Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq7267 176 5e-42 seq7184 152 6e-35 seq2372 149 7e-34 seq926 149 7e-34 seq1957 131 2e-28 seq2520 96.9 4e-18 >seq7267 Length=1316 Score = 176 bits (194), Expect = 5e-42 Identities = 158/193 (82%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||| Sbjct 843 CTAGAAACCAACAAAATAGAACCACACGTCCTATTTCATTATTCCATGCTAATGTATTCG 784 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 || || |||||||||||||||||||||||| |||| ||||||||||||||||| | || Sbjct 783 AGCATAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTCCCCGACA 724 Query 126 CA-CCAATGAA-GGCATACGGGCTCACCAAGAGG-TAGGGCTGGGTAATGCAGTACTCGC 182 || ||| |||| ||||| | ||||| ||| ||| ||| | || |||| | ||| Sbjct 723 CACCCAGTGAAGGGCATGC-GGCTCCCCAGAAGGAAAGGCCCGGCCGGACCAGTGCACGC 665 Query 183 CGTGAGGCGGACC 195 |||||||||||| Sbjct 664 GGTGAGGCGGACC 652 >seq7184 Length=1315 Score = 152 bits (168), Expect = 6e-35 Identities = 104/116 (90%), Gaps = 1/116 (1%) Strand=Plus/Minus Query 5 TCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC 64 |||||||||||||||||||| ||| ||||||||||| ||||||||||||||| ||||| Sbjct 387 TCTAGAAACCAACAAAATAGAACCGCTCGTCCTATTCTGTTATTCCATGCTAATATATTC 328 Query 65 GGGCGTA-AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119 |||| || |||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct 327 GGGCCTATGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAATAGTCCTGGTTCC 272 >seq2372 Length=2111 Score = 149 bits (164), Expect = 7e-34 Identities = 102/114 (89%), Gaps = 1/114 (1%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||| |||||| Sbjct 1589 CTAGAAACCAACAAAATAGAACCAAACGTCCTATTCTATTATTCCATGCTAATATATTCG 1648 Query 66 GGC-GTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTC 118 || || |||||||||||||||||||||||| |||| |||||||||||||||| Sbjct 1649 AGCAATACGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTC 1702 >seq926 Length=4954 Score = 149 bits (164), Expect = 7e-34 Identities = 102/114 (89%), Gaps = 1/114 (1%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||| |||||| Sbjct 978 CTAGAAACCAACAAAATAGAACCAAACGTCCTATTCTATTATTCCATGCTAATATATTCG 1037 Query 66 GGC-GTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTC 118 || || |||||||||||||||||||||||| |||| |||||||||||||||| Sbjct 1038 AGCAATACGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAAGTCCTGGTTC 1091 >seq1957 Length=568 Score = 131 bits (144), Expect = 2e-28 Identities = 92/105 (88%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||| |||||| Sbjct 305 CTAGAAACCAACAAAATAGAACCATACGTCCTATTCTATTATTCCATGCTAATATATTCG 246 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 || | |||||||||||||||||||||||| |||| ||||| || Sbjct 245 AGCAAAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAATGT 201 >seq2520 Length=662 Score = 96.9 bits (106), Expect = 4e-18 Identities = 92/113 (81%), Gaps = 6/113 (5%) Strand=Plus/Plus Query 7 TAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG 66 || |||||||||||||| | | ||| |||| ||||||||||||||||||||||| | Sbjct 309 TATAAACCAACAAAATAAAACCATA-GTCTTATTTTATTATTCCATGCTAATGTATTC-G 366 Query 67 GCGT---AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAA-AAGTCCTGG 115 || | ||||| |||||||||||||||||||| |||| |||| | |||||| Sbjct 367 GCTTAAAAAGCCCGCTTTGAACACTCTAATTTTTTCAAAGTAATCATTCCTGG 419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595148573046