Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq743 782 0.0
seq3892 389 1e-105
seq6550 365 1e-98
seq5343 143 9e-32
seq1300 143 9e-32
>seq743
Length=2723
Score = 782 bits (866), Expect = 0.0
Identities = 502/541 (93%), Gaps = 9/541 (2%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct 2042 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATC 1983
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1982 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 1923
Query 127 GGCCCGCGAA--GGACCTT-AACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCAT 183
|||| |||| ||||||| || || |||| ||| |||| |||| ||||||||||
Sbjct 1922 AGCCC-CGAATGGGACCTTGAATGCTAGAACGTGGAAAATGAATTCCAGCTCCGCTTCAT 1864
Query 184 TGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCAC 243
||| |||||||| |||| |||| ||||||||||||||||| |||||||| ||||||||
Sbjct 1863 TGAATAAGTAAAGAAACTATAAAGGTAGTGGTATTTCACTGGCGCCGAA---GCTCCCAC 1807
Query 244 TTATTCTACACCTCTCAA-GTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302
|||||||||||| ||| | ||| ||||||| ||| |||||||||||||||||||||||
Sbjct 1806 TTATTCTACACC-CTCTATGTCTCTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGT 1748
Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 362
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1747 CTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 1688
Query 363 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1687 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 1628
Query 423 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1627 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 1568
Query 483 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCT 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1567 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCT 1508
Query 543 G 543
|
Sbjct 1507 G 1507
>seq3892
Length=923
Score = 389 bits (430), Expect = 1e-105
Identities = 215/215 (100%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 329 CCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAA 388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 CCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAA 60
Query 389 TCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATA 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 TCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATA 120
Query 449 GTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACT 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 GTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACT 180
Query 509 GGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
|||||||||||||||||||||||||||||||||||
Sbjct 181 GGGCAGAAATCACATTGCGTCAACATCACTTTCTG 215
>seq6550
Length=2425
Score = 365 bits (404), Expect = 1e-98
Identities = 210/215 (98%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 329 CCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAA 388
||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 CCCGTTCCCACGGCTATCGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAA 60
Query 389 TCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATA 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 TCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATA 120
Query 449 GTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACT 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 GTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACT 180
Query 509 GGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
||||||||||||||||||||||||| |||||||||
Sbjct 181 GGGCAGAAATCACATTGCGTCAACACCACTTTCTG 215
>seq5343
Length=518
Score = 143 bits (158), Expect = 9e-32
Identities = 88/94 (94%), Gaps = 0/94 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct 509 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATC 450
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCC 100
||||||||||||||||||||||||||||||| ||
Sbjct 449 GTTTAACAGATGTGCCGCCCCAGCCAAACTCTCC 416
>seq1300
Length=562
Score = 143 bits (158), Expect = 9e-32
Identities = 88/94 (94%), Gaps = 0/94 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct 526 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATC 467
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCC 100
||||||||||||||||||||||||||||||| ||
Sbjct 466 GTTTAACAGATGTGCCGCCCCAGCCAAACTCTCC 433
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635054156512
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |