Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= AAMG01000811.1
Length=502
Score E
Sequences producing significant alignments: (Bits) Value
seq8817 253 6e-65
seq2391 96.9 1e-17
seq4021 82.4 2e-13
seq4677 78.8 3e-12
>seq8817
Length=1178
Score = 253 bits (280), Expect = 6e-65
Identities = 216/264 (82%), Gaps = 2/264 (1%)
Strand=Plus/Plus
Query 63 GGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTCTA 122
|||||||||||| |||| |||||||||||||||| |||||||| | || |||||
Sbjct 257 GGTTTAATTCGATGCAAAGCGAAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTT 316
Query 123 GAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCT 182
|| | || || | || |||||| || | ||||||| ||||||| ||||| |||||
Sbjct 317 GAAAGAGGGGGGTGCC-TTCGGGA-ACGCGGACACAGGTGGTGCATGGCTGTCGACAGCT 374
Query 183 CGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCA 242
|||| ||| || ||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct 375 CGTGCCGTAAGGTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGTGTTTAGTTGCCA 434
Query 243 TCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGA 302
||||| |||| || || || | |||||||||||| || ||||||||||||| ||| ||
Sbjct 435 TCATTGAGTTTGGAACCCTGAACAGACTGCCGGTGATAAGCCGGAGGAAGGTGAGGATGA 494
Query 303 CGTCAAATCATCATGCCCCTTATG 326
||||||||||||||||||||||||
Sbjct 495 CGTCAAATCATCATGCCCCTTATG 518
>seq2391
Length=2334
Score = 96.9 bits (106), Expect = 1e-17
Identities = 143/198 (72%), Gaps = 6/198 (3%)
Strand=Plus/Plus
Query 296 GGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGAC 355
||||| | | ||| |||||||| || | || | ||||||||| |||||| ||| || |
Sbjct 1859 GGGACTAAGACAAGTCATCATGGCCTTAATATTGTGGGCTACAGACGTGCCACA-TGTTC 1917
Query 356 AATA-CAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGT-TCTCAGTT 413
||| ||||| | |||||| ||||| | ||| |||| || ||| || | | ||
Sbjct 1918 CATAACAAAGAGATGCGAAAATGCGAGTTTTAGCTAATCTCACAAAAATGGATAAAAATT 1977
Query 414 C---GGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATC 470
||||||||| ||| |||||| || ||||| | ||| |||||||||||| |||
Sbjct 1978 ATATGGATTGTAGCCTGTAACTCGGCTGCATGAATAAGAAATTGCTAGTAATCGTGAATC 2037
Query 471 AGCATGCTACGGTGAATA 488
| |||| ||||||||||
Sbjct 2038 ACCATGTCACGGTGAATA 2055
>seq4021
Length=1332
Score = 82.4 bits (90), Expect = 2e-13
Identities = 128/182 (70%), Gaps = 1/182 (1%)
Strand=Plus/Plus
Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365
||| |||||||| || | || | ||||||| | |||||| ||| | | ||||||||
Sbjct 1089 CAAGTCATCATGGCCTTAATATTGTGGGCTATAGACGTGCCACATAAGCCTATACAAAGA 1148
Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTC 425
| || ||| | || | |||||||| | ||| | | | |||||||||||
Sbjct 1149 GATGCAAAAATGTGAATTTTAGCAAATCTCCAAAATAGGAAATAAAAA-GGATTGTAGTC 1207
Query 426 TGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGA 485
|| || ||||||| ||||| | ||| ||||||||||| |||| |||| |||||||
Sbjct 1208 TGAAATTCGACTACATGAATAAGTAATTACTAGTAATCGTGAATCACCATGTCACGGTGA 1267
Query 486 AT 487
||
Sbjct 1268 AT 1269
>seq4677
Length=546
Score = 78.8 bits (86), Expect = 3e-12
Identities = 134/193 (69%), Gaps = 1/193 (1%)
Strand=Plus/Minus
Query 296 GGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGAC 355
||||| | | ||| |||||||| || | ||| | ||||| | | |||||| ||| |
Sbjct 389 GGGACTAAGACAAGTCATCATGGCCTTAATGTTGTGGGCGATAGACGTGCCACATATTCC 330
Query 356 AATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCAT-AAAGTTGTTCTCAGTTC 414
||||||| | |||||| | || | ||| |||| || ||||| | |
Sbjct 329 TATACAAAATGATGCGAAAATGTGAATTTTAGCTAATCTAATTAAAGTAGGATATAACAA 270
Query 415 GGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCA 474
||||||||||||| || ||||||| ||||| ||||| ||||||||||| |||| ||
Sbjct 269 GGATTGTAGTCTGAAATTCGACTACATGAATAAGGAATTACTAGTAATCGTGAATCACCA 210
Query 475 TGCTACGGTGAAT 487
| |||||| ||
Sbjct 209 CGTCACGGTGGAT 197
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1503865858240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |