Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq7267 282 4e-74
seq2372 257 2e-66
seq926 257 2e-66
seq1957 244 1e-62
seq7184 192 6e-47
seq2520 150 2e-34
>seq7267
Length=1316
Score = 282 bits (312), Expect = 4e-74
Identities = 178/191 (93%), Gaps = 1/191 (1%)
Strand=Plus/Plus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct 730 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGAATA 789
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
||||| ||||||||||| ||||||||||| ||||||||||||| ||||||||||||||
Sbjct 790 CATTAGCATGGAATAATGAAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCG- 848
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
|||||||||| |||| ||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 849 CCGTAATGATTAATAGGGATAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 908
Query 181 TTGGATTTATT 191
|||||||||||
Sbjct 909 TTGGATTTATT 919
>seq2372
Length=2111
Score = 257 bits (284), Expect = 2e-66
Identities = 173/191 (91%), Gaps = 2/191 (1%)
Strand=Plus/Minus
Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATA 60
|||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||
Sbjct 1702 GAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTATTGCTCGAATA 1643
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
|||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 1642 TATTAGCATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACC-A 1584
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
||||||||| |||| ||| |||||||| ||||||||||||||||| |||||||||||
Sbjct 1583 TCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 1524
Query 181 TTGGATTTATT 191
|||||||||||
Sbjct 1523 TTGGATTTATT 1513
>seq926
Length=4954
Score = 257 bits (284), Expect = 2e-66
Identities = 173/191 (91%), Gaps = 2/191 (1%)
Strand=Plus/Minus
Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATA 60
|||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||
Sbjct 1091 GAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTATTGCTCGAATA 1032
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
|||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||
Sbjct 1031 TATTAGCATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACC-A 973
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
||||||||| |||| ||| |||||||| ||||||||||||||||| |||||||||||
Sbjct 972 TCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 913
Query 181 TTGGATTTATT 191
|||||||||||
Sbjct 912 TTGGATTTATT 902
>seq1957
Length=568
Score = 244 bits (270), Expect = 1e-62
Identities = 163/180 (91%), Gaps = 1/180 (1%)
Strand=Plus/Plus
Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTACCAT 69
|| ||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||
Sbjct 201 ACATTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATATATTAGCAT 260
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||
Sbjct 261 GGAATAATAGAATAGGACGTATGGTTCTATTTTGTTGGTTTCTAGGACCG-TCGTAATGA 319
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTA 189
| |||| ||| |||||||| |||||||||| |||||| ||||||||||||||||||||
Sbjct 320 TTAATAGGGACGGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTCTTGGATTTA 379
>seq7184
Length=1315
Score = 192 bits (212), Expect = 6e-47
Identities = 157/188 (84%), Gaps = 2/188 (1%)
Strand=Plus/Plus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTG-CTCGAAT 59
|||||||||||| |||||||||||||||||||| |||||||||||||| | | | |||||
Sbjct 272 GGAACCAGGACTATTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCATAGGCCCGAAT 331
Query 60 ACATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCG 119
| |||| |||||||||| ||||||||||| ||||||||||||||| ||||||||| || |
Sbjct 332 ATATTAGCATGGAATAACAGAATAGGACGAGCGGTTCTATTTTGTTGGTTTCTAGAACTG 391
Query 120 CCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATT 179
|||||||||| || | ||| || |||| | | |||||| | | ||||||||||
Sbjct 392 -CCGTAATGATTAACAGGGACAGCCGGGAGCATTAGTATTTGCACGCTAGAGGTGAAATT 450
Query 180 CTTGGATT 187
||||||||
Sbjct 451 CTTGGATT 458
>seq2520
Length=662
Score = 150 bits (166), Expect = 2e-34
Identities = 151/190 (79%), Gaps = 7/190 (4%)
Strand=Plus/Minus
Query 5 CCAGGACTT-TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTT---GCTCGAATA 60
|||||| | |||||||||||||||||||| ||||||||| ||| ||| || ||||||
Sbjct 419 CCAGGAATGATTACTTTGAAAAAATTAGAGTGTTCAAAGCGGGCTTTTTAAGC-CGAATA 361
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
||||| |||||||||||| |||| ||| | |||| |||||||| ||||| || ||
Sbjct 360 CATTAGCATGGAATAATAAAATAAGAC-TATGGTTTTATTTTGTTGGTTTATAAAACTAA 302
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
| |||||| |||| | | || |||| | | |||||| ||| |||| |||||||||||
Sbjct 301 A-GAAATGATGAATAGGTCTGGTTGGGGATATTAGTATTTAATAGTCAGAGGTGAAATTC 243
Query 181 TTGGATTTAT 190
||||||||||
Sbjct 242 TTGGATTTAT 233
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511955761760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |