Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_031906.1
Length=198190
Score E
Sequences producing significant alignments: (Bits) Value
seq8857 536 2e-147
seq7678 360 2e-94
seq7307 226 4e-54
seq7318 221 2e-52
>seq8857
Length=8770
Score = 536 bits (594), Expect = 2e-147
Identities = 719/989 (73%), Gaps = 12/989 (1%)
Strand=Plus/Minus
Query 188851 TTCTGCGAATGGGTCACCTCTACTAACAACCGTCTGTATGTCGGTTGGTTCGGTGTCCTG 188910
||||| | ||| | ||| ||| | ||||| || || | || ||||| ||||| ||
Sbjct 6430 TTCTGTAACTGGATAACCAGCACTGAAAACCGCCTTTACATTGGATGGTTTGGTGTTTTG 6371
Query 188911 ATGATCCCTACGCTTCTCG-CTGCAACCATCTGC-TTCATCGTCGCCTTTGTCGCTGCAC 188968
||||||||||| ||| | | | ||||| |||| || ||| | ||||| | ||||| |
Sbjct 6370 ATGATCCCTAC-CTTATTGACCGCAACT-TCTGTATTTATCATAGCCTTCATTGCTGCTC 6313
Query 188969 CCCCTGTAGACATTGATGGCATCCGCGAACCCGTCGCTGGTTCACTCATGTATGGAAACA 189028
| || ||||| |||||||| || || ||||| || |||| || | | || |||||||
Sbjct 6312 CTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTGCTTTACGGAAACA 6253
Query 189029 ACATCATCTCTGGTGCTGTTGTCCCTTCATCCAACGCAATTGGTCTTCACTTCTACCCCA 189088
| || ||||| ||||| || | ||| | || || || ||| | ||||| || || |
Sbjct 6252 ATATTATCTCCGGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTATCCAA 6193
Query 189089 TCTGGGAAGCCGCCTCACTCGATGAGTGGCTCTACAACGGTGGTCCTTTCCAACTGGTAG 189148
| |||||||| || || | ||||| ||| | ||||| |||||||||| | || | |
Sbjct 6192 TATGGGAAGCGGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTG 6133
Query 189149 TCTTCCACTTCCTCATCGGCATCTACGCCT---ACATGGGTCGTGAGTGGGAACTCTCTT 189205
| | |||||| | | || | || || | |||||||||||||||||||||| ||
Sbjct 6132 TTCTACACTTCTTACTAGG--TGTA-GCTTGTTACATGGGTCGTGAGTGGGAACTGAGTT 6076
Query 189206 ACCGTCTCGGTATGCGTCCTTGGATCTGCA-TTGCTTACTCTGCACCTGTTGCAGCAGCA 189264
|||||| |||||||| |||||||| ||| |||| || || || ||||||||||| ||
Sbjct 6075 TCCGTCTGGGTATGCGCCCTTGGAT-TGCTGTTGCGTATTCAGCTCCTGTTGCAGCTGCT 6017
Query 189265 TCCGCAGTCTTTCTGGTCTATCCTTTTGGTCAAGGTTCTTTCTCTGACGCAATGCCCTTG 189324
| || || || || | || || |||||||||| || ||||| | ||||| |
Sbjct 6016 ACTGCTGTTTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTA 5957
Query 189325 GGTATCAGTGGAACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATG 189384
|| || ||| || ||||||| ||| |||| ||||| || || ||||||||||| |||
Sbjct 5956 GGCATTTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAACACAACATCCTTATG 5897
Query 189385 CACCCCTTCCACATGCTGGGAGTCGCAGGTGTCTTCGGTGGTTCACTGTTCTCCGCAATG 189444
||||| || |||||| | || || || ||||| || ||||| || || || || |||
Sbjct 5896 CACCCATTTCACATGTTAGGTGTAGCTGGTGTATTTGGTGGCTCCCTATTTAGTGCTATG 5837
Query 189445 CATGGTTCACTCGTTACCTCTTCACTGGTTCGTGAAACCACTGAAACCGAGTCCCAGAAC 189504
|||||||| | || || ||| || | | ||||| || |||| || || ||
Sbjct 5836 CATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAAT 5777
Query 189505 TATGGTTACAAGTTTGGACAAGAAGAAGAAACGTACAACATCGTTGCTGCTCATGGATAT 189564
| |||||||| || || ||||| |||||||| || || || || ||||||||||| |||
Sbjct 5776 GAAGGTTACAAATTCGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTAT 5717
Query 189565 TTCGGTCGTCTTATCTTCCAATATGCATCGTTCAACAACTCCCGTTCACTTCACTTCTTC 189624
|| || || | ||||||||||||||| ||||||||||| ||||| | || ||||||
Sbjct 5716 TTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAACTCTCGTTCTTTACATTTCTTC 5657
Query 189625 CTCGCTGCCTGGCCAGTCGTGGGTATCTGGTTTACCGCCCTCGGCGTCAGCACCATGGCA 189684
| ||||| ||||| || | ||||| |||||||| || | || | || || |||||
Sbjct 5656 TTAGCTGCTTGGCCCGTTATCGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCT 5597
Query 189685 TTCAACCTCAATGGGTTCAACTTCAATCAATCCATTCTTGATGGTCAAGGTCGTGTTCTG 189744
||||| | ||||| ||||| ||||||||||| | ||||| ||||||||||||| |
Sbjct 5596 TTCAATTTAAATGGTTTCAATTTCAATCAATCTGTAGTTGATAGTCAAGGTCGTGTAATT 5537
Query 189745 AACACATGGGCAGACGTTCTCAACCGTGCTGGTCTTGGTATGGAAGTCATGCATGAGCGT 189804
|| || || || || | | ||||| ||| |||||||||||||| |||||||| |||
Sbjct 5536 AATACCTGAGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGT 5477
Query 189805 AACGCTCACAACTTCCCTCTTGATCTGGC 189833
|| ||||| ||||||||||| || || ||
Sbjct 5476 AATGCTCATAACTTCCCTCTAGACCTAGC 5448
>seq7678
Length=557
Score = 360 bits (398), Expect = 2e-94
Identities = 339/432 (78%), Gaps = 0/432 (0%)
Strand=Plus/Minus
Query 189444 GCATGGTTCACTCGTTACCTCTTCACTGGTTCGTGAAACCACTGAAACCGAGTCCCAGAA 189503
||| ||||| | ||||| || || |||| ||||||||||| |||||||| || || ||
Sbjct 552 GCACGGTTCCTTGGTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAA 493
Query 189504 CTATGGTTACAAGTTTGGACAAGAAGAAGAAACGTACAACATCGTTGCTGCTCATGGATA 189563
||| ||||||||||| ||||||||||||||||| ||||||||||| ||||| || || ||
Sbjct 492 CTACGGTTACAAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTA 433
Query 189564 TTTCGGTCGTCTTATCTTCCAATATGCATCGTTCAACAACTCCCGTTCACTTCACTTCTT 189623
|| ||||| | ||||||||||| || || ||||||||| ||||||||| ||||||||
Sbjct 432 CTTTGGTCGGTTGATCTTCCAATACGCTTCCTTCAACAACAGCCGTTCACTGCACTTCTT 373
Query 189624 CCTCGCTGCCTGGCCAGTCGTGGGTATCTGGTTTACCGCCCTCGGCGTCAGCACCATGGC 189683
| | ||||| |||||||| | ||||||||||||||||| | || ||||||| |||||
Sbjct 372 CTTGGCTGCATGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAATGGC 313
Query 189684 ATTCAACCTCAATGGGTTCAACTTCAATCAATCCATTCTTGATGGTCAAGGTCGTGTTCT 189743
|||||||| || || ||||||||||| ||||| | | ||| ||||||||| || |
Sbjct 312 GTTCAACCTGAACGGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGTCAT 253
Query 189744 GAACACATGGGCAGACGTTCTCAACCGTGCTGGTCTTGGTATGGAAGTCATGCATGAGCG 189803
|| ||||| ||||| ||||||| ||| | ||||||||||||||||| |||||
Sbjct 252 CGCTACTTGGGCTGACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGAGCG 193
Query 189804 TAACGCTCACAACTTCCCTCTTGATCTGGCAGCAGCAGAGTCCACTCCTGTGGCACTCAC 189863
|||||||||||||||||| | || |||| || | || |||||||||| | ||
Sbjct 192 TAACGCTCACAACTTCCCCTTAGACTTGGCTGCTGGTGAAGTTGCTCCTGTGGCTTTAAC 133
Query 189864 CGCTCCCGCAAT 189875
|| || |||||
Sbjct 132 TGCACCTGCAAT 121
>seq7307
Length=548
Score = 226 bits (250), Expect = 4e-54
Identities = 337/478 (71%), Gaps = 0/478 (0%)
Strand=Plus/Plus
Query 190531 TCCACATGATGGGTGTTGCAGGTATCCTGGGAGGAGCACTACTGTCAGCAATCCATGGTG 190590
||||||||||||| || || ||| | || || ||||| ||| ||| || || || || |
Sbjct 1 TCCACATGATGGGAGTAGCGGGTGTACTCGGTGGAGCGCTATTGTGTGCCATTCACGGAG 60
Query 190591 TGACTGTAGAGAATACTTTGTATGAAGATGGTGAACAAGCAAACACGTTTAAAGCATTCG 190650
|| ||||| || || || | |||||| |||||| | | || || || || |||
Sbjct 61 CCACAGTAGAAAACACCTTATTTGAAGACGGTGAAGCATCCAAAACCTTCCGCGCCTTCA 120
Query 190651 ACTCTACACAAGAGGAAGAGACCTATTCGATGGTCACTGCCAACCGTTTCTGGTCTCAAA 190710
||| || |||| ||||| ||||| || ||||| || || ||||| |||||||| || |
Sbjct 121 ACTACACCCAAGCAGAAGAAACCTACTCCATGGTGACAGCGAACCGATTCTGGTCACAGA 180
Query 190711 TCTTTGGTGTTGCGTTCAGTAATAAGAGGTGGTTGCATTTCTTTATGCTCTTTGTTCCTG 190770
| || ||| | || ||| || || ||||||| || ||||| ||||| ||||| || |
Sbjct 181 TATTCGGTATCGCCTTCTCCAACAAACGGTGGTTACACTTCTTCATGCTGTTTGTACCAG 240
Query 190771 TTATGGGTCTGTGGACTTCTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTT 190830
| | || |||||| | || | || || | ||| | || | ||||| || ||||
Sbjct 241 TCACAGGCTTGTGGATGGCGTCAGTAGGAATCGTGGGTTTAGCATTGAACCTCCGGGCTT 300
Query 190831 ATGACTTTGTATCCCAAGAGATCAGAGCAGCAGAAGATCCAGAGTTCGAGACTTTTTACA 190890
| ||||| ||||||||||| | | ||||||||||| ||||| || || || || || |
Sbjct 301 ACGACTTCGTATCCCAAGAATTGCGGGCAGCAGAAGACCCAGAATTTGAAACATTCTATA 360
Query 190891 CAAAAAATATACTTTTGAATGAAGGTCTTCGTTCATGGTTGGCACCTGTTGATCAACCCC 190950
| ||||| || | |||| || ||| | || | ||| |||| ||| ||||| || |
Sbjct 361 CCAAAAACATTTTGCTGAACGAGGGTATCCGCGCTTGGATGGCTCCTCAAGATCAGCCTC 420
Query 190951 ATGAGAATTTTGTATTTCCAGAAGAAGTATTGCCAAGAGGCAACGCTCTGTGATATAC 191008
| || | |||||||| ||||| || || | || | || |||||||| | ||| ||
Sbjct 421 ACGAACAATTTGTATTCCCAGAGGAGGTTCTACCTCGTGGTAACGCTCTCTAATAGAC 478
>seq7318
Length=447
Score = 221 bits (244), Expect = 2e-52
Identities = 255/341 (75%), Gaps = 2/341 (1%)
Strand=Plus/Plus
Query 190368 AATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCTCATCTACCCT 190427
||||| || || || |||||||| || |||||||||||| || ||||| || || ||
Sbjct 1 AATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTTCTAATTTATCCA 60
Query 190428 CTGGGTCAATCGAGTTGGTTCTTCGCGCCATCCTTCGGTGTGGCAGCGATCTTCCGCTTC 190487
|||||||| | ||||||| || ||||| || ||||| ||||| || || ||||||
Sbjct 61 CTGGGTCAGGCTGGTTGGTTTTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGCTTC 120
Query 190488 CTCCTCTTCTTGCAGGGCTTCCATAACTGGACGCTGAACCCCTTCCACATGATGGGTGTT 190547
|||| || || || || || ||||| ||||| ||||||| || || |||||||| |||
Sbjct 121 ATCCTATTTTTTCAAGGGTTTCATAATTGGACCTTGAACCCATTTCATATGATGGGAGTT 180
Query 190548 GCAGGTATCCTGGGAGGAGCACTACTGTCAGCAATCCATGGTGTGACTGTAGAGAATACT 190607
|| ||| | |||| | || || || | || || ||||||| ||| ||||| ||||||
Sbjct 181 GCCGGTGTATTGGGCGCCGCCCTGCTATGCGCTATTCATGGTGCGACGGTAGAAAATACT 240
Query 190608 TTGTATGAAGATGGTGAACAAGCAAACACGTTTAAAGCATTCGACTCTACACAAGAGGAA 190667
|| | |||||||||||| ||||| || || || || || | || |||| |||
Sbjct 241 TTATTTGAAGATGGTGATGGTGCAAATACATTCCGGGCTTTTAACCCAACTCAAGCTGAA 300
Query 190668 GAGACCTATTCGATGGTCACTGCCAACCG-TTTCTGGTCTC 190707
|| || ||||| ||||||||||| ||||| ||||| |||||
Sbjct 301 GAAACTTATTCAATGGTCACTGCTAACCGCTTTCT-GTCTC 340
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 634009308006000
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