Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079115.1_202017-03- 21] 17 sequences; 11,883,118 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq9 188 6e-43 seq5 150 1e-31 seq10 100 2e-16 >seq9 Length=431692 Score = 188 bits (208), Expect = 6e-43 Identities = 982/1557 (63%), Gaps = 49/1557 (3%) Strand=Plus/Plus Query 65421 GATTGATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGG 65480 |||| | ||||||||| || || |||| |||||||| || ||||| || || | | Sbjct 226186 GATTAACGACTTGGAATTCACCAGACAAGACACGACGAGAGTACATGTTTGAAGTCACTG 226245 Query 65481 GTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGA 65540 ||||||| |||| | | || |||||||| | ||| || ||||||||||| || || | Sbjct 226246 GTTCAAAACATTCGTTATACCCAAGAATTTGAGAAGTCGAGGCAGTTGGCATTGGCGCCA 226305 Query 65541 CCAACAATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCC 65600 || ||||||| ||||| | | |||||| | | || ||||| | || Sbjct 226306 TTGTTAAAGAGTTTCTTAATCCATGTTTGACAATGTCCTTTCTTAAGATTTCCCAATCCC 226365 Query 65601 ACATC------GGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGA 65654 |||| || ||| ||| |||||| || ||| || | || Sbjct 226366 ACATACCAAATGGCTTAGCGTT------------CCACATGTCAAATTGTAGAATACCCT 226413 Query 65655 TACTGGCCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGC 65714 || ||| || ||||| |||| | ||| || |||| || || | || |||| Sbjct 226414 TAGAGGCTGGAGAACCTTCGAAAGTGGAATACTTACCTTCCTTCTGTGCCAATTCACAGG 226473 Query 65715 TGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATT--AAGTTCACGTGC 65772 || || || | ||| ||| ||||| |||||||| || || ||||| | || Sbjct 226474 AGGCTTCAAGAGTAGCATGATAGATGGTTTCGAAAATCTGTTTGTTCAAAGTTT--GAGC 226531 Query 65773 CTCATCGCTCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCC 65832 || || || | || | || || || | | | || ||||||||||||||||| || Sbjct 226532 TTCTTCCGATTCAAAGGGTAGACGCAACATCATATAGGTATCGGCCAGACCTTGAACACC 226591 Query 65833 AATACCGATGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATT 65892 | | || || | ||| || ||| ||| ||| || ||||| || || || ||||| Sbjct 226592 CAAGGCAATAGGTCTATGCTTCATATTTGAATTTCTGGCTTCAGGAACTGGATAATAATT 226651 Query 65893 GATATCGATAATGCGATTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTC 65952 |||||| | | ||||| || | || | || | | || | || || Sbjct 226652 ACGATCGATGACTCTGTTCAAGTTATGGGTAATTACTTTAGCAATTTCATGTAAACTCTC 226711 Query 65953 GAAATCAAAATGTTTAGG---ACGATCGGGAGTGCCGGACACC---ACAAACTTGGGAAG 66006 ||||| | || | || || ||| || ||| | ||||| || || Sbjct 226712 GAAATTATAACTTGCAGTTTTACCATCTTCAG------ACATCTCGACAAATGCTGGGAG 226765 Query 66007 GGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTC 66066 ||||| ||| || || || || || || | || || || | || ||||||||| ||||| Sbjct 226766 GGCAATAGAGGCTAGATTACAAACGGCGGTTTCATCTGGGGAGGAATACTCGACGATTTC 226825 Query 66067 GGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCA 66126 |||| ||| | ||||| ||||| |||||||| || |||| | ||| || Sbjct 226826 ACAACACAAATTGGATGATTTAATGGTACCCAAGTTCTGTTGGTTTGTCTTTCTATTACA 226885 Query 66127 TGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTG 66186 || |||||||| | |||| | || || || || || ||| | | | || || | Sbjct 226886 TGAGTCCTTGTAAACCATGAAAGGTGTACCTGTTTCTGTTTGTGCTTGTAAAATTGCATA 226945 Query 66187 CCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTA 66246 ||| | | ||||| | || |||| | ||||| | ||||||| | || Sbjct 226946 CCATAACTTTTGGGCCTTAATGGTTT-TACCACG--ACCTTCCCTTTCGTAACGGGTATA 227002 Query 66247 GAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGA-CACTTGTGTGGACACA 66305 || | ||| || |||||||| || || | || ||| || || ||| | | Sbjct 227003 TAGCTCTTCAAATTCATCACCCCAGACATCATCTAAACCTGGGGCAGCACTG-GGAGAAA 227061 Query 66306 TCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGG 66365 | | ||| ||||||| || ||||| |||||| || ||||| ||||| || | Sbjct 227062 ATAAAGTCCAGGGCCCATCCTCTTGAACACGTTTCATAAAAAGGTCAGGAATCCACAGAG 227121 Query 66366 CGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGA 66425 | ||| | ||| | ||| || || || | || || |||| | | |||| | Sbjct 227122 CAGGGAACAAATCCCTTGCACGGATTTCTTCTTTACCATGGGTTTTTCTAATATCGACAA 227181 Query 66426 ACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGC 66485 | || ||||| || |||||||||||||||| | | | ||| || | ||| | ||| Sbjct 227182 AGTCGAAGATATCTGCATGCCATGGTTCCAAGAAAAGGGCAAAGGCGCCAGGTCTCTTGT 227241 Query 66486 CGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCC 66545 || |||||||| || || ||||| ||||||||| ||||| | ||| || | | || Sbjct 227242 TACCTCCTTGGTCCACATAACGAGCAGTATTGTTGAAAACACGGATCATAGGAATCAACC 227301 Query 66546 CGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACAT 66605 | || || | || ||||| ||| |||| || ||| | || || | || || || Sbjct 227302 CATTTGAAGTACCGTTGGTACCGGCGATATAAGAACCTGTGGAACGGATGTTGTTAATAT 227361 Query 66606 TCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATA 66665 ||||||| |||||| || ||||| || || |||||| || || || | | Sbjct 227362 GAAGACCAACACCACCTGCAGTCTTGGAAATCATAGCACATTCTTTCAAAGTATCATAAA 227421 Query 66666 TGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGG 66725 | || ||||| |||||| |||| |||| | ||| | |||||| | |||||| | | Sbjct 227422 TACCTTCAATAGAGTCATCCTTCATGGCAATTAGGAAACATGAAGACATTTGGGGATGTG 227481 Query 66726 GTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAAT 66785 | || | || ||| | ||| || | |||||| || || || ||||| ||| Sbjct 227482 GAGTACCAGCGTTGAATAAGGTTGGGGAAGCGTGAGTGAAATATCTTAACGACATCAAAT 227541 Query 66786 TGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATC 66844 |||| |||| | |||| ||||| | || || || || || | |||| ||||| Sbjct 227542 TGTAGGTCTTCAGCACAGACTCAATATCACTACCGTGGATACCCAGCGCCACA-CGCATA 227600 Query 66845 AGGAGGTATTGAGGCCGTTCGACCA----GCCGATCCTTGATATGCATTAAGTAGGAGCG 66900 | | || || |||||||| ||| ||| || | || || || || || || Sbjct 227601 ACCAAGTGCTGTGGCCGTTCAGCCACTTCACCGTTCAGTCTTA-GC---AAATACGAACG 227656 Query 66901 TTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATCGTTAGCATGCACGATGGC 66957 |||| ||||||| ||||| |||| || |||||||| || | | ||||||||| Sbjct 227657 CTCCAAAGTCTTGAACCCAAAATACGTATACTTGAAATCTCTATCGTACACGATGGC 227713 >seq5 Length=571131 Score = 150 bits (166), Expect = 1e-31 Identities = 958/1525 (63%), Gaps = 37/1525 (2%) Strand=Plus/Minus Query 65429 ACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAG 65488 |||||||| || ||||| | ||||||||| || |||||||| || | |||||||| Sbjct 299255 ACTTGGAATTCACCGGATAAGACACGACGGGAGTACATGTTGGAGGTAACTGGTTCAAAA 299196 Query 65489 GATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAAT 65548 ||||| | | || | ||||||| || ||||| || ||||| || || | ||| Sbjct 299195 CATTCATTATAACCCAATATTTGGGATGTGGATGCGGTAGGCATTGGTGCCATGGTCAAA 299136 Query 65549 GAGTTTCGCAATCCGTTCATTTCA--ATGTTGTGACGCAATTCGTCCCAGTTCCACATC- 65605 ||||||| | || | ||||| || | | | ||| |||||| | |||||| Sbjct 