Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq7267 167 1e-39
seq2372 161 6e-38
seq926 161 6e-38
seq1957 147 1e-33
seq7184 122 5e-26
seq2520 113 3e-23
seq5488 111 9e-23
seq8294 104 1e-20
>seq7267
Length=1316
Score = 167 bits (184), Expect = 1e-39
Identities = 108/117 (92%), Gaps = 1/117 (1%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|| ||||| ||||||||||||||||||||||||| || ||||||| ||||||||| ||
Sbjct 1102 GAGCCCAAGCACTTTGATTTCTCGTAAGGTGCCGAACGCGTCAAAAA-ATAACATCGTCC 1044
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1043 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 987
>seq2372
Length=2111
Score = 161 bits (178), Expect = 6e-38
Identities = 106/117 (91%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|||||||||||||||||||||||||||||||||||| | |||| | | |||| | |||
Sbjct 1329 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGTGGGTCATTAAAAAAACACCACCC 1388
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct 1389 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCATCTTCGA 1445
>seq926
Length=4954
Score = 161 bits (178), Expect = 6e-38
Identities = 106/117 (91%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|||||||||||||||||||||||||||||||||||| | |||| | | |||| | |||
Sbjct 718 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGTGGGTCATTAAAAAAACACCACCC 777
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct 778 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCATCTTCGA 834
>seq1957
Length=568
Score = 147 bits (162), Expect = 1e-33
Identities = 103/117 (88%), Gaps = 3/117 (3%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| |||||||||||||||||||||||| ||| || ||||| | ||
Sbjct 562 GAACCCAAAAACTTTGATTTCTCGTAAGGTGCCG---GAGAGGTTATTATAACGCCCTCC 506
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 505 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 449
>seq7184
Length=1315
Score = 122 bits (134), Expect = 5e-26
Identities = 100/120 (83%), Gaps = 5/120 (4%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCA---AAATGATAACATCG 57
||||||||| |||||||||||||||| | ||||| |||| || |||||| |||||
Sbjct 647 GAACCCAAAAACTTTGATTTCTCGTACCGCGCCGATCGAGCCAGTGAAATGAG--CATCG 590
Query 58 CCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||| | |||||||||||||||| ||||||||||| ||||||||| ||||| |||||
Sbjct 589 ACCGATTCGGAGTCGGCATAGTTTACTGTTAAGACTACAACGGTATCTAATCGTTTTCGA 530
>seq2520
Length=662
Score = 113 bits (124), Expect = 3e-23
Identities = 96/117 (82%), Gaps = 6/117 (5%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||| ||||||||||||| ||||||| ||| || |||| ||| | |||
Sbjct 54 GAACCCAAAAACTTTGATTTCTCACAAGGTGCTGAGACTGTTAAAA-----ACAGC-CCC 107
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||| ||||||||||| |||| ||||||||||||||||| ||| |||||||
Sbjct 108 AATCCCTAGTTGGCATAGTTTATGGTTGAGACTACGACGGTATCTAATCATCTTCGA 164
>seq5488
Length=445
Score = 111 bits (122), Expect = 9e-23
Identities = 84/99 (85%), Gaps = 0/99 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||||||||||||||| |||||||||||||| | |||| | | |||| | |||
Sbjct 99 GAACCCAAAGACTTTGATTTCGCGTAAGGTGCCGAGTGGGTCATTAAAAAAACACCACCC 40
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACG 99
|| |||||| |||||||| || ||||||||||||||||
Sbjct 39 GAACCCTAGGCGGCATAGGGTAGGGTTAAGACTACGACG 1
>seq8294
Length=595
Score = 104 bits (114), Expect = 1e-20
Identities = 59/60 (98%), Gaps = 0/60 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 593 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAAAGATAACATCGCCC 534
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278376721410
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |