Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_031906.1 Length=198190 Score E Sequences producing significant alignments: (Bits) Value seq8857 536 2e-147 seq7678 360 2e-94 seq7307 226 4e-54 seq7318 221 2e-52 >seq8857 Length=8770 Score = 536 bits (594), Expect = 2e-147 Identities = 719/989 (73%), Gaps = 12/989 (1%) Strand=Plus/Minus Query 188851 TTCTGCGAATGGGTCACCTCTACTAACAACCGTCTGTATGTCGGTTGGTTCGGTGTCCTG 188910 ||||| | ||| | ||| ||| | ||||| || || | || ||||| ||||| || Sbjct 6430 TTCTGTAACTGGATAACCAGCACTGAAAACCGCCTTTACATTGGATGGTTTGGTGTTTTG 6371 Query 188911 ATGATCCCTACGCTTCTCG-CTGCAACCATCTGC-TTCATCGTCGCCTTTGTCGCTGCAC 188968 ||||||||||| ||| | | | ||||| |||| || ||| | ||||| | ||||| | Sbjct 6370 ATGATCCCTAC-CTTATTGACCGCAACT-TCTGTATTTATCATAGCCTTCATTGCTGCTC 6313 Query 188969 CCCCTGTAGACATTGATGGCATCCGCGAACCCGTCGCTGGTTCACTCATGTATGGAAACA 189028 | || ||||| |||||||| || || ||||| || |||| || | | || ||||||| Sbjct 6312 CTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTGCTTTACGGAAACA 6253 Query 189029 ACATCATCTCTGGTGCTGTTGTCCCTTCATCCAACGCAATTGGTCTTCACTTCTACCCCA 189088 | || ||||| ||||| || | ||| | || || || ||| | ||||| || || | Sbjct 6252 ATATTATCTCCGGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTATCCAA 6193 Query 189089 TCTGGGAAGCCGCCTCACTCGATGAGTGGCTCTACAACGGTGGTCCTTTCCAACTGGTAG 189148 | |||||||| || || | ||||| ||| | ||||| |||||||||| | || | | Sbjct 6192 TATGGGAAGCGGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTG 6133 Query 189149 TCTTCCACTTCCTCATCGGCATCTACGCCT---ACATGGGTCGTGAGTGGGAACTCTCTT 189205 | | |||||| | | || | || || | |||||||||||||||||||||| || Sbjct 6132 TTCTACACTTCTTACTAGG--TGTA-GCTTGTTACATGGGTCGTGAGTGGGAACTGAGTT 6076 Query 189206 ACCGTCTCGGTATGCGTCCTTGGATCTGCA-TTGCTTACTCTGCACCTGTTGCAGCAGCA 189264 |||||| |||||||| |||||||| ||| |||| || || || ||||||||||| || Sbjct 6075 TCCGTCTGGGTATGCGCCCTTGGAT-TGCTGTTGCGTATTCAGCTCCTGTTGCAGCTGCT 6017 Query 189265 TCCGCAGTCTTTCTGGTCTATCCTTTTGGTCAAGGTTCTTTCTCTGACGCAATGCCCTTG 189324 | || || || || | || || |||||||||| || ||||| | ||||| | Sbjct 6016 ACTGCTGTTTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTA 5957 Query 189325 GGTATCAGTGGAACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATG 189384 || || ||| || ||||||| ||| |||| ||||| || || ||||||||||| ||| Sbjct 5956 GGCATTTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAACACAACATCCTTATG 5897 Query 189385 CACCCCTTCCACATGCTGGGAGTCGCAGGTGTCTTCGGTGGTTCACTGTTCTCCGCAATG 189444 ||||| || |||||| | || || || ||||| || ||||| || || || || ||| Sbjct 5896 CACCCATTTCACATGTTAGGTGTAGCTGGTGTATTTGGTGGCTCCCTATTTAGTGCTATG 5837 Query 189445 CATGGTTCACTCGTTACCTCTTCACTGGTTCGTGAAACCACTGAAACCGAGTCCCAGAAC 189504 |||||||| | || || ||| || | | ||||| || |||| || || || Sbjct 5836 CATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAAT 5777 Query 189505 TATGGTTACAAGTTTGGACAAGAAGAAGAAACGTACAACATCGTTGCTGCTCATGGATAT 189564 | |||||||| || || ||||| |||||||| || || || || ||||||||||| ||| Sbjct 5776 GAAGGTTACAAATTCGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTAT 5717 Query 189565 TTCGGTCGTCTTATCTTCCAATATGCATCGTTCAACAACTCCCGTTCACTTCACTTCTTC 189624 || || || | ||||||||||||||| ||||||||||| ||||| | || |||||| Sbjct 5716 TTTGGCCGATTGATCTTCCAATATGCAAGTTTCAACAACTCTCGTTCTTTACATTTCTTC 5657 Query 189625 CTCGCTGCCTGGCCAGTCGTGGGTATCTGGTTTACCGCCCTCGGCGTCAGCACCATGGCA 189684 | ||||| ||||| || | ||||| |||||||| || | || | || || ||||| Sbjct 5656 TTAGCTGCTTGGCCCGTTATCGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCT 5597 Query 189685 TTCAACCTCAATGGGTTCAACTTCAATCAATCCATTCTTGATGGTCAAGGTCGTGTTCTG 189744 ||||| | ||||| ||||| ||||||||||| | ||||| ||||||||||||| | Sbjct 5596 TTCAATTTAAATGGTTTCAATTTCAATCAATCTGTAGTTGATAGTCAAGGTCGTGTAATT 5537 Query 189745 AACACATGGGCAGACGTTCTCAACCGTGCTGGTCTTGGTATGGAAGTCATGCATGAGCGT 189804 || || || || || | | ||||| ||| |||||||||||||| |||||||| ||| Sbjct 5536 AATACCTGAGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGT 5477 Query 189805 AACGCTCACAACTTCCCTCTTGATCTGGC 189833 || ||||| ||||||||||| || || || Sbjct 5476 AATGCTCATAACTTCCCTCTAGACCTAGC 5448 >seq7678 Length=557 Score = 360 bits (398), Expect = 2e-94 Identities = 339/432 (78%), Gaps = 0/432 (0%) Strand=Plus/Minus Query 189444 GCATGGTTCACTCGTTACCTCTTCACTGGTTCGTGAAACCACTGAAACCGAGTCCCAGAA 189503 ||| ||||| | ||||| || || |||| ||||||||||| |||||||| || || || Sbjct 552 GCACGGTTCCTTGGTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAA 493 Query 189504 CTATGGTTACAAGTTTGGACAAGAAGAAGAAACGTACAACATCGTTGCTGCTCATGGATA 189563 ||| ||||||||||| ||||||||||||||||| ||||||||||| ||||| || || || Sbjct 492 CTACGGTTACAAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTA 433 Query 189564 TTTCGGTCGTCTTATCTTCCAATATGCATCGTTCAACAACTCCCGTTCACTTCACTTCTT 189623 || ||||| | ||||||||||| || || ||||||||| ||||||||| |||||||| Sbjct 432 CTTTGGTCGGTTGATCTTCCAATACGCTTCCTTCAACAACAGCCGTTCACTGCACTTCTT 373 Query 189624 CCTCGCTGCCTGGCCAGTCGTGGGTATCTGGTTTACCGCCCTCGGCGTCAGCACCATGGC 189683 | | ||||| |||||||| | ||||||||||||||||| | || ||||||| ||||| Sbjct 372 CTTGGCTGCATGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAATGGC 313 Query 189684 ATTCAACCTCAATGGGTTCAACTTCAATCAATCCATTCTTGATGGTCAAGGTCGTGTTCT 189743 |||||||| || || ||||||||||| ||||| | | ||| ||||||||| || | Sbjct 312 GTTCAACCTGAACGGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGTCAT 253 Query 189744 GAACACATGGGCAGACGTTCTCAACCGTGCTGGTCTTGGTATGGAAGTCATGCATGAGCG 189803 || ||||| ||||| ||||||| ||| | ||||||||||||||||| ||||| Sbjct 252 CGCTACTTGGGCTGACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGAGCG 193 Query 189804 TAACGCTCACAACTTCCCTCTTGATCTGGCAGCAGCAGAGTCCACTCCTGTGGCACTCAC 189863 |||||||||||||||||| | || |||| || | || |||||||||| | || Sbjct 192 TAACGCTCACAACTTCCCCTTAGACTTGGCTGCTGGTGAAGTTGCTCCTGTGGCTTTAAC 133 Query 189864 CGCTCCCGCAAT 189875 || || ||||| Sbjct 132 TGCACCTGCAAT 121 >seq7307 Length=548 Score = 226 bits (250), Expect = 4e-54 Identities = 337/478 (71%), Gaps = 0/478 (0%) Strand=Plus/Plus Query 190531 TCCACATGATGGGTGTTGCAGGTATCCTGGGAGGAGCACTACTGTCAGCAATCCATGGTG 190590 ||||||||||||| || || ||| | || || ||||| ||| ||| || || || || | Sbjct 1 TCCACATGATGGGAGTAGCGGGTGTACTCGGTGGAGCGCTATTGTGTGCCATTCACGGAG 60 Query 190591 TGACTGTAGAGAATACTTTGTATGAAGATGGTGAACAAGCAAACACGTTTAAAGCATTCG 190650 || ||||| || || || | |||||| |||||| | | || || || || ||| Sbjct 61 CCACAGTAGAAAACACCTTATTTGAAGACGGTGAAGCATCCAAAACCTTCCGCGCCTTCA 120 Query 190651 ACTCTACACAAGAGGAAGAGACCTATTCGATGGTCACTGCCAACCGTTTCTGGTCTCAAA 190710 ||| || |||| ||||| ||||| || ||||| || || ||||| |||||||| || | Sbjct 121 ACTACACCCAAGCAGAAGAAACCTACTCCATGGTGACAGCGAACCGATTCTGGTCACAGA 180 Query 190711 TCTTTGGTGTTGCGTTCAGTAATAAGAGGTGGTTGCATTTCTTTATGCTCTTTGTTCCTG 190770 | || ||| | || ||| || || ||||||| || ||||| ||||| ||||| || | Sbjct 181 TATTCGGTATCGCCTTCTCCAACAAACGGTGGTTACACTTCTTCATGCTGTTTGTACCAG 240 Query 190771 TTATGGGTCTGTGGACTTCTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTT 190830 | | || |||||| | || | || || | ||| | || | ||||| || |||| Sbjct 241 TCACAGGCTTGTGGATGGCGTCAGTAGGAATCGTGGGTTTAGCATTGAACCTCCGGGCTT 300 Query 190831 ATGACTTTGTATCCCAAGAGATCAGAGCAGCAGAAGATCCAGAGTTCGAGACTTTTTACA 190890 | ||||| ||||||||||| | | ||||||||||| ||||| || || || || || | Sbjct 301 ACGACTTCGTATCCCAAGAATTGCGGGCAGCAGAAGACCCAGAATTTGAAACATTCTATA 360 Query 190891 CAAAAAATATACTTTTGAATGAAGGTCTTCGTTCATGGTTGGCACCTGTTGATCAACCCC 190950 | ||||| || | |||| || ||| | || | ||| |||| ||| ||||| || | Sbjct 361 CCAAAAACATTTTGCTGAACGAGGGTATCCGCGCTTGGATGGCTCCTCAAGATCAGCCTC 420 Query 190951 ATGAGAATTTTGTATTTCCAGAAGAAGTATTGCCAAGAGGCAACGCTCTGTGATATAC 191008 | || | |||||||| ||||| || || | || | || |||||||| | ||| || Sbjct 421 ACGAACAATTTGTATTCCCAGAGGAGGTTCTACCTCGTGGTAACGCTCTCTAATAGAC 478 >seq7318 Length=447 Score = 221 bits (244), Expect = 2e-52 Identities = 255/341 (75%), Gaps = 2/341 (1%) Strand=Plus/Plus Query 190368 AATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTGTTAGCGTCTTTCTCATCTACCCT 190427 ||||| || || || |||||||| || |||||||||||| || ||||| || || || Sbjct 1 AATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTTCTAATTTATCCA 60 Query 190428 CTGGGTCAATCGAGTTGGTTCTTCGCGCCATCCTTCGGTGTGGCAGCGATCTTCCGCTTC 190487 |||||||| | ||||||| || ||||| || ||||| ||||| || || |||||| Sbjct 61 CTGGGTCAGGCTGGTTGGTTTTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGCTTC 120 Query 190488 CTCCTCTTCTTGCAGGGCTTCCATAACTGGACGCTGAACCCCTTCCACATGATGGGTGTT 190547 |||| || || || || || ||||| ||||| ||||||| || || |||||||| ||| Sbjct 121 ATCCTATTTTTTCAAGGGTTTCATAATTGGACCTTGAACCCATTTCATATGATGGGAGTT 180 Query 190548 GCAGGTATCCTGGGAGGAGCACTACTGTCAGCAATCCATGGTGTGACTGTAGAGAATACT 190607 || ||| | |||| | || || || | || || ||||||| ||| ||||| |||||| Sbjct 181 GCCGGTGTATTGGGCGCCGCCCTGCTATGCGCTATTCATGGTGCGACGGTAGAAAATACT 240 Query 190608 TTGTATGAAGATGGTGAACAAGCAAACACGTTTAAAGCATTCGACTCTACACAAGAGGAA 190667 || | |||||||||||| ||||| || || || || || | || |||| ||| Sbjct 241 TTATTTGAAGATGGTGATGGTGCAAATACATTCCGGGCTTTTAACCCAACTCAAGCTGAA 300 Query 190668 GAGACCTATTCGATGGTCACTGCCAACCG-TTTCTGGTCTC 190707 || || ||||| ||||||||||| ||||| ||||| ||||| Sbjct 301 GAAACTTATTCAATGGTCACTGCTAACCGCTTTCT-GTCTC 340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634009308006000