Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079145.1_202017-03- 21] 17 sequences; 12,214,669 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq15 183 2e-41 seq5 150 1e-31 seq10 100 2e-16 >seq15 Length=1201643 Score = 183 bits (202), Expect = 2e-41 Identities = 981/1557 (63%), Gaps = 49/1557 (3%) Strand=Plus/Plus Query 65421 GATTGATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGG 65480 |||| | ||||||||| || || |||| |||||||| || ||||| || || | | Sbjct 234869 GATTAACGACTTGGAATTCACCAGACAAGACACGACGAGAGTACATGTTTGAAGTCACTG 234928 Query 65481 GTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGA 65540 ||||||| |||| | | || |||||||| | ||| || ||||||||||| || || | Sbjct 234929 GTTCAAAACATTCGTTATACCCAAGAATTTGAGAAGTCGAGGCAGTTGGCATTGGCGCCA 234988 Query 65541 CCAACAATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCC 65600 || ||||||| ||||| | | | |||| | | || ||||| | || Sbjct 234989 TTGTTAAAGAGTTTCTTAATCCATGTTTGACTATGTCCTTTCTTAAGATTTCCCAATCCC 235048 Query 65601 ACATC------GGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGA 65654 |||| || ||| ||| |||||| || ||| || | || Sbjct 235049 ACATACCAAATGGCTTAGCGTT------------CCACATGTCAAATTGTAGAATACCCT 235096 Query 65655 TACTGGCCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGC 65714 || ||| || ||||| |||| | ||| || |||| || || | || |||| Sbjct 235097 TAGAGGCTGGAGAACCTTCGAAAGTGGAATACTTACCTTCCTTCTGTGCCAATTCACAGG 235156 Query 65715 TGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATT--AAGTTCACGTGC 65772 || || || | ||| ||| ||||| |||||||| || || ||||| | || Sbjct 235157 AGGCTTCAAGAGTAGCATGATAGATGGTTTCGAAAATCTGTTTGTTCAAAGTTT--GAGC 235214 Query 65773 CTCATCGCTCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCC 65832 || || || | || | || || || | | | || ||||||||||||||||| || Sbjct 235215 TTCTTCCGATTCAAAGGGTAGACGCAACATCATATAGGTATCGGCCAGACCTTGAACACC 235274 Query 65833 AATACCGATGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATT 65892 | | || || | ||| || ||| ||| ||| || ||||| || || || ||||| Sbjct 235275 CAAGGCAATAGGTCTATGCTTCATATTTGAATTTCTGGCTTCAGGAACTGGATAATAATT 235334 Query 65893 GATATCGATAATGCGATTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTC 65952 |||||| | | ||||| || | || | || | | || | || || Sbjct 235335 ACGATCGATGACTCTGTTCAAGTTATGGGTAATTACTTTAGCAATTTCATGTAAACTCTC 235394 Query 65953 GAAATCAAAATGTTTAGG---ACGATCGGGAGTGCCGGACACC---ACAAACTTGGGAAG 66006 ||||| | || | || || ||| || ||| | ||||| || || Sbjct 235395 GAAATTATAACTTGCAGTTTTACCATCTTCAG------ACATCTCGACAAATGCTGGGAG 235448 Query 66007 GGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTC 66066 ||||| ||| || || || || || || | || || || | || ||||||||| ||||| Sbjct 235449 GGCAATAGAGGCTAGATTACAAACGGCGGTTTCATCTGGGGAGGAATACTCGACGATTTC 235508 Query 66067 GGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCA 66126 |||| ||| | ||||| ||||| |||||||| || |||| | ||| || Sbjct 235509 ACAACACAAATTGGATGATTTAATGGTACCCAAGTTCTGTTGGTTTGTCTTTCTATTACA 235568 Query 66127 TGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTG 66186 || |||||||| | |||| | || || || || || ||| | | | || || | Sbjct 235569 TGAGTCCTTGTAAACCATGAAAGGTGTACCTGTTTCTGTTTGTGCTTGTAAAATTGCATA 235628 Query 66187 CCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTA 66246 ||| | | ||||| | || |||| | ||||| | ||||||| | || Sbjct 235629 CCATAACTTTTGGGCCTTAATGGTTT-TACCACG--ACCTTCCCTTTCGTAACGGGTATA 235685 Query 66247 GAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGA-CACTTGTGTGGACACA 66305 || | ||| || |||||||| || || | || ||| || || ||| | | Sbjct 235686 TAGCTCTTCAAATTCATCACCCCAGACATCATCTAAACCTGGGGCAGCACTG-GGAGAAA 235744 Query 66306 TCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGG 66365 | | ||| ||||||| || ||||| |||||| || ||||| ||||| || | Sbjct 235745 ATAAAGTCCAGGGCCCATCCTCTTGAACACGTTTCATAAAAAGGTCAGGAATCCACAGAG 235804 Query 66366 CGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGA 66425 | ||| | ||| | ||| || || || | || || |||| | | |||| | Sbjct 235805 CAGGGAACAAATCCCTTGCACGGATTTCTTCTTTACCATGGGTTTTTCTAATATCGACAA 235864 Query 66426 ACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGC 66485 | || ||||| || |||||||||||||||| | | | ||| || | ||| | ||| Sbjct 235865 AGTCGAAGATATCTGCATGCCATGGTTCCAAGAAAAGGGCAAAGGCGCCAGGTCTCTTGT 235924 Query 66486 CGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCC 66545 || |||||||| || || ||||| ||||||||| ||||| | ||| || | | || Sbjct 235925 TACCTCCTTGGTCCACATAACGAGCAGTATTGTTGAAAACACGGATCATAGGAATCAACC 235984 Query 66546 CGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACAT 66605 | || || | || ||||| ||| |||| || ||| | || || | || || || Sbjct 235985 CATTTGAAGTACCGTTGGTACCGGCGATATAAGAACCTGTGGAACGGATGTTGTTAATAT 236044 Query 66606 TCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATA 66665 ||||||| |||||| || ||||| || || |||||| || || || | | Sbjct 236045 GAAGACCAACACCACCTGCAGTCTTGGAAATCATAGCACATTCTTTCAAAGTATCATAAA 236104 Query 66666 TGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGG 66725 | || ||||| |||||| |||| |||| | ||| | |||||| | |||||| | | Sbjct 236105 TACCTTCAATAGAGTCATCCTTCATGGCAATTAGGAAACATGAAGACATTTGGGGATGTG 236164 Query 66726 GTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAAT 66785 | || | || ||| | ||| || | |||||| || || || ||||| ||| Sbjct 236165 GAGTACCAGCGTTGAATAAGGTTGGGGAAGCGTGAGTGAAATATCTTAACGACATCAAAT 236224 Query 66786 TGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATC 66844 |||| |||| | |||| ||||| | || || || || || | |||| ||||| Sbjct 236225 TGTAGGTCTTCAGCACAGACTCAATATCACTACCGTGGATACCCAGCGCCACA-CGCATA 236283 Query 66845 AGGAGGTATTGAGGCCGTTCGACCA----GCCGATCCTTGATATGCATTAAGTAGGAGCG 66900 | | || || |||||||| ||| ||| || | || || || || || || Sbjct 236284 ACCAAGTGCTGTGGCCGTTCAGCCACTTCACCGTTCAGTCTTA-GC---AAATACGAACG 236339 Query 66901 TTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATCGTTAGCATGCACGATGGC 66957 |||| ||||||| ||||| |||| || |||||||| || | | ||||||||| Sbjct 236340 CTCCAAAGTCTTGAACCCAAAATACGTATACTTGAAATCTCTATCGTACACGATGGC 236396 >seq5 Length=577572 Score = 150 bits (166), Expect = 1e-31 Identities = 958/1525 (63%), Gaps = 37/1525 (2%) Strand=Plus/Minus Query 65429 ACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAG 65488 |||||||| || ||||| | ||||||||| || |||||||| || | |||||||| Sbjct 306681 ACTTGGAATTCACCGGATAAGACACGACGGGAGTACATGTTGGAGGTAACTGGTTCAAAA 306622 Query 65489 GATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAAT 65548 ||||| | | || | ||||||| || ||||| || ||||| || || | ||| Sbjct 306621 CATTCATTATAACCCAATATTTGGGATGTGGATGCGGTAGGCATTGGTGCCATGGTCAAA 306562 Query 65549 GAGTTTCGCAATCCGTTCATTTCA--ATGTTGTGACGCAATTCGTCCCAGTTCCACATC- 65605 ||||||| | || | ||||| || | | | ||| |||||| | |||||| Sbjct 306561 GAGTTTCTAATACCATG--TTTCATGATATCTTTCCTCAAAGTGTCCCAATCCCACATGC 306504 Query 65606 ----GGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGC 65661 || || | | |||| |||||||| || || | || | || Sbjct 306503 CGTAGGGTTTTTG-----ATCC------CACATATCGAACTGAAGTATACCTTGAGAAGC 306455 Query 65662 CGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTC 65721 || ||||| |||| | ||||| || |||| | || |||| ||| | || Sbjct 306454 TGGAGAACCTTGGAAGGTTTCGTATGGGCCGTCCTTTTGAGCTAGTTCACAAGAAGCTTC 306395 Query 65722 GAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCT 65781 | | |||| |||||| || || || || | ||| ||| ||| ||||| || Sbjct 306394 CATGGAGGCATGATAAATTGTTTCAAATATTTGGATATTTAGTAAACGGGCCTCTTCAGA 306335 Query 65782 CTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGAT 65841 || | || | || | || | ||||||||| || | ||||||||| || | | || Sbjct 306334 ATCAAAGGGTAAACGTAGCAACATAAAAGTGTCAGCTAAACCTTGAACACCCAAGGCAAT 306275 Query 65842 GGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGAT 65901 || | ||| | || |||||| | |||||| || |||||||||||||| ||| || Sbjct 306274 TGGTCTATGTCTCATATTGGATCTTCTCGCTTCTTCAACAGGGTAGTAATTACGATCAAT 306215 Query 65902 AATGCGATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATCAA 65960 || | || ||||| || || || || | | || ||| | |||| || ||| | Sbjct 306214 AACTCTGTTTAAATTACGAGTAACAACTTTGGCAATTTCGT-GTAATTTTTTGAAGTTGT 306156 Query 65961 AATGTTTAGGACGATCGGGAGTGC-CGGACACCACAA---ACTTGGGAAGGGCAAGAGAT 66016 || ||| | | | || || | | ||| ||| || || | ||||| || Sbjct 306155 AAG---TAGAA-GTTTGGCCGTCCTCTGACGTTTCAATGAACGCTGGCAAGGCAACGGAA 306100 Query 66017 GCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACA-G 66075 || | ||| || ||||| | ||||| ||||| | ||||| |||||||| ||| | | Sbjct 306099 GCCAAGTTACAAACAGCAGTTTCGTCCGGAGCTGAGTACTCAACAATTTCACAGCATAAG 306040 Query 66076 ATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTT 66135 || || | || ||||| || | ||| ||| ||| | ||||| ||||| || Sbjct 306039 TTTGATGACTTG-ATAACACCCAAGTTTTTTTGGTTAGACTTTCTGTTGCAAGCATCTTT 305981 Query 66136 GTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGC 66195 || | || | || || || || ||| ||| | || | |||| | ||| | Sbjct 305980 ATAAACCACAAAAGGTGTACCCGTTTCAGTTTGTGCTTCCAAAATGGAATACCATAATTT 305921 Query 66196 GCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTC 66255 | || || | || | |||| | ||||| |||||| | || || ||| Sbjct 305920 TTGAGCTTTAATGGT-CTTACCACG--ACCTTCTTTTTCGTAGCGGGTATATAGAGCTTC 305864 Query 66256 GAAGGATTCACCCCATACTTCGGACAGACATGGA-CACTTGTGTGGACACATCAGCGACC 66314 || ||||| | ||| |||| ||| | ||| |||| | | || | || Sbjct 305863 AAACTCGTCACCGTAACAGTCGCTTAGACCGGGAGCGGCTGT-TGGAGAGAACAAAGTCC 305805 Query 66315 AATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGA 66374 || |||| || ||| ||||| ||| || |||||||| ||||| || || || | Sbjct 305804 AAGTCCCATTCTCTTCGACACGCTTCATGAAAAGATCAGGAATCCACAGAGCAGGAAACA 305745 Query 66375 GATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGA 66434 ||| | ||| || || || | ||||| || || | | || | || ||||||| Sbjct 305744 AATCTCTTGCACGAATTTCTTCTTTACCGTGGTTCTTTCTGATATCAATAAAATCAAAGA 305685 Query 66435 TGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTT 66494 | || |||||||||||||||||||| | || || | || | |||| ||||| | Sbjct 305684 TATCAGCATGCCATGGTTCCAGGTACAGAGCAAAGGCACCAGGTCTTTTGTTACCACCCT 305625 Query 66495 GGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATT 66554 ||||||| || || ||| ||| || || ||||| | ||| || | | ||||||||| Sbjct 305624 GGTCGACATAACGGGCGGTATTATTAAAAACACGAATCATGGGAATTAACCCGTTAGAAG 305565 Query 66555 TGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAA 66614 | || || || || | ||| || || || || || | || | || ||||||| Sbjct 305564 TACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGGATATGTAGACCAA 305505 Query 66615 TACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAA 66674 ||||||| || || || || || |||||| || || || | | || || || | Sbjct 305504 TACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTGTCGTAAATACCCTCGA 305445 Query 66675 TGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGG 66734 | ||||| |||| |||| | | | | || || | ||| ||||| || || | | Sbjct 305444 TAGAGTCCTCCTTCATGGCGACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCAG 305385 Query 66735 CCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCT 66794 | || | || || | || || |||||||| | ||||||| | || || || | Sbjct 305384 CATTAAACAAAGTTGGAGAGGCATGAGTAAAGTATTTTAGAGACATTAAGTTATATGTTT 305325 Query 66795 CGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATT 66854 | | |||| || |||| | || || || || ||||| || ||| | | || || Sbjct 305324 CTAGAGCAGCTTCGATGTCTCTACCGTGGATGCCCAGTGCGACTCTCATAATTAAGTGTT 305265 Query 66855 GAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGA 66914 | || |||||| ||| | | ||||| | ||| || || ||||||| || |||| Sbjct 305264 GTGGACGTTCGGCCACTTGGCCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTGA 305205 Query 66915 TACCAAAGTACGAGTAATTGAAATC 66939 |||||| || ||| | |||||| Sbjct 305204 AACCAAAATAACTGTACTGGAAATC 305180 >seq10 Length=751133 Score = 100 bits (110), Expect = 2e-16 Identities = 275/418 (66%), Gaps = 10/418 (2%) Strand=Plus/Plus Query 61213 GCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAG 61272 || || || |||||||| |||||||| || ||||| || || | ||| ||| | Sbjct 380071 GCCTTTTTCGCCGCTTCTGACGGTATTGTTAATGAAAACTTGGTTGAAAACTTCTCCACC 380130 Query 61273 GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTC 61332 || || ||| | | ||||| ||||||| || ||||| || || || ||| | Sbjct 380131 GAAGTTCAAATTCCAGAGGCAAAGAGTTTCTATGGTTTCCAAATCATGATTGAAAATATT 380190 Query 61333 CACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAA 61392 || || || | ||| | | |||||||| ||||||| ||| | |||| ||||| Sbjct 380191 CATTCTGAAACTTACTCCTTATTGATCGATACCTACATCAAGGACCCTAAGGAAAGTGAA 380250 Query 61393 CGATTGTTCAATGCCATCGAGACGATACCGG----CGGTGAAGCGGAAAGCGGATTGGGC 61448 |||||||||||||| | || || || | |||||| ||| || || ||||| Sbjct 380251 TTCTTGTTCAATGCCATTCACACTATCCCAGAAATCGGTGA----GAAGGCCGAGTGGGC 380306 Query 61449 CTTCAATTGGA-TCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGG 61507 | | |||| ||| | ||| || ||||||||| || | | || ||||| Sbjct 380307 TCTAAGATGGATTCAAGACGCTGACGCCT-TGTTTGGTGAAAGACTAGTCGCCTTTGCTT 380365 Query 61508 TGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTG 61567 |||| ||||| || ||| || || || ||| | || || ||||||||||| | | Sbjct 380366 CTATCGAAGGTGTCTTCTTCTCCGGTTCCTTCGCCTCCATTTTCTGGTTGAAGAAGAGAG 380425 Query 61568 GACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCA 61625 | | ||||| ||| |||||||| || || ||||| | | ||||| || |||| Sbjct 380426 GTATGATGCCAGGTTTGACCTTCTCTAACGAATTGATTTGCAGAGACGAAGGTTTGCA 380483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567917628880