299135 GAGTTTCTAATACCATG--TTTCATGATATCTTTCCTCAAAGTGTCCCAATCCCACATGC 299078 Query 65606 ----GGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGC 65661 || || | | |||| |||||||| || || | || | || Sbjct 299077 CGTAGGGTTTTTG-----ATCC------CACATATCGAACTGAAGTATACCTTGAGAAGC 299029 Query 65662 CGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTC 65721 || ||||| |||| | ||||| || |||| | || |||| ||| | || Sbjct 299028 TGGAGAACCTTGGAAGGTTTCGTATGGGCCGTCCTTTTGAGCTAGTTCACAAGAAGCTTC 298969 Query 65722 GAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCT 65781 | | |||| |||||| || || || || | ||| ||| ||| ||||| || Sbjct 298968 CATGGAGGCATGATAAATTGTTTCAAATATTTGGATATTTAGTAAACGGGCCTCTTCAGA 298909 Query 65782 CTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGAT 65841 || | || | || | || | ||||||||| || | ||||||||| || | | || Sbjct 298908 ATCAAAGGGTAAACGTAGCAACATAAAAGTGTCAGCTAAACCTTGAACACCCAAGGCAAT 298849 Query 65842 GGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGAT 65901 || | ||| | || |||||| | |||||| || |||||||||||||| ||| || Sbjct 298848 TGGTCTATGTCTCATATTGGATCTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAAT 298789 Query 65902 AATGCGATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATCAA 65960 || | || ||||| || || || || | | || ||| | |||| || ||| | Sbjct 298788 AACTCTGTTTAAATTACGAGTAACAACTTTGGCAATTTCGT-GTAATTTTTTGAAGTTGT 298730 Query 65961 AATGTTTAGGACGATCGGGAGTGC-CGGACACCACAA---ACTTGGGAAGGGCAAGAGAT 66016 || ||| | | | || || | | ||| ||| || || | ||||| || Sbjct 298729 AAG---TAGAA-GTTTGGCCGTCCTCTGACGTTTCAATGAACGCTGGCAAGGCAACGGAA 298674 Query 66017 GCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACA-G 66075 || | ||| || ||||| | ||||| ||||| | ||||| |||||||| ||| | | Sbjct 298673 GCCAAGTTACAAACAGCAGTTTCGTCCGGAGCTGAGTACTCAACAATTTCACAGCATAAG 298614 Query 66076 ATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTT 66135 || || | || ||||| || | ||| ||| ||| | ||||| ||||| || Sbjct 298613 TTTGATGACTTG-ATAACACCCAAGTTTTTTTGGTTAGACTTTCTGTTGCAAGCATCTTT 298555 Query 66136 GTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGC 66195 || | || | || || || || ||| ||| | || | |||| | ||| | Sbjct 298554 ATAAACCACAAAAGGTGTACCCGTTTCAGTTTGTGCTTCCAAAATGGAATACCATAATTT 298495 Query 66196 GCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTC 66255 | || || | || | |||| | ||||| |||||| | || || ||| Sbjct 298494 TTGAGCTTTAATGGT-CTTACCACG--ACCTTCTTTTTCGTAGCGGGTATATAGAGCTTC 298438 Query 66256 GAAGGATTCACCCCATACTTCGGACAGACATGGA-CACTTGTGTGGACACATCAGCGACC 66314 || ||||| | ||| |||| ||| | ||| |||| | | || | || Sbjct 298437 AAACTCGTCACCGTAACAGTCGCTTAGACCGGGAGCGGCTGT-TGGAGAGAACAAAGTCC 298379 Query 66315 AATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGA 66374 || |||| || ||| ||||| ||| || |||||||| ||||| || || || | Sbjct 298378 AAGTCCCATTCTCTTCGACACGCTTCATGAAAAGATCAGGAATCCACAGAGCAGGAAACA 298319 Query 66375 GATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGA 66434 ||| | ||| || || || | ||||| || || | | || | || ||||||| Sbjct 298318 AATCTCTTGCACGAATTTCTTCTTTACCGTGGTTCTTTCTGATATCAATAAAATCAAAGA 298259 Query 66435 TGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTT 66494 | || |||||||||||||||||||| | || || | || | |||| ||||| | Sbjct 298258 TATCAGCATGCCATGGTTCCAGGTACAGAGCAAAGGCACCAGGTCTTTTGTTACCACCCT 298199 Query 66495 GGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATT 66554 ||||||| || || ||| ||| || || ||||| | ||| || | | ||||||||| Sbjct 298198 GGTCGACATAACGGGCGGTATTATTAAAAACACGAATCATGGGAATTAACCCGTTAGAAG 298139 Query 66555 TGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAA 66614 | || || || || | ||| || || || || || | || | || ||||||| Sbjct 298138 TACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAA 298079 Query 66615 TACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAA 66674 ||||||| || || || || || |||||| || || || | | || || || | Sbjct 298078 TACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTGTCGTAAATACCCTCGA 298019 Query 66675 TGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGG 66734 | ||||| |||| |||| | | | | || || | ||| ||||| || || | | Sbjct 298018 TAGAGTCCTCCTTCATGGCGACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCAG 297959 Query 66735 CCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCT 66794 | || | || || | || || |||||||| | ||||||| | || || || | Sbjct 297958 CATTAAACAAAGTTGGAGAGGCATGAGTAAAGTATTTTAGAGACATTAAGTTATATGTTT 297899 Query 66795 CGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATT 66854 | | |||| || |||| | || || || || ||||| || ||| | | || || Sbjct 297898 CTAGAGCAGCTTCGATGTCTCTACCGTGGATGCCCAGTGCGACTCTCATAATTAAGTGTT 297839 Query 66855 GAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGA 66914 | || |||||| ||| | | ||||| | ||| || || ||||||| || |||| Sbjct 297838 GTGGACGTTCGGCCACTTGGCCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTGA 297779 Query 66915 TACCAAAGTACGAGTAATTGAAATC 66939 |||||| || ||| | |||||| Sbjct 297778 AACCAAAATAACTGTACTGGAAATC 297754 >seq10 Length=707288 Score = 100 bits (110), Expect = 2e-16 Identities = 275/418 (66%), Gaps = 10/418 (2%) Strand=Plus/Plus Query 61213 GCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAG 61272 || || || |||||||| |||||||| || ||||| || || | ||| ||| | Sbjct 370938 GCCTTTTTCGCCGCTTCTGACGGTATTGTTAATGAAAACTTGGTTGAAAACTTCTCCACC 370997 Query 61273 GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTC 61332 || || ||| | | ||||| ||||||| || ||||| || || || ||| | Sbjct 370998 GAAGTTCAAATTCCAGAGGCAAAGAGTTTCTATGGTTTCCAAATCATGATTGAAAATATT 371057 Query 61333 CACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAA 61392 || || || | ||| | | |||||||| ||||||| ||| | |||| ||||| Sbjct 371058 CATTCTGAAACTTACTCCTTATTGATCGATACCTACATCAAGGACCCTAAGGAAAGTGAA 371117 Query 61393 CGATTGTTCAATGCCATCGAGACGATACCGG----CGGTGAAGCGGAAAGCGGATTGGGC 61448 |||||||||||||| | || || || | |||||| ||| || || ||||| Sbjct 371118 TTCTTGTTCAATGCCATTCACACTATCCCAGAAATCGGTGA----GAAGGCCGAGTGGGC 371173 Query 61449 CTTCAATTGGA-TCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGG 61507 | | |||| ||| | ||| || ||||||||| || | | || ||||| Sbjct 371174 TCTAAGATGGATTCAAGACGCTGACGCCT-TGTTTGGTGAAAGACTAGTCGCCTTTGCTT 371232 Query 61508 TGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTG 61567 |||| ||||| || ||| || || || ||| | || || ||||||||||| | | Sbjct 371233 CTATCGAAGGTGTCTTCTTCTCCGGTTCCTTCGCCTCCATTTTCTGGTTGAAGAAGAGAG 371292 Query 61568 GACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCA 61625 | | ||||| ||| |||||||| || || ||||| | | ||||| || |||| Sbjct 371293 GTATGATGCCAGGTTTGACCTTCTCTAACGAATTGATTTGCAGAGACGAAGGTTTGCA 371350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567917628880