Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq743 221 2e-55
seq6464 214 3e-53
seq8612 107 3e-21
seq654 104 4e-20
seq7823 84.2 4e-14
seq8069 80.6 4e-13
>seq743
Length=2723
Score = 221 bits (244), Expect = 2e-55
Identities = 230/293 (78%), Gaps = 18/293 (6%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||| | | ||| || |||||||||||||||||||||||| |||||| |
Sbjct 2366 GTACGAGAGGAACAGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 2423
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct 2424 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 2483
Query 121 GAACGGGGTGA-TTCTCTCCT--GCACATCGTAGTCGGATACGAAT-AGGCTT------- 169
||||| ||||| |||| | || |||| ||| |||||||||| |||| |
Sbjct 2484 GAACGCGGTGATTTCTTTGCTCCACACAATATAGATGGATACGAATAAGGCGTCCTTGTG 2543
Query 170 -CGGCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTC 225
|| | | ||||| |||||||| ||||||| || |||||| || ||| |||
Sbjct 2544 GCGTCGCTGAACCATAGCAGGCTAGCAACGGTGCACTTGGCGGAAAGGCCTTGGGTGCT- 2602
Query 226 AGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||||| |||||||| ||| |||| |||||||||| |||| | |||||
Sbjct 2603 TGCTGGCGAATTGCAATGTCATTTTGCGTGGGGATAAATCATTTGTATACGAC 2655
>seq6464
Length=441
Score = 214 bits (236), Expect = 3e-53
Identities = 220/282 (78%), Gaps = 13/282 (5%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| || |||||| |||||||||||||||| |||| |||| ||||||
Sbjct 275 GTACGAGAGGAACCGCTGA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACCGGGCAGT 218
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 217 GCCGCGACGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 158
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||| |||||| | | || |||| | || ||| | |||||||||||||| |
Sbjct 157 GAACGCGGTGATAC-CACCCGCACGT-ACAGATGGACAAGAATAGGCTTCGGCTTTGTGT 100
Query 181 CTTAGCAGGC----CGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGAT 236
|| ||||||| | |||| || |||||| | || | | ||| ||
Sbjct 99 CTCAGCAGGCGATTTCTCCACGG-----CCACGGAAGAGTGGTCTTGGTATTTCGCGTAT 45
Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|| ||||||| || | || ||| ||||||||||||||||||
Sbjct 44 TGTAATTTCAACACGAGCGGGGTCAAATCCTTTGCAGACGAC 3
>seq8612
Length=762
Score = 107 bits (118), Expect = 3e-21
Identities = 96/118 (81%), Gaps = 2/118 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| || |||||| |||||||| ||||| | || ||| | |||||
Sbjct 370 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTATTTGCTGTTGCTTGAAAAAGCAGT 427
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118
|| ||||||||||||||||| || || ||||||||||||||||| ||| || |||
Sbjct 428 GCAGCGAAGCTACCATCTGCCGGTGTACAGCTGAACGCCTCTAAGTTGGAAACCGTGC 485
>seq654
Length=570
Score = 104 bits (114), Expect = 4e-20
Identities = 93/114 (82%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | ||||| | || | || |||| || || |
Sbjct 185 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCCAAT 128
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 127 GGGGCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 74
>seq7823
Length=298
Score = 84.2 bits (92), Expect = 4e-14
Identities = 70/86 (81%), Gaps = 0/86 (0%)
Strand=Plus/Minus
Query 28 TAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTA 87
|||||||| || || | |||| | |||||||| |||||||||||| ||| ||| |
Sbjct 289 TAATTGGTCTTGGCCGTTGTCCAATTGGGCAGTGCGGCGAAGCTACCACACGCTAGATAA 230
Query 88 TGGCTGAACGCCTCTAAGTCAGAATC 113
|||||||||||||||||| |||||||
Sbjct 229 TGGCTGAACGCCTCTAAGCCAGAATC 204
>seq8069
Length=230
Score = 80.6 bits (88), Expect = 4e-13
Identities = 92/124 (74%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 54 AGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113
||| | ||| |||||||||||| |||| |||| ||||||| ||| ||| ||||||
Sbjct 154 AGGTACTGCGGCGAAGCTACCACCTGCGGGATACGGGCTGAATGCCGTGAAGCGAGAATC 95
Query 114 CATGCCAGAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGC 173
| |||| | | |||||| | ||| ||| |||||| |||||| ||||||| || |
Sbjct 94 CTGGCCATACGGAGGTGATGTTTTCCAACACTTCGTAGGCGGATAGGAATAGGTCTCTGG 35
Query 174 CCCG 177
||||
Sbjct 34 CCCG 31
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819129218816
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |