Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079085.1_202017-03- 21] 17 sequences; 11,881,637 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq9 181 8e-41 seq5 154 1e-32 seq10 105 5e-18 >seq9 Length=442403 Score = 181 bits (200), Expect = 8e-41 Identities = 981/1553 (63%), Gaps = 39/1553 (3%) Strand=Plus/Plus Query 65421 GATTGATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGG 65480 |||| | ||||||||| || || |||| |||||||| || ||||| || || | | Sbjct 239245 GATTAACGACTTGGAATTCACCAGACAAGACACGACGAGAGTACATGTTTGAAGTCACTG 239304 Query 65481 GTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGA 65540 |||| || |||| | | || |||||||| | ||| || ||||||||||| || || | Sbjct 239305 GTTCGAAACATTCGTTATATCCAAGAATTTGAGAAGTTGAGGCAGTTGGCATTGGCGCCA 239364 Query 65541 CCAACAATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCC 65600 ||| ||||||| ||||| | | |||||| | | || ||||| | || Sbjct 239365 TTGTCAAAGAGTTTCTTAATCCATGTTTGACAATGTCCTTTCTTAAGGTTTCCCAATCCC 239424 Query 65601 ACAT-CGGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTG 65659 |||| | | | | | ||| | ||||| || ||| || | || || | Sbjct 239425 ACATACCAAATGGCTTAG-CATTC------CACATGTCAAATTGTAGAATACCCTTAGAG 239477 Query 65660 GCCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTC 65719 || || ||||| |||| || ||| || |||| || || | || |||| || Sbjct 239478 GCTGGAGAACCTTCGAAAGTAGAATACTTACCTTCCTTCTGTGCCAATTCACAGGAGGCT 239537 Query 65720 TCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATT--AAGTTCACGTGCCTCAT 65777 || || | ||| ||||||||| |||||||| || || ||||| | || || | Sbjct 239538 TCAAGAGTAGCATGATAAATGGTTTCGAAAATCTGTTTGTTCAAAGTTT--GAGCTTCTT 239595 Query 65778 CGCTCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATAC 65837 | || | || | || || || | | | || ||||||||||||||||| || | Sbjct 239596 CTGATTCAAAAGGGAGACGCAGCATCATATAGGTATCGGCCAGACCTTGAACACCCAAGG 239655 Query 65838 CGATGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATAT 65897 | || || | ||| | || ||| ||| ||| || ||||| || || || ||||| | Sbjct 239656 CAATAGGTCTATGCCTCATATTTGAATTTCTGGCTTCAGGAACTGGATAATAATTACGGT 239715 Query 65898 CGATAATGCGATTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAAT 65957 |||| | | ||||| || | || | || | | || | || ||||||| Sbjct 239716 CGATGACTCTGTTCAAGTTATGGGTAATGACTTTAGCAATTTCATGTAAACTCTCGAAAT 239775 Query 65958 CAAAATGTTTAGG---ACGATCGGGAGTGCCGGACACC---ACAAACTTGGGAAGGGCAA 66011 | || | || || ||| || ||| | ||||| || ||||||| Sbjct 239776 TATAACTTGCAGTTTTACCATCTTCAG------ACATCTCGACAAATGCTGGGAGGGCAA 239829 Query 66012 GAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGC 66071 ||| || || || || || || | || || || | | ||||||||| ||||| | Sbjct 239830 TAGAGGCTAGATTACAAACGGCGGTTTCATCTGGGGAAGAATACTCGACGATTTCACAAC 239889 Query 66072 ACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCAT 66131 ||| || | ||||| ||||| |||||||| || |||| | || ||||| | Sbjct 239890 ACAAGTTGGATGATTTAATGGTACCCAAGTTCTGTTGGTTTGTCTTTCTGTTACATGCGT 239949 Query 66132 CCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAA 66191 ||||||| | |||| | || || || || || ||| | | | ||||| | ||| | Sbjct 239950 CCTTGTAAACCATGAAAGGTGTACCTGTTTCTGTTTGTGCTTGTAAAATGGCATACCATA 240009 Query 66192 GAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGT 66251 | || || | || |||| | ||||| | ||||||| | || || | Sbjct 240010 ACTTTTGGGCTTTAATGGTTT-TACCACG--ACCTTCCCTTTCGTAACGGGTATATAGCT 240066 Query 66252 GTTCGAAGGATTCACCCCATACTTCGGACAGACATGGA-CACTTGTGTGGACACATCAGC 66310 ||| || |||||||| || || | || ||| || || ||| | | | Sbjct 240067 CTTCAAATTCATCACCCCAGACATCATCTAAACCTGGGGCAGCACTG-GGAGAAAATAAA 240125 Query 66311 GACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAG 66370 | ||| ||||||| || ||||| |||||| || ||||| ||||| || || | Sbjct 240126 GTCCAGGGCCCATCCTCTTGAACACGTTTCATAAAAAGGTCAGGAATCCACAGAGCAGGG 240185 Query 66371 AAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCA 66430 || | ||| | ||| || || || | || || |||| | | |||| || || Sbjct 240186 AATAAATCCCTTGCACGAATTTCTTCTTTACCATGGGTTTTTCTAATATCGACAAAGTCG 240245 Query 66431 AAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCA 66490 ||||| || || ||||||||||||| | | | ||| || | || | ||| ||| Sbjct 240246 AAGATATCTGCGTGCCATGGTTCCAAGAAAAGGGCAAAGGCACCAGGTCTCTTGTTGCCT 240305 Query 66491 CCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTA 66550 |||||||| || || ||||| ||||||||| ||||| | ||| || | | ||| || Sbjct 240306 CCTTGGTCCACATAACGAGCAGTATTGTTGAAAACACGAATCATAGGAATCAACCCATTT 240365 Query 66551 GATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGA 66610 || | || ||||| ||| |||| || ||| | || || | || || || ||| Sbjct 240366 GAAGTACCGTTGGTACCGGCGATATAAGAACCTGTGGAACGGATGTTGTTAATATGAAGA 240425 Query 66611 CCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCG 66670 |||| |||||| || ||||| || || |||||| || || || | || || Sbjct 240426 CCAACACCACCTGCAGTCTTGGAAATCATAGCACATTCTTTCAAAGTATCATAAATACCT 240485 Query 66671 TCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTG 66730 ||||| |||||| |||| |||| | ||| | |||||| | |||||| | || || Sbjct 240486 TCAATAGAGTCATCCTTCATGGCAATTAGGAAACATGAAGACATTTGGGGGTGTGGAGTA 240545 Query 66731 GCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTAC 66790 | || || | ||| || | |||||| || || || ||||| ||||||| Sbjct 240546 CCAGCGTTAAATAAGGTTGGGGAAGCGTGAGTGAAATATCTTAATGACATCAAATTGTAG 240605 Query 66791 GTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGAG 66849 |||| | |||| ||| || | || || || || || | |||| ||||| | | Sbjct 240606 GTCTTCAGCACAGAATCGATATCACTACCGTGGATACCTAGCGCCACA-CGCATAACCAA 240664 Query 66850 GTATTGAGGCCGTTCGACCA----GCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCA 66905 || || |||||||| ||| ||| || | || || || || || || |||| Sbjct 240665 GTGCTGTGGCCGTTCTGCCACTTCACCGTTCAGTCTTA-GC---AAATACGAACGCTCCA 240720 Query 66906 GGGTCTTGATACCAAAGTACGAGTAATTGAAATCGTTAGCATGCACGATGGCC 66958 ||||||| ||||| |||| || |||||||| || | | |||||||||| Sbjct 240721 AAGTCTTGAACCCAAAATACGTATACTTGAAATCTCTATCGTACACGATGGCC 240773 >seq5 Length=553973 Score = 154 bits (170), Expect = 1e-32 Identities = 958/1526 (63%), Gaps = 39/1526 (3%) Strand=Plus/Minus Query 65429 ACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAG 65488 |||||||| || ||||| | ||||||||| || || ||||| || | |||||||| Sbjct 295438 ACTTGGAATTCACCGGATAAGACACGACGGGAGTACATATTGGAGGTAACTGGTTCAAAA 295379 Query 65489 GATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAAT 65548 ||||| | | || | ||||||| || |||||||| ||||| || || | ||| Sbjct 295378 CATTCATTATAACCCAATATTTGGGATGTGGATGCAGTAGGCATTGGTGCCATGGTCAAA 295319 Query 65549 GAGTTTCGCAATCCGTTCATTTCA--ATGTTGTGACGCAATTCGTCCCAGTTCCACATC- 65605 ||||||| | || | | |||| | | | | ||| ||||| | |||||| Sbjct 295318 GAGTTTCTAATACCATGC--TTCATGACATCTTTCCTCAAAGTATCCCAATCCCACATGC 295261 Query 65606 -----GGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGG 65660 ||||| | ||| ||||||||| || || | || | | Sbjct 295260 CGTAGGGTTTTTGGTC------------CCACATATCGAACTGAAGTATACCTTGAGAAG 295213 Query 65661 CCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCT 65720 | || ||||| |||| | ||||| ||| |||| | || |||| ||| | | Sbjct 295212 CTGGAGAACCTTGGAAGGTTTCGTATGGTCCGTCCTTTTGAGCTAGTTCACAAGAAGCTT 295153 Query 65721 CGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGC 65780 | | | |||| |||||| || || || || | ||| ||| ||| ||||| || Sbjct 295152 CCATAGAGGCATGATAAATTGTTTCAAAGATTTGGATATTTAGTAAACGGGCCTCTTCAG 295093 Query 65781 TCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGA 65840 || | || | || | || | |||||||| |||| ||||||||| || | | | | Sbjct 295092 AATCAAAGGGTAAACGTAGCAACATGAAAGTGTCAGCCAAACCTTGAACACCCAAAGCAA 295033 Query 65841 TGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGA 65900 | || | ||| | || |||||| | |||||| || |||||||||||||| ||| | Sbjct 295032 TTGGTCTATGTCTCATATTGGATCTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAA 294973 Query 65901 TAATGCGATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATCA 65959 ||| | || ||||| || || || || | | || ||| | |||| || ||| | Sbjct 294972 TAACTCTGTTTAAATTACGAGTAACAACTTTGGCAATTTCGT-GTAATTTTTTGAAGTTG 294914 Query 65960 AAATGTTTAGGACGATCGGGAGTGC-CGGACACCACAA---ACTTGGGAAGGGCAAGAGA 66015 | | ||| | | | || || | | ||| ||| || || | ||||| ||| Sbjct 294913 TA---TGTAGAA-GTTTGGCCGTCCTCTGACGTTTCAATGAACGCTGGCAAGGCAACAGA 294858 Query 66016 TGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACA- 66074 || | ||| || ||||| | ||||| ||||| | ||||| |||||||| ||| | Sbjct 294857 AGCCAAGTTACAAACAGCAGTTTCGTCCGGAGCTGAGTACTCAACAATTTCACAGCATAA 294798 Query 66075 GATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCT 66134 | || || | ||| || || || | ||| ||| ||| | ||||| ||||| | Sbjct 294797 GTTTGATGACTTG-ATGACACCTAAGTTTTTTTGGTTAGACTTTCTGTTGCAAGCATCTT 294739 Query 66135 TGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAG 66194 | || | | | || || || || ||| ||| | || | |||| | ||| | Sbjct 294738 TATAAACGACAAAAGGTGTACCCGTTTCAGTTTGTGCTTCCAAAATGGAATACCATAATT 294679 Query 66195 CGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTT 66254 | ||||| | || | |||| | ||||| |||||| | || || || Sbjct 294678 TTTGAGCCTTAATGGT-CTTACCACG--ACCTTCTTTTTCGTAGCGGGTATATAGAGCTT 294622 Query 66255 CGAAGGATTCACCCCATACTTCGGACAGACATGGA-CACTTGTGTGGACACATCAGCGAC 66313 | || || || | ||| |||| ||| | ||| |||| | | || | | Sbjct 294621 CAAACTCGTCGCCGTAACAGTCGCTTAGACCAGGAGCGGCTGT-TGGAGAGAACAAAGTC 294563 Query 66314 CAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAG 66373 ||| |||| || ||| ||||| ||| || ||||| || ||||| || || || Sbjct 294562 CAAGTCCCATTCTCTTCGACACGCTTCATGAAAAGATCGGGAATCCATAGAGCAGGAAAC 294503 Query 66374 AGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAG 66433 | ||| | ||| || || || | ||||| || || | | || | || ||||| Sbjct 294502 AAATCTCTTGCACGAATTTCTTCTTTACCGTGGTTCTTTCTGATATCAATAAAATCAAAA 294443 Query 66434 ATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCT 66493 || || |||||||||||||||||||| | ||| || | ||| | |||| ||||| Sbjct 294442 ATATCAGCATGCCATGGTTCCAGGTACAGGGCAAAGGCGCCAGGTCTTTTGTTACCACCC 294383 Query 66494 TGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGAT 66553 |||||||| || || ||| || || || ||||| | ||| || | | ||||||||| Sbjct 294382 TGGTCGACATAACGGGCGGTGTTATTAAAAACACGAATCATGGGAATTAACCCGTTAGAG 294323 Query 66554 TTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCA 66613 | || || || || | ||| || || || || |||| || | || |||||| Sbjct 294322 GTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATATTATGGATATGTAGACCA 294263 Query 66614 ATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCA 66673 |||||||| || || || || || |||||| || || || | | || || || Sbjct 294262 ATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTGTCGTAAATACCCTCG 294203 Query 66674 ATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCG 66733 || ||||| |||| |||| | | | | || || | ||| ||||| || || | Sbjct 294202 ATAGAGTCCTCCTTCATGGCGACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCA 294143 Query 66734 GCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTC 66793 || || | || || | || || |||||||| | ||||||| | || || || Sbjct 294142 GCATTAAACAAAGTTGGAGAGGCATGAGTAAAGTATTTTAGAGACATTAAGTTATATGTT 294083 Query 66794 TCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTAT 66853 || | | || || |||| | || || || || ||||| || ||| | | || | Sbjct 294082 TCTAGAGCCGCCTCGATGTCTCTACCGTGGATGCCCAGTGCGACTCTCATAATTAAGTGT 294023 Query 66854 TGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTG 66913 || || |||||| ||| || | ||||| | ||| || || ||||||| || || Sbjct 294022 TGTGGACGTTCGGCCACTTGACCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTA 293963 Query 66914 ATACCAAAGTACGAGTAATTGAAATC 66939 | ||||||||| ||| | |||||| Sbjct 293962 AAACCAAAGTAACTGTACTGGAAATC 293937 >seq10 Length=729272 Score = 105 bits (116), Expect = 5e-18 Identities = 276/418 (66%), Gaps = 10/418 (2%) Strand=Plus/Plus Query 61213 GCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAG 61272 || || || |||||||| |||||||| || ||||| || || | ||| ||| | Sbjct 389903 GCCTTTTTCGCCGCTTCTGACGGTATTGTTAATGAAAACTTGGTTGAAAACTTCTCCACC 389962 Query 61273 GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTC 61332 || || ||||| | ||||| ||||||| || ||||| || || || ||| | Sbjct 389963 GAAGTTCAAGTTCCAGAGGCAAAGAGTTTCTATGGTTTCCAAATCATGATTGAAAATATT 390022 Query 61333 CACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAA 61392 || || || | ||| | | |||||||| ||||| | ||| | |||| ||||| Sbjct 390023 CATTCTGAAACCTACTCCTTGTTGATCGATACCTACATTAAGGACCCTAAGGAAAGTGAA 390082 Query 61393 CGATTGTTCAATGCCATCGAGACGATACCGG----CGGTGAAGCGGAAAGCGGATTGGGC 61448 |||||||||||||| | || || || | |||||| ||| || || ||||| Sbjct 390083 TTTTTGTTCAATGCCATTCACACCATCCCAGAAATCGGTGA----GAAGGCCGAGTGGGC 390138 Query 61449 CTTCAATTGGA-TCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGG 61507 | | |||| ||| | ||| || ||||||||| || | | || ||||| Sbjct 390139 TCTAAGATGGATTCAAGACGCTGACGCCT-TGTTTGGTGAAAGACTAGTCGCCTTTGCCT 390197 Query 61508 TGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTG 61567 |||| ||||| || ||| || || || ||| | || || ||||||||||| | | Sbjct 390198 CTATCGAAGGTGTCTTCTTCTCCGGTTCCTTCGCCTCCATTTTCTGGTTGAAGAAGAGAG 390257 Query 61568 GACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCA 61625 | | ||||||||| |||||||| || || ||||| | | ||||| || |||| Sbjct 390258 GTATGATGCCCGGTTTGACCTTCTCTAACGAATTGATTTGCAGAGACGAAGGTTTGCA 390315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567917628880