Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq743 782 0.0 seq3892 389 1e-105 seq6550 365 1e-98 seq5343 143 9e-32 seq1300 143 9e-32 >seq743 Length=2723 Score = 782 bits (866), Expect = 0.0 Identities = 502/541 (93%), Gaps = 9/541 (2%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 2042 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATC 1983 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1982 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 1923 Query 127 GGCCCGCGAA--GGACCTT-AACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCAT 183 |||| |||| ||||||| || || |||| ||| |||| |||| |||||||||| Sbjct 1922 AGCCC-CGAATGGGACCTTGAATGCTAGAACGTGGAAAATGAATTCCAGCTCCGCTTCAT 1864 Query 184 TGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCAC 243 ||| |||||||| |||| |||| ||||||||||||||||| |||||||| |||||||| Sbjct 1863 TGAATAAGTAAAGAAACTATAAAGGTAGTGGTATTTCACTGGCGCCGAA---GCTCCCAC 1807 Query 244 TTATTCTACACCTCTCAA-GTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302 |||||||||||| ||| | ||| ||||||| ||| ||||||||||||||||||||||| Sbjct 1806 TTATTCTACACC-CTCTATGTCTCTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGT 1748 Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 362 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1747 CTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 1688 Query 363 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1687 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 1628 Query 423 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1627 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 1568 Query 483 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCT 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1567 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCT 1508 Query 543 G 543 | Sbjct 1507 G 1507 >seq3892 Length=923 Score = 389 bits (430), Expect = 1e-105 Identities = 215/215 (100%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 329 CCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAA 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAA 60 Query 389 TCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATA 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 TCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATA 120 Query 449 GTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACT 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACT 180 Query 509 GGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||||||||||||| Sbjct 181 GGGCAGAAATCACATTGCGTCAACATCACTTTCTG 215 >seq6550 Length=2425 Score = 365 bits (404), Expect = 1e-98 Identities = 210/215 (98%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 329 CCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAA 388 ||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CCCGTTCCCACGGCTATCGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAA 60 Query 389 TCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATA 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 TCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATA 120 Query 449 GTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACT 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACT 180 Query 509 GGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||| ||||||||| Sbjct 181 GGGCAGAAATCACATTGCGTCAACACCACTTTCTG 215 >seq5343 Length=518 Score = 143 bits (158), Expect = 9e-32 Identities = 88/94 (94%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 509 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATC 450 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCC 100 ||||||||||||||||||||||||||||||| || Sbjct 449 GTTTAACAGATGTGCCGCCCCAGCCAAACTCTCC 416 >seq1300 Length=562 Score = 143 bits (158), Expect = 9e-32 Identities = 88/94 (94%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 526 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATC 467 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCC 100 ||||||||||||||||||||||||||||||| || Sbjct 466 GTTTAACAGATGTGCCGCCCCAGCCAAACTCTCC 433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635054156512