Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F000805465.1_202014- 12-19] 878 sequences; 21,919,346 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq800 221 2e-55 >seq800 Length=770 Score = 221 bits (244), Expect = 2e-55 Identities = 230/293 (78%), Gaps = 18/293 (6%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | ||| || |||||||||||||||||||||||| |||||| | Sbjct 356 GTACGAGAGGAACAGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 299 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct 298 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 239 Query 121 GAACGGGGTGA-TTCTCTCCT--GCACATCGTAGTCGGATACGAAT-AGGCTT------- 169 ||||| ||||| |||| | || |||| ||| |||||||||| |||| | Sbjct 238 GAACGCGGTGATTTCTTTGCTCCACACAATATAGATGGATACGAATAAGGCGTCCTTGTG 179 Query 170 -CGGCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTC 225 || | | ||||| |||||||| ||||||| || |||||| || ||| ||| Sbjct 178 GCGTCGCTGAACCATAGCAGGCTAGCAACGGTGCACTTGGCGGAAAGGCCTTGGGTGCT- 120 Query 226 AGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||||| |||||||| ||| |||| |||||||||| |||| | ||||| Sbjct 119 TGCTGGCGAATTGCAATGTCATTTTGCGTGGGGATAAATCATTTGTATACGAC 67 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819193032192