Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq2390 140 8e-31
seq6591 122 2e-25
seq8043 116 9e-24
seq8708 98.7 3e-18
seq1759 96.9 9e-18
>seq2390
Length=2302
Score = 140 bits (154), Expect = 8e-31
Identities = 199/277 (72%), Gaps = 11/277 (4%)
Strand=Plus/Minus
Query 11 CTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCG 70
||| |||| |||||| ||| ||||||||||||||| | |||||||| ||||
Sbjct 1384 CTGTATCTGCACAGCTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGTATCG 1325
Query 71 TTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 130
|||| |||||| |||| | | | | ||| | | ||||| ||||||||||||||||||| |
Sbjct 1324 TTACACCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGACCCT 1265
Query 131 TATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCA 190
| |||| ||||||| || ||||||| ||| |||| | | ||||| | | |
Sbjct 1264 CA-CGTTAAGGCCGCCTTTAACCGGGGGTTCTGTCAACATC-AAATGTTAGATCATTTAA 1207
Query 191 TCA-----ATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTG 245
| | ||||||| |||||||||||||| |||||| ||||| | | ||| |
Sbjct 1206 TTATCTTCATTAACCAGCCGGCACCGGGCAGATTTCACACTTTATACATAGATTTTTTTA 1147
Query 246 TTT----GCAGAGTGCTGTGTTTTTAATAAACAGTCG 278
| | ||| ||||||||||||| | ||||||||||
Sbjct 1146 TCTTTAAGCAAAGTGCTGTGTTTTAATTAAACAGTCG 1110
>seq6591
Length=2343
Score = 122 bits (134), Expect = 2e-25
Identities = 200/284 (70%), Gaps = 16/284 (6%)
Strand=Plus/Minus
Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66
|| |||| |||| ||||| ||| ||||||||| ||||| | ||||||||
Sbjct 946 TAAACTGTATCTGCACAGTTATTCCAATTTCACAGAGTCAATCATAGAGACAGCTGTTGT 887
Query 67 ATCGTTACGCCATTCGTGCAG-GTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGG 125
|||||||| |||||| |||| | | | | ||| | | ||||| ||| ||||||||||||
Sbjct 886 ATCGTTACACCATTCATGCAAAGACCGCATTTAACGGCCAAGGTATTCCGCTACCTTAGG 827
Query 126 ACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGC---TTCGCG----- 177
||| | | || ||||||| || ||||||| ||| || | | | || ||
Sbjct 826 ACCCTCAGGTATAAGGCCGCCATTAACCGGGGTTTCCTTCTACACCAAATTTACGACAAT 767
Query 178 TTAGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCA 237
|||| || || |||||| ||||||||||||||| |||||| | |||| | |
Sbjct 766 TTAGTTA----TTTCCGTTAACCAGCCGGCACCGGGCAGGTATCACACTCAATACTTAGA 711
Query 238 CTT-TC--GTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278
|| || | |||||| ||||||||||||| | ||||||||||
Sbjct 710 TTTATCATCTTTTTGCAAAGTGCTGTGTTTTAATTAAACAGTCG 667
>seq8043
Length=1063
Score = 116 bits (128), Expect = 9e-24
Identities = 197/282 (70%), Gaps = 10/282 (4%)
Strand=Plus/Minus
Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66
|| |||| |||| ||||| ||| ||||||||||||| | | ||||||||
Sbjct 795 TAAACTGTATCTGCACAGTTATTCCAATTTCACTGAGCCAATCATTGAGACAGCTGTTGT 736
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126
||||||| ||||| |||| | | | | ||| | | ||||| ||| |||||||||||||
Sbjct 735 ATCGTTAAATCATTCATGCAAGACCGCATTTAACGGCCAAGGTATTCCGCTACCTTAGGA 676
Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAA----GAGCTT---CGCGTT 179
|| | || | || ||||||| || | ||||| ||| |||| ||||| ||
Sbjct 675 CCCTCATAGGTAAGGCCGCCATTGATCGGGGTTTCCTTCAAAGCCAAGCTTATATTAGTC 616
Query 180 AGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACT 239
| || | | ||| |||||| ||| || ||||||| |||||| | |||| | | |
Sbjct 615 AACTTAGCAAATCCGTTAACCAGCCGACATCGGGCAGAAATCACACTCAATACTTTGATT 556
Query 240 T-TCGTGTT--TGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278
| | | || ||||||||||| |||||| | ||||||||||
Sbjct 555 TATTATCTTACTGCAGAGTGCTTTGTTTTAATTAAACAGTCG 514
>seq8708
Length=2701
Score = 98.7 bits (108), Expect = 3e-18
Identities = 188/271 (69%), Gaps = 6/271 (2%)
Strand=Plus/Minus
Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCA-TCGT 71
|||| ||||| | ||| ||||||||||||| |||||||||| | | ||||
Sbjct 1898 GCATTTTCACCTCCATTGTAATTTCACTGAGTTCATCTTGGAGACAGCTAGGGAAATCGT 1839
Query 72 TACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 131
||| |||||| |||| | | | ||| | ||||| ||| ||||||||||| |||||
Sbjct 1838 TACACCATTCATGCAAGACTATAATTAGTAGCCAAGGTATTACGCTACCTTAGAACCGTC 1779
Query 132 ATTGTTACGGCCGCCGTTTACC-GGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCA 190
| |||||||| |||||||||| | || || || | || ||| | |
Sbjct 1778 AAGGTTACGGCTGCCGTTTACCTTTAGATTTAAT-AAAATTTTATAGTTTTTTTTATTTA 1720
Query 191 TCAA-TTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTC--CACTTTCGTGTT 247
| || || || ||||||||||||| |||| ||| ||||| || || || || ||
Sbjct 1719 TTAATTTTTTCTAATGGCACCGGGCAGGTGTCAGACCTTATACATCAACATTTAGGTTTT 1660
Query 248 TGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278
|||| || ||||||||| | ||||||||||
Sbjct 1659 TGCAAGGTCCTGTGTTTTAAGTAAACAGTCG 1629
>seq1759
Length=2292
Score = 96.9 bits (106), Expect = 9e-18
Identities = 115/155 (74%), Gaps = 1/155 (1%)
Strand=Plus/Plus
Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66
|| || |||||| ||| || | ||||||||||||||| | ||||||||||| |||
Sbjct 317 TAAACCGCATCTGCACGGCTAATTCAATTTCACTGAGATGCTTGTGGAGACAGCAGGGCC 376
Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126
| |||||| ||||| |||||| | | ||| | |||||||||||||||| || ||
Sbjct 377 A-CGTTACCTCATTCATGCAGGACCACATTTAATGGCCAAGGAATTTCGCTACTTTCAGA 435
Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTC 161
| |||| |||| | ||||| || ||| ||| ||
Sbjct 436 TCCTTATAGTTAAGACCGCCATTCACCATGGCATC 470
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260687549248
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |