Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= AAMG01000538.1
Length=248
Score E
Sequences producing significant alignments: (Bits) Value
seq8708 78.8 1e-12
seq8043 77.0 5e-12
seq1759 73.4 5e-11
>seq8708
Length=2701
Score = 78.8 bits (86), Expect = 1e-12
Identities = 72/87 (83%), Gaps = 3/87 (3%)
Strand=Plus/Minus
Query 14 CACCGGGCAGGCGTCAGTCCGTATACATCGAC-TTACCGTCTTCGCACGGACCTGTGTTT 72
||||||||||| ||||| || |||||||| || || || || ||| || |||||||||
Sbjct 1702 CACCGGGCAGGTGTCAGACCTTATACATCAACATTTAGGTTTTTGCAAGGTCCTGTGTTT 1643
Query 73 TTAGTAAACAGTCGCTTCCCT-CTATT 98
| |||||||||||| |||||| |||||
Sbjct 1642 TAAGTAAACAGTCG-TTCCCTACTATT 1617
>seq8043
Length=1063
Score = 77.0 bits (84), Expect = 5e-12
Identities = 68/84 (81%), Gaps = 1/84 (1%)
Strand=Plus/Minus
Query 140 TGGCACCCCTTCTCCCGAAGTTACGG-GGCCATTTTGCCGAATTCCTTAACCACAGTTCA 198
|||||| |||| |||||||||||||| | | |||||||| |||||||| | |||||
Sbjct 461 TGGCACTCCTTGTCCCGAAGTTACGGTAGTTAGTTTGCCGAGTTCCTTAATGATTGTTCA 402
Query 199 CCCGAACGCCTTAGTATTCTCTAC 222
| | |||||||| |||| ||||||
Sbjct 401 CTCAAACGCCTTCGTATACTCTAC 378
>seq1759
Length=2292
Score = 73.4 bits (80), Expect = 5e-11
Identities = 72/92 (78%), Gaps = 1/92 (1%)
Strand=Plus/Plus
Query 157 AAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATT 216
|| ||||||| || |||||||| |||||| || | || | | | ||||||||||||
Sbjct 677 AACTTACGGGCACAATTTGCCGAGTTCCTTCACAAGCATTATCTCTA-CGCCTTAGTATT 735
Query 217 CTCTACCTGACCACCTGTGTCGGTTTACGGTA 248
|||||||| ||||||||||||||| ||||
Sbjct 736 CTCTACCTACGAACCTGTGTCGGTTTAGGGTA 767
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694340001887
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |