Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq2390 140 8e-31 seq6591 122 2e-25 seq8043 116 9e-24 seq8708 98.7 3e-18 seq1759 96.9 9e-18 >seq2390 Length=2302 Score = 140 bits (154), Expect = 8e-31 Identities = 199/277 (72%), Gaps = 11/277 (4%) Strand=Plus/Minus Query 11 CTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCG 70 ||| |||| |||||| ||| ||||||||||||||| | |||||||| |||| Sbjct 1384 CTGTATCTGCACAGCTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGTATCG 1325 Query 71 TTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 130 |||| |||||| |||| | | | | ||| | | ||||| ||||||||||||||||||| | Sbjct 1324 TTACACCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGACCCT 1265 Query 131 TATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCA 190 | |||| ||||||| || ||||||| ||| |||| | | ||||| | | | Sbjct 1264 CA-CGTTAAGGCCGCCTTTAACCGGGGGTTCTGTCAACATC-AAATGTTAGATCATTTAA 1207 Query 191 TCA-----ATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTG 245 | | ||||||| |||||||||||||| |||||| ||||| | | ||| | Sbjct 1206 TTATCTTCATTAACCAGCCGGCACCGGGCAGATTTCACACTTTATACATAGATTTTTTTA 1147 Query 246 TTT----GCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 | | ||| ||||||||||||| | |||||||||| Sbjct 1146 TCTTTAAGCAAAGTGCTGTGTTTTAATTAAACAGTCG 1110 >seq6591 Length=2343 Score = 122 bits (134), Expect = 2e-25 Identities = 200/284 (70%), Gaps = 16/284 (6%) Strand=Plus/Minus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 || |||| |||| ||||| ||| ||||||||| ||||| | |||||||| Sbjct 946 TAAACTGTATCTGCACAGTTATTCCAATTTCACAGAGTCAATCATAGAGACAGCTGTTGT 887 Query 67 ATCGTTACGCCATTCGTGCAG-GTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGG 125 |||||||| |||||| |||| | | | | ||| | | ||||| ||| |||||||||||| Sbjct 886 ATCGTTACACCATTCATGCAAAGACCGCATTTAACGGCCAAGGTATTCCGCTACCTTAGG 827 Query 126 ACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGC---TTCGCG----- 177 ||| | | || ||||||| || ||||||| ||| || | | | || || Sbjct 826 ACCCTCAGGTATAAGGCCGCCATTAACCGGGGTTTCCTTCTACACCAAATTTACGACAAT 767 Query 178 TTAGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCA 237 |||| || || |||||| ||||||||||||||| |||||| | |||| | | Sbjct 766 TTAGTTA----TTTCCGTTAACCAGCCGGCACCGGGCAGGTATCACACTCAATACTTAGA 711 Query 238 CTT-TC--GTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 || || | |||||| ||||||||||||| | |||||||||| Sbjct 710 TTTATCATCTTTTTGCAAAGTGCTGTGTTTTAATTAAACAGTCG 667 >seq8043 Length=1063 Score = 116 bits (128), Expect = 9e-24 Identities = 197/282 (70%), Gaps = 10/282 (4%) Strand=Plus/Minus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 || |||| |||| ||||| ||| ||||||||||||| | | |||||||| Sbjct 795 TAAACTGTATCTGCACAGTTATTCCAATTTCACTGAGCCAATCATTGAGACAGCTGTTGT 736 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||||||| ||||| |||| | | | | ||| | | ||||| ||| ||||||||||||| Sbjct 735 ATCGTTAAATCATTCATGCAAGACCGCATTTAACGGCCAAGGTATTCCGCTACCTTAGGA 676 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAA----GAGCTT---CGCGTT 179 || | || | || ||||||| || | ||||| ||| |||| ||||| || Sbjct 675 CCCTCATAGGTAAGGCCGCCATTGATCGGGGTTTCCTTCAAAGCCAAGCTTATATTAGTC 616 Query 180 AGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACT 239 | || | | ||| |||||| ||| || ||||||| |||||| | |||| | | | Sbjct 615 AACTTAGCAAATCCGTTAACCAGCCGACATCGGGCAGAAATCACACTCAATACTTTGATT 556 Query 240 T-TCGTGTT--TGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 | | | || ||||||||||| |||||| | |||||||||| Sbjct 555 TATTATCTTACTGCAGAGTGCTTTGTTTTAATTAAACAGTCG 514 >seq8708 Length=2701 Score = 98.7 bits (108), Expect = 3e-18 Identities = 188/271 (69%), Gaps = 6/271 (2%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCA-TCGT 71 |||| ||||| | ||| ||||||||||||| |||||||||| | | |||| Sbjct 1898 GCATTTTCACCTCCATTGTAATTTCACTGAGTTCATCTTGGAGACAGCTAGGGAAATCGT 1839 Query 72 TACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 131 ||| |||||| |||| | | | ||| | ||||| ||| ||||||||||| ||||| Sbjct 1838 TACACCATTCATGCAAGACTATAATTAGTAGCCAAGGTATTACGCTACCTTAGAACCGTC 1779 Query 132 ATTGTTACGGCCGCCGTTTACC-GGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCA 190 | |||||||| |||||||||| | || || || | || ||| | | Sbjct 1778 AAGGTTACGGCTGCCGTTTACCTTTAGATTTAAT-AAAATTTTATAGTTTTTTTTATTTA 1720 Query 191 TCAA-TTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTC--CACTTTCGTGTT 247 | || || || ||||||||||||| |||| ||| ||||| || || || || || Sbjct 1719 TTAATTTTTTCTAATGGCACCGGGCAGGTGTCAGACCTTATACATCAACATTTAGGTTTT 1660 Query 248 TGCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 |||| || ||||||||| | |||||||||| Sbjct 1659 TGCAAGGTCCTGTGTTTTAAGTAAACAGTCG 1629 >seq1759 Length=2292 Score = 96.9 bits (106), Expect = 9e-18 Identities = 115/155 (74%), Gaps = 1/155 (1%) Strand=Plus/Plus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 || || |||||| ||| || | ||||||||||||||| | ||||||||||| ||| Sbjct 317 TAAACCGCATCTGCACGGCTAATTCAATTTCACTGAGATGCTTGTGGAGACAGCAGGGCC 376 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 | |||||| ||||| |||||| | | ||| | |||||||||||||||| || || Sbjct 377 A-CGTTACCTCATTCATGCAGGACCACATTTAATGGCCAAGGAATTTCGCTACTTTCAGA 435 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTC 161 | |||| |||| | ||||| || ||| ||| || Sbjct 436 TCCTTATAGTTAAGACCGCCATTCACCATGGCATC 470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260687549248