Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F000805465.1_202014- 12-19] 878 sequences; 21,919,346 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq3 100 1e-15 seq46 87.8 7e-12 >seq3 Length=183324 Score = 100 bits (110), Expect = 1e-15 Identities = 109/145 (75%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 364425 CAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGT 364484 ||| |||||||||||| ||||| | ||||||| || || | || || || || || | Sbjct 153270 CAACAGTCATACGAGATGGAATAGCATGAGGGTTAATAATCAAATCTGGAACAATACCTT 153211 Query 364485 CAGCGGTAAAGGGCATATCTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCAT 364544 | |||||||| ||||||||||| | || ||| |||||| || |||||||| | | Sbjct 153210 CTGCGGTAAATGGCATATCTTCTCTACGATATGTGATACCAATAGTACCCTTTTGACCGT 153151 Query 364545 AGCGAGAAGCAAACTTGTCGCCAAT 364569 ||||||||||| ||||| ||||| Sbjct 153150 GACGAGAAGCAAATTTGTCACCAAT 153126 >seq46 Length=84875 Score = 87.8 bits (96), Expect = 7e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 364429 AGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGTCAGC 364488 |||||||||||| ||||| | |||| ||||| || | || || || || || || || Sbjct 65405 AGTCATACGAGATGGAATAGCATGAGGATTGATAATTAAATCTGGAACGATACCTTCTGC 65346 Query 364489 GGTAAAGGGCATATCTTCGGGAGGAACGATGAGACCAATGGTTCCCTTTTGCGCATAGCG 364548 ||||| ||||||||||| | || ||| |||||| || |||||||| ||| || Sbjct 65345 TGTAAATGGCATATCTTCTCTACGATATGTGATACCAATAGTACCCTTTTGACCATGACG 65286 Query 364549 AGAAGCAAACTTGTCGCCAAT 364569 |||||| || ||||| || || Sbjct 65285 AGAAGCGAATTTGTCACCGAT 65265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884865196206054