Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03- 21] 17 sequences; 11,929,789 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq9 156 3e-33 seq5 150 1e-31 seq10 100 2e-16 >seq9 Length=439147 Score = 156 bits (172), Expect = 3e-33 Identities = 975/1552 (63%), Gaps = 39/1552 (3%) Strand=Plus/Plus Query 65421 GATTGATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGG 65480 |||| | ||||||||| || || |||| |||||||| || ||||| || || | | Sbjct 234434 GATTAACGACTTGGAATTCACCAGACAAGACACGACGAGAGTACATGTTTGAAGTCACTG 234493 Query 65481 GTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGA 65540 ||||||| |||| | | || |||||||| | ||| || ||||||||||| || || | Sbjct 234494 GTTCAAAACATTCGTTATACCCAAGAATTTGAGAAGTCGAGGCAGTTGGCATTGGCGCCA 234553 Query 65541 CCAACAATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCC 65600 ||| ||||||| ||||| | | |||||| | | || ||||| | || Sbjct 234554 TTGTCAAAGAGTTTCTTAATCCATGTTTGACAATGTCCTTTCTTAAGGTCTCCCAATCCC 234613 Query 65601 ACAT-CGGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTG 65659 |||| | | | | | ||| | ||||| || ||| || | || || | Sbjct 234614 ACATACCAAATGGCTTAG-CATTC------CACATGTCAAATTGTAGAATACCCTTAGAG 234666 Query 65660 GCCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTC 65719 || || ||||| |||| | ||| || |||| | || | || |||| || Sbjct 234667 GCTGGAGAACCTTCGAAAGTGGAATACTTACCTTCCTTTTGTGCCAATTCACAGGAGGCT 234726 Query 65720 TCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATT--AAGTTCACGTGCCTCAT 65777 || || | ||| ||| ||||| |||||||| || || ||||| | || || | Sbjct 234727 TCAAGAGTAGCATGATAGATGGTTTCGAAAATCTGTTTGTTCAAAGTTT--GAGCTTCTT 234784 Query 65778 CGCTCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATAC 65837 || | || | || || || | | | || ||||||||||||||||| || | Sbjct 234785 TAGATTCAAAGGGTAGACGCAACATCATATAGGTATCGGCCAGACCTTGAACACCCAAGG 234844 Query 65838 CGATGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATAT 65897 | || || | ||| || ||| ||| ||| || ||||| || || || ||||| || Sbjct 234845 CAATAGGTCTATGCTTCATATTTGAATTTCTGGCTTCAGGAACTGGATAATAATTACGAT 234904 Query 65898 CGATAATGCGATTCAAATTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAAT 65957 |||| | | ||||| || | || | || | | || | || ||||||| Sbjct 234905 CGATGACTCTGTTCAAGTTATGGGTAATGACTTTGGCAATTTCATGTAAACTCTCGAAAT 234964 Query 65958 CAAAATGTTTAGG---ACGATCGGGAGTGCCGGACACC---ACAAACTTGGGAAGGGCAA 66011 | || | || || ||| || ||| | ||||| || || |||| Sbjct 234965 TATAACTTGCAGTTTTACCATCTTCAG------ACATCTCGACAAATGCTGGGAGAGCAA 235018 Query 66012 GAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGC 66071 ||| || || || || || || | || || || | | ||||||||| ||||| | Sbjct 235019 TAGAGGCTAGATTACAAACGGCAGTTTCATCTGGGGAAGAATACTCGACGATTTCACAAC 235078 Query 66072 ACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCAT 66131 ||| ||| | ||||| ||||| |||||||| || |||| | ||| |||| | Sbjct 235079 ACAAATTGGATGATTTAATGGTACCCAAGTTCTGTTGGTTTGTCTTTCTATTACATGAGT 235138 Query 66132 CCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAA 66191 ||||||| | |||| | || || || || || ||| | | | ||| || | ||| | Sbjct 235139 CCTTGTAAACCATGAAAGGTGTACCTGTTTCTGTTTGTGCTTGTAAGATTGCATACCATA 235198 Query 66192 GAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGT 66251 | || || | || |||| | ||||| | ||||||| | || || | Sbjct 235199 ACTTTTGGGCTTTAATGGTTT-TACCACG--ACCTTCCCTTTCGTAACGGGTATATAGCT 235255 Query 66252 GTTCGAAGGATTCACCCCATACTTCGGACAGACATGGA-CACTTGTGTGGACACATCAGC 66310 ||| || |||||||| || || | || ||| || || ||| | | | Sbjct 235256 CTTCAAATTCATCACCCCAGACATCATCTAAACCTGGGGCAGCACTG-GGAGAAAATAAA 235314 Query 66311 GACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAG 66370 | ||| ||||||| || ||||| |||||| || ||||| ||||| || || | Sbjct 235315 GTCCAGGGCCCATCCTCTTGAACACGTTTCATAAAAAGGTCAGGAATCCACAGAGCAGGG 235374 Query 66371 AAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCA 66430 || | ||| | ||| || || || | || || |||| | | |||| || || Sbjct 235375 AACAAATCCCTTGCACGGATTTCTTCTTTACCATGGGTTTTTCTAATATCGACAAAGTCG 235434 Query 66431 AAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCA 66490 ||||| || |||||||||||||||| | | | || || | || | ||| || Sbjct 235435 AAGATATCTGCATGCCATGGTTCCAAGAAAAGCGCAAAGGCACCAGGTCTCTTGTTACCT 235494 Query 66491 CCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTA 66550 |||||||| || || ||||| ||||||||| ||||| | ||| || | | ||| || Sbjct 235495 CCTTGGTCCACATAACGAGCAGTATTGTTGAAAACACGAATCATAGGAATCAACCCATTC 235554 Query 66551 GATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGA 66610 || | || || || ||| |||| || ||| | || || | || || || ||| Sbjct 235555 GAAGTACCGTTAGTACCGGCGATATAAGAACCTGTGGAACGGATGTTGTTAATATGAAGA 235614 Query 66611 CCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCG 66670 |||| |||||| || ||||| || || |||||| || || || | ||||| Sbjct 235615 CCAACACCACCTGCAGTCTTAGAAATCATAGCACATTCTTTCAAAGTATCATAAATGCCT 235674 Query 66671 TCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTG 66730 ||||| |||||| |||| |||| | ||| | |||||| | |||||| | || || Sbjct 235675 TCAATAGAGTCATCCTTCATGGCAATTAGGAAACATGAAGACATTTGGGGATGTGGAGTA 235734 Query 66731 GCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTAC 66790 | || ||| | ||| || | |||||| || || || ||||| ||||||| Sbjct 235735 CCAGCGTTGAATAAGGTTGGGGAAGCGTGAGTGAAATATCTTAACGACATCAAATTGTAG 235794 Query 66791 GTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGCATCAGGAG 66849 |||| | |||| || || | || || || || || | |||| ||||| | | Sbjct 235795 GTCTTCAGCACAGACTCGATATCACTACCGTGGATACCCAGCGCCACA-CGCATAACCAA 235853 Query 66850 GTATTGAGGCCGTTCGACCA----GCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCA 66905 || || |||||||| ||| ||| || | || || || || || || |||| Sbjct 235854 GTGCTGTGGCCGTTCTGCCACTTCACCGTTCAATCTTA-GC---AAATACGAACGCTCCA 235909 Query 66906 GGGTCTTGATACCAAAGTACGAGTAATTGAAATCGTTAGCATGCACGATGGC 66957 ||||||| ||||| |||| || |||||||| || | | |||||| || Sbjct 235910 AAGTCTTGAACCCAAAATACGTATACTTGAAATCTCTATCGTACACGATCGC 235961 >seq5 Length=1007496 Score = 150 bits (166), Expect = 1e-31 Identities = 955/1525 (63%), Gaps = 37/1525 (2%) Strand=Plus/Minus Query 65429 ACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAG 65488 |||||||| || ||||| | ||||||||| || ||||| || |||| |||||||| Sbjct 297638 ACTTGGAATTCACCGGATAAGACACGACGGGAGTACATGTTAGAGGTGACTGGTTCAAAA 297579 Query 65489 GATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAAT 65548 ||||| | | || | ||||||| || |||||||| ||||| || || | ||| Sbjct 297578 CATTCATTATAACCCAATATTTGGGATGTGGATGCAGTAGGCATTGGTGCCATGGTCAAA 297519 Query 65549 GAGTTTCGCAATCCGTTCATTTCA--ATGTTGTGACGCAATTCGTCCCAGTTCCACATC- 65605 ||||||| | || | ||||| | | | | ||| |||||| | |||||| Sbjct 297518 GAGTTTCTAATACCATG--TTTCATGACATCTTTCCTCAAAGTGTCCCAATCCCACATGC 297461 Query 65606 -----GGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGG 65660 ||||| | ||| ||||||||| || || | || | | Sbjct 297460 CGTAGGGTTTTTGGTC------------CCACATATCGAACTGAAGTATACCTTGAGAAG 297413 Query 65661 CCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCT 65720 | || ||||| |||| | ||||| || |||| | || | || ||| | | Sbjct 297412 CTGGAGAACCTTGGAAGGTTTCGTATGGGCCGTCCTTTTGAGCTAATTCACAAGAAGCTT 297353 Query 65721 CGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGC 65780 | | | |||| |||||| || || || || | ||| ||| ||| ||||| || Sbjct 297352 CCATGGAGGCATGATAAATTGTTTCAAAGATTTGGATATTTAGTAAACGGGCCTCTTCAG 297293 Query 65781 TCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGA 65840 || | || | || | || | ||||||||| |||| ||||||||| || | | | Sbjct 297292 AATCAAAGGGTAAACGTAGCAACATAAAAGTGTCAGCCAAACCTTGAACACCCAAGGCAA 297233 Query 65841 TGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGA 65900 | || | ||| | || |||||| | |||||| || | ||||||||||| ||| | Sbjct 297232 TTGGCCTATGTCTCATATTGGATCTTCTCGCTTCTTCAATGGGGTAGTAATTACGATCAA 297173 Query 65901 TAATGCGATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATCA 65959 ||| | || ||||| || || || || | | || ||| | |||| || ||| | Sbjct 297172 TAACTCTGTTTAAATTACGAGTAACAACTTTGGCAATTTCGT-GTAATTTTTTGAAGTTG 297114 Query 65960 AAATGTTTAGGACGATCGGGAGTGC-CGGACACCACAA---ACTTGGGAAGGGCAAGAGA 66015 || ||| | | | || || | | ||| ||| || || | ||||| || Sbjct 297113 TAAG---TAGAA-GTTTGGCCGTCCTCTGACGTTTCAATGAACGCTGGCAAGGCAACGGA 297058 Query 66016 TGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAG 66075 || | ||| || ||||| | ||||| ||||| | ||||| |||||||| ||| | Sbjct 297057 AGCCAAGTTACAAACAGCAGTTTCGTCCGGAGCTGAGTACTCAACAATTTCACAGCATAA 296998 Query 66076 ATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTT 66135 || | || ||||| || | ||| ||| ||| | ||||| |||||||| Sbjct 296997 GTTCGATGACTTGATAACACCCAAGTTTTTTTGGTTAGACTTTCTGTTGCAAGCATCCTT 296938 Query 66136 GTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGC 66195 || | || | || || || || ||| ||| | || | |||| | ||| | Sbjct 296937 ATAAACCACAAAAGGTGTACCAGTTTCAGTTTGTGCTTCCAAAATGGAATACCATAATTT 296878 Query 66196 GCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTC 66255 | || || | || | |||| | ||||| |||||| | || || ||| Sbjct 296877 TTGAGCTTTAATGGT-CTTACCACG--ACCTTCTTTTTCGTAGCGGGTATATAGAGCTTC 296821 Query 66256 GAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGT-GGACACATCAGCGACC 66314 || ||||| | ||| |||| ||| || ||| ||| | | || | || Sbjct 296820 AAAATCGTCACCGTAACAGTCGCTTAGACCGGGAG-CTGCTGTTGGAGAGAACAAAGTCC 296762 Query 66315 AATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGA 66374 || |||| | ||| ||||| ||| || |||||||| ||||| || || || | Sbjct 296761 AAGTCCCATTTTCTTCGACACGTTTCATGAAAAGATCAGGAATCCACAGAGCAGGAAACA 296702 Query 66375 GATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGA 66434 ||| | ||| || || || | ||||| || || | | || | || ||||||| Sbjct 296701 AATCTCTTGCACGAATTTCTTCTTTACCGTGGTTCTTTCTGATATCAATAAAATCAAAGA 296642 Query 66435 TGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTT 66494 | || |||||||||||||||||||| | || || | || | |||| ||||| | Sbjct 296641 TATCAGCATGCCATGGTTCCAGGTACAGAGCAAAGGCACCAGGTCTTTTGTTACCACCCT 296582 Query 66495 GGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATT 