGTAACAACTTTGGCAATTTCGT-GTAATTTTTTGAAGTTG 296224 Query 65960 AAATGTTTAGGACGATCGGGAGTGC-CGGACACCACAA--ACT--TGGGAAGGGCAAGAG 66014 | | ||| | | | || || | | ||| ||| | | ||| |||| ||| || Sbjct 296223 TA---TGTAGAA-GTTTGGCCGTCCTCTGACGTTTCAATGAATGCTGGCAAGG-CAACAG 296169 Query 66015 ATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACA 66074 | || | ||| || ||||| | ||||| ||||| | ||||| |||||||| ||| | Sbjct 296168 AAGCCAAGTTACAAACAGCAGTTTCGTCCGGAGCTGAGTACTCAACAATTTCACAGCATA 296109 Query 66075 -GATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCC 66133 | || || | || || || || | ||| ||| ||| | ||||| |||||| Sbjct 296108 AGTTTGATGACTTG-ATAACACCTAAGTTTTTTTGGTTAGACTTTCTGTTGCAAGCATCC 296050 Query 66134 TTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGA 66193 || || | | | || || || || ||| ||| | || | |||| | ||| | Sbjct 296049 TTATAAACGACAAAAGGTGTACCCGTTTCAGTTTGTGCTTCCAAAATGGAATACCATAAT 295990 Query 66194 GCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGT 66253 | ||||| | || | |||| | ||||| |||||| | || || | Sbjct 295989 TTTTGAGCCTTAATGGT-CTTACCACG--ACCTTCTTTTTCGTAGCGGGTATATAGAGCT 295933 Query 66254 TCGAAGGATTCACCCCATACTTCGGACAGACATGGA-CACTTGTGTGGACACATCAGCGA 66312 || || || || | ||| |||| ||| | ||| |||| | | || | Sbjct 295932 TCAAACTCGTCGCCATAACAGTCGCTTAGACCAGGAGCGGCTGT-TGGAGAGAACAAAGT 295874 Query 66313 CCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAA 66372 |||| |||| || ||| ||||| ||| || |||||||| ||||| || || || Sbjct 295873 CCAAGTCCCATTCTCTTCAACACGCTTCATGAAAAGATCAGGAATCCATAGAGCAGGAAA 295814 Query 66373 GAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAA 66432 | ||| | ||| || || || | ||||| || || | | || | || ||||| Sbjct 295813 CAAATCTCTTGCACGAATTTCTTCTTTACCGTGGTTCTTTCTGATATCAATAAAATCAAA 295754 Query 66433 GATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACC 66492 || || |||||||||||||||||||| | ||| || | ||| | |||| ||||| Sbjct 295753 AATATCAGCATGCCATGGTTCCAGGTACAGGGCAAAGGCGCCAGGTCTTTTGTTACCACC 295694 Query 66493 TTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGA 66552 |||||||| || || ||| || || || ||||| | ||| || | | ||||||||| Sbjct 295693 CTGGTCGACATAACGGGCGGTGTTATTAAAAACACGAATCATGGGAATTAACCCGTTAGA 295634 Query 66553 TTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACC 66612 | || || || || | ||| || || || || |||| || | || ||||| Sbjct 295633 GGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATATTATGGATATGTAGACC 295574 Query 66613 AATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTC 66672 ||||||||| || || || || || |||||| || || || | | || || || Sbjct 295573 AATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTGTCGTAAATACCCTC 295514 Query 66673 AATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGC 66732 || ||||| |||| |||| | | | | || || | ||| ||||| || || | Sbjct 295513 GATAGAGTCCTCCTTCATGGCGACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACC 295454 Query 66733 GGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGT 66792 || || | || || | || || |||||||| | ||||||| | || || || Sbjct 295453 AGCATTAAACAAAGTTGGAGAGGCATGAGTAAAGTATTTTAGAGACATTAAGTTATATGT 295394 Query 66793 CTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTA 66852 || | | || || |||| | ||| || || || ||||| || ||| | | || Sbjct 295393 TTCTAGAGCCGCTTCGATGTCTCTGCCGTGGATGCCCAGTGCGACTCTCATAATTAAGTG 295334 Query 66853 TTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTT 66912 ||| || |||||| ||| || | ||||| | ||| || || ||||||| || || Sbjct 295333 TTGTGGACGTTCGGCCACTTGACCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTT 295274 Query 66913 GATACCAAAGTACGAGTAATTGAAATC 66939 || |||||| || ||| | |||||| Sbjct 295273 GAAACCAAAATAACTGTACTGGAAATC 295247 >seq10 Length=743843 Score = 109 bits (120), Expect = 4e-19 Identities = 277/418 (66%), Gaps = 10/418 (2%) Strand=Plus/Plus Query 61213 GCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAG 61272 || || || |||||||| |||||||| || ||||| || || | ||| ||| | Sbjct 391012 GCCTTTTTCGCCGCTTCTGACGGTATTGTTAATGAAAACTTGGTTGAAAACTTCTCCACC 391071 Query 61273 GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTC 61332 || || ||||| | ||||| ||||||| || ||||| || || || ||| | Sbjct 391072 GAAGTTCAAGTTCCAGAGGCAAAGAGTTTCTATGGTTTCCAAATCATGATTGAAAATATT 391131 Query 61333 CACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAA 61392 || || || | ||| | | |||||||| ||||||| ||| | |||| ||||| Sbjct 391132 CATTCTGAAACCTACTCCTTGTTGATCGATACCTACATCAAGGACCCTAAGGAAAGTGAA 391191 Query 61393 CGATTGTTCAATGCCATCGAGACGATACCGG----CGGTGAAGCGGAAAGCGGATTGGGC 61448 |||||||||||||| | || || || | |||||| ||| || || ||||| Sbjct 391192 TTCTTGTTCAATGCCATTCACACCATCCCAGAAATCGGTGA----GAAGGCCGAGTGGGC 391247 Query 61449 CTTCAATTGGA-TCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGG 61507 | | |||| ||| | ||| || ||||||||| || | | || ||||| Sbjct 391248 TCTAAGATGGATTCAAGACGCTGACGCCT-TGTTTGGTGAAAGACTAGTCGCCTTTGCCT 391306 Query 61508 TGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTG 61567 |||| ||||| || ||| || || || ||| | || || ||||||||||| | | Sbjct 391307 CTATCGAAGGTGTCTTCTTCTCCGGTTCCTTCGCCTCCATTTTCTGGTTGAAGAAGAGAG 391366 Query 61568 GACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCA 61625 | | ||||||||| |||||||| || || ||||| | | ||||| || |||| Sbjct 391367 GTATGATGCCCGGTTTGACCTTCTCTAACGAATTGATTTGCAGAGACGAAGGTTTGCA 391424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567917628880