Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq9492 190 4e-46 seq9490 190 4e-46 seq9489 190 4e-46 seq7410 149 1e-33 >seq9492 Length=3813 Score = 190 bits (210), Expect = 4e-46 Identities = 253/342 (74%), Gaps = 17/342 (5%) Strand=Plus/Plus Query 1 TAGCCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCC 60 || |||| | ||||| ||||||||| |||||| ||| | |||||||| | || |||||| Sbjct 1004 TACCCCGGG-AGGGGAGTGAAATAGTACCTGAAACCGTGTGCCTACAATCCGTTGGAGCC 1062 Query 61 GAGT--GATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCA 118 | | | |||||| |||||||||||| | ||||||||| ||||||||| ||| Sbjct 1063 TCCTTGGCTGGGGTGACAGCGTGCCTTTTGAAGAATGAGCCTGCGAGTTAGTGCTCAGTG 1122 Query 119 GCGAGGTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACG 178 |||||||||| | | || | ||||| || ||||||||| | ||||||||| | Sbjct 1123 GCGAGGTTAACC-CGTGTGG---GGAAGCCGTAGCGAAAGCGAGTCCGAACAGGGCGCCC 1178 Query 179 A--GTTGGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGC- 235 | || | ||| |||||| |||| | |||||||| ||| | ||||||||||| ||| Sbjct 1179 ATAGTCGCTGGGTCTAGACCCGAAGCGAAGTGATCTAGCCATGGGCAGGTTGAAG-CGCG 1237 Query 236 GGTAA---CGCGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCG 292 ||||| |||| |||||||||||||| | |||||||| | ||||||| | Sbjct 1238 GGTAAGACCGCG---TGGAGGACCGAACCCACCAGGGTTGAAAACCTGGGGGATGACCTG 1294 Query 293 CGGGTAGGGGTGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 || |||||||||||||||||||||||| | |||||| || Sbjct 1295 TGGTTAGGGGTGAAAGGCCAATCAAACTTCGTGATAGCTGGT 1336 >seq9490 Length=3813 Score = 190 bits (210), Expect = 4e-46 Identities = 253/342 (74%), Gaps = 17/342 (5%) Strand=Plus/Minus Query 1 TAGCCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCC 60 || |||| | ||||| ||||||||| |||||| ||| | |||||||| | || |||||| Sbjct 2809 TACCCCGGG-AGGGGAGTGAAATAGTACCTGAAACCGTGTGCCTACAATCCGTTGGAGCC 2751 Query 61 GAGT--GATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCA 118 | | | |||||| |||||||||||| | ||||||||| ||||||||| ||| Sbjct 2750 TCCTTGGCTGGGGTGACAGCGTGCCTTTTGAAGAATGAGCCTGCGAGTTAGTGCTCAGTG 2691 Query 119 GCGAGGTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACG 178 |||||||||| | | || | ||||| || ||||||||| | ||||||||| | Sbjct 2690 GCGAGGTTAACC-CGTGTGG---GGAAGCCGTAGCGAAAGCGAGTCCGAACAGGGCGCCC 2635 Query 179 A--GTTGGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCG 236 | || | ||| |||||| |||| | |||||||| ||| | ||||||||||| |||| Sbjct 2634 ATAGTCGCTGGGTCTAGACCCGAAGCGAAGTGATCTAGCCATGGGCAGGTTGAAG-CGCG 2576 Query 237 G-TAA---CGCGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCG 292 | ||| |||||| |||||||||||| | |||||||| | ||||||| | Sbjct 2575 GGTAAGACCGCGTG---GAGGACCGAACCCACCAGGGTTGAAAACCTGGGGGATGACCTG 2519 Query 293 CGGGTAGGGGTGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 || |||||||||||||||||||||||| | |||||| || Sbjct 2518 TGGTTAGGGGTGAAAGGCCAATCAAACTTCGTGATAGCTGGT 2477 >seq9489 Length=379987 Score = 190 bits (210), Expect = 4e-46 Identities = 253/342 (74%), Gaps = 17/342 (5%) Strand=Plus/Plus Query 1 TAGCCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCC 60 || |||| | ||||| ||||||||| |||||| ||| | |||||||| | || |||||| Sbjct 1004 TACCCCGGG-AGGGGAGTGAAATAGTACCTGAAACCGTGTGCCTACAATCCGTTGGAGCC 1062 Query 61 GAGT--GATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCA 118 | | | |||||| |||||||||||| | ||||||||| ||||||||| ||| Sbjct 1063 TCCTTGGCTGGGGTGACAGCGTGCCTTTTGAAGAATGAGCCTGCGAGTTAGTGCTCAGTG 1122 Query 119 GCGAGGTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACG 178 |||||||||| | | || | ||||| || ||||||||| | ||||||||| | Sbjct 1123 GCGAGGTTAACