Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq7267 176 5e-42
seq7184 152 6e-35
seq2372 149 7e-34
seq926 149 7e-34
seq1957 131 2e-28
seq2520 96.9 4e-18
>seq7267
Length=1316
Score = 176 bits (194), Expect = 5e-42
Identities = 158/193 (82%), Gaps = 4/193 (2%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||
Sbjct 843 CTAGAAACCAACAAAATAGAACCACACGTCCTATTTCATTATTCCATGCTAATGTATTCG 784
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|| || |||||||||||||||||||||||| |||| ||||||||||||||||| | ||
Sbjct 783 AGCATAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCCGACA 724
Query 126 CA-CCAATGAA-GGCATACGGGCTCACCAAGAGG-TAGGGCTGGGTAATGCAGTACTCGC 182
|| ||| |||| ||||| | ||||| ||| ||| ||| | || |||| | |||
Sbjct 723 CACCCAGTGAAGGGCATGC-GGCTCCCCAGAAGGAAAGGCCCGGCCGGACCAGTGCACGC 665
Query 183 CGTGAGGCGGACC 195
||||||||||||
Sbjct 664 GGTGAGGCGGACC 652
>seq7184
Length=1315
Score = 152 bits (168), Expect = 6e-35
Identities = 104/116 (90%), Gaps = 1/116 (1%)
Strand=Plus/Minus
Query 5 TCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC 64
|||||||||||||||||||| ||| ||||||||||| ||||||||||||||| |||||
Sbjct 387 TCTAGAAACCAACAAAATAGAACCGCTCGTCCTATTCTGTTATTCCATGCTAATATATTC 328
Query 65 GGGCGTA-AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119
|||| || |||||||||||||||||||||||| |||| |||| ||||||||||||
Sbjct 327 GGGCCTATGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAATAGTCCTGGTTCC 272
>seq2372
Length=2111
Score = 149 bits (164), Expect = 7e-34
Identities = 102/114 (89%), Gaps = 1/114 (1%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||
Sbjct 1589 CTAGAAACCAACAAAATAGAACCAAACGTCCTATTCTATTATTCCATGCTAATATATTCG 1648
Query 66 GGC-GTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTC 118
|| || |||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct 1649 AGCAATACGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTC 1702
>seq926
Length=4954
Score = 149 bits (164), Expect = 7e-34
Identities = 102/114 (89%), Gaps = 1/114 (1%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||
Sbjct 978 CTAGAAACCAACAAAATAGAACCAAACGTCCTATTCTATTATTCCATGCTAATATATTCG 1037
Query 66 GGC-GTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTC 118
|| || |||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct 1038 AGCAATACGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTC 1091
>seq1957
Length=568
Score = 131 bits (144), Expect = 2e-28
Identities = 92/105 (88%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||
Sbjct 305 CTAGAAACCAACAAAATAGAACCATACGTCCTATTCTATTATTCCATGCTAATATATTCG 246
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110
|| | |||||||||||||||||||||||| |||| ||||| ||
Sbjct 245 AGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAATGT 201
>seq2520
Length=662
Score = 96.9 bits (106), Expect = 4e-18
Identities = 92/113 (81%), Gaps = 6/113 (5%)
Strand=Plus/Plus
Query 7 TAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG 66
|| |||||||||||||| | | ||| |||| ||||||||||||||||||||||| |
Sbjct 309 TATAAACCAACAAAATAAAACCATA-GTCTTATTTTATTATTCCATGCTAATGTATTC-G 366
Query 67 GCGT---AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAA-AAGTCCTGG 115
|| | ||||| |||||||||||||||||||| |||| |||| | ||||||
Sbjct 367 GCTTAAAAAGCCCGCTTTGAACACTCTAATTTTTTCAAAGTAATCATTCCTGG 419
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595148573046
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |