Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq8817 253 6e-65 seq2391 96.9 1e-17 seq4021 82.4 2e-13 seq4677 78.8 3e-12 >seq8817 Length=1178 Score = 253 bits (280), Expect = 6e-65 Identities = 216/264 (82%), Gaps = 2/264 (1%) Strand=Plus/Plus Query 63 GGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTCTA 122 |||||||||||| |||| |||||||||||||||| |||||||| | || ||||| Sbjct 257 GGTTTAATTCGATGCAAAGCGAAGAACCTTACCAGGGCTTGACATGCCGCGAATCCTCTT 316 Query 123 GAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCT 182 || | || || | || |||||| || | ||||||| ||||||| ||||| ||||| Sbjct 317 GAAAGAGGGGGGTGCC-TTCGGGA-ACGCGGACACAGGTGGTGCATGGCTGTCGACAGCT 374 Query 183 CGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCA 242 |||| ||| || ||||||||||||||||||||||||||||||||| | |||||||||| Sbjct 375 CGTGCCGTAAGGTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGTGTTTAGTTGCCA 434 Query 243 TCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGA 302 ||||| |||| || || || | |||||||||||| || ||||||||||||| ||| || Sbjct 435 TCATTGAGTTTGGAACCCTGAACAGACTGCCGGTGATAAGCCGGAGGAAGGTGAGGATGA 494 Query 303 CGTCAAATCATCATGCCCCTTATG 326 |||||||||||||||||||||||| Sbjct 495 CGTCAAATCATCATGCCCCTTATG 518 >seq2391 Length=2334 Score = 96.9 bits (106), Expect = 1e-17 Identities = 143/198 (72%), Gaps = 6/198 (3%) Strand=Plus/Plus Query 296 GGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGAC 355 ||||| | | ||| |||||||| || | || | ||||||||| |||||| ||| || | Sbjct 1859 GGGACTAAGACAAGTCATCATGGCCTTAATATTGTGGGCTACAGACGTGCCACA-TGTTC 1917 Query 356 AATA-CAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGT-TCTCAGTT 413 ||| ||||| | |||||| ||||| | ||| |||| || ||| || | | || Sbjct 1918 CATAACAAAGAGATGCGAAAATGCGAGTTTTAGCTAATCTCACAAAAATGGATAAAAATT 1977 Query 414 C---GGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATC 470 ||||||||| ||| |||||| || ||||| | ||| |||||||||||| ||| Sbjct 1978 ATATGGATTGTAGCCTGTAACTCGGCTGCATGAATAAGAAATTGCTAGTAATCGTGAATC 2037 Query 471 AGCATGCTACGGTGAATA 488 | |||| |||||||||| Sbjct 2038 ACCATGTCACGGTGAATA 2055 >seq4021 Length=1332 Score = 82.4 bits (90), Expect = 2e-13 Identities = 128/182 (70%), Gaps = 1/182 (1%) Strand=Plus/Plus Query 306 CAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGG 365 ||| |||||||| || | || | ||||||| | |||||| ||| | | |||||||| Sbjct 1089 CAAGTCATCATGGCCTTAATATTGTGGGCTATAGACGTGCCACATAAGCCTATACAAAGA 1148 Query 366 GCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTC 425 | || ||| | || | |||||||| | ||| | | | ||||||||||| Sbjct 1149 GATGCAAAAATGTGAATTTTAGCAAATCTCCAAAATAGGAAATAAAAA-GGATTGTAGTC 1207 Query 426 TGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGA 485 || || ||||||| ||||| | ||| ||||||||||| |||| |||| ||||||| Sbjct 1208 TGAAATTCGACTACATGAATAAGTAATTACTAGTAATCGTGAATCACCATGTCACGGTGA 1267 Query 486 AT 487 || Sbjct 1268 AT 1269 >seq4677 Length=546 Score = 78.8 bits (86), Expect = 3e-12 Identities = 134/193 (69%), Gaps = 1/193 (1%) Strand=Plus/Minus Query 296 GGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGAC 355 ||||| | | ||| |||||||| || | ||| | ||||| | | |||||| ||| | Sbjct 389 GGGACTAAGACAAGTCATCATGGCCTTAATGTTGTGGGCGATAGACGTGCCACATATTCC 330 Query 356 AATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCAT-AAAGTTGTTCTCAGTTC 414 ||||||| | |||||| | || | ||| |||| || ||||| | | Sbjct 329 TATACAAAATGATGCGAAAATGTGAATTTTAGCTAATCTAATTAAAGTAGGATATAACAA 270 Query 415 GGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCA 474 ||||||||||||| || ||||||| ||||| ||||| ||||||||||| |||| || Sbjct 269 GGATTGTAGTCTGAAATTCGACTACATGAATAAGGAATTACTAGTAATCGTGAATCACCA 210 Query 475 TGCTACGGTGAAT 487 | |||||| || Sbjct 209 CGTCACGGTGGAT 197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503865858240