66554 ||||||| || || ||| ||| || || ||||| | ||| || | | ||||||||| Sbjct 296581 GGTCGACATAACGGGCGGTATTATTAAAAACACGAATCATGGGAATTAACCCGTTAGAAG 296522 Query 66555 TGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAA 66614 | ||||| || || | ||| || || || || || | |||| || ||||||| Sbjct 296521 TACCATTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGAATATGTAGACCAA 296462 Query 66615 TACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAA 66674 ||||||| || || || || || |||||| || || || | | || || || | Sbjct 296461 TACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTGTCGTAAATACCCTCGA 296402 Query 66675 TGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGG 66734 | ||||| |||| |||| | | | | || || | ||| ||||| || || | | Sbjct 296401 TAGAGTCCTCCTTCATGGCGACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCAG 296342 Query 66735 CCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCT 66794 | || | || || | || || |||||||| | ||||||| | || || || | Sbjct 296341 CATTAAACAAAGTTGGAGAGGCATGAGTAAAGTATTTTAGAGACATTAAGTTATATGTTT 296282 Query 66795 CGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATT 66854 | | |||| || |||| | || || || || ||||| || ||| | | || || Sbjct 296281 CTAGAGCAGCTTCGATGTCTCTACCGTGGATGCCCAGTGCGACTCTCATAATTAAGTGTT 296222 Query 66855 GAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGA 66914 | || |||||| ||| || | ||||| | ||| || || ||||||| || || | Sbjct 296221 GTGGACGTTCGGCCACTTGACCGTTGATTCTTAGTAAATAAGAACGTTCCAAAGTTTTAA 296162 Query 66915 TACCAAAGTACGAGTAATTGAAATC 66939 |||||| || ||| | |||||| Sbjct 296161 AACCAAAATAACTGTACTGGAAATC 296137 >seq10 Length=750185 Score = 100 bits (110), Expect = 2e-16 Identities = 275/418 (66%), Gaps = 10/418 (2%) Strand=Plus/Plus Query 61213 GCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAG 61272 || || || |||||||| |||||||| || ||||| || || | ||| ||| | Sbjct 397697 GCCTTTTTCGCCGCTTCTGACGGTATTGTTAATGAAAACTTGGTTGAAAACTTCTCTACC 397756 Query 61273 GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTC 61332 || || ||| | | ||||| ||||||| || |||||||| || || ||| | Sbjct 397757 GAAGTTCAAATTCCAGAGGCAAAGAGTTTCTATGGTTTCCAGATCATGATTGAAAATATT 397816 Query 61333 CACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAA 61392 || || || | ||| | | |||||||| ||||| | ||| | |||| ||||| Sbjct 397817 CATTCTGAAACTTACTCCTTATTGATCGATACCTACATAAAGGACCCTAAGGAAAGTGAA 397876 Query 61393 CGATTGTTCAATGCCATCGAGACGATACCGG----CGGTGAAGCGGAAAGCGGATTGGGC 61448 |||||||||||||| | || || || | |||||| ||| || || ||||| Sbjct 397877 TTCTTGTTCAATGCCATTCACACCATCCCAGAAATCGGTGA----GAAGGCCGAGTGGGC 397932 Query 61449 CTTCAATTGGA-TCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGG 61507 | | |||| ||| | ||| || ||||||||| || | | || ||||| Sbjct 397933 TCTAAGATGGATTCAAGACGCTGACGCCT-TGTTTGGTGAAAGACTAGTCGCCTTTGCCT 397991 Query 61508 TGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTG 61567 |||| ||||| || ||| || || || || | || || ||||||||||| | | Sbjct 397992 CTATCGAAGGTGTCTTCTTCTCCGGTTCCTTCGCTTCCATTTTCTGGTTGAAGAAGAGAG 398051 Query 61568 GACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCA 61625 | | ||||||||| |||||||| || || ||||| | | ||||| || |||| Sbjct 398052 GTATGATGCCCGGTTTGACCTTCTCTAACGAATTGATTTGCAGAGACGAAGGTTTGCA 398109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567917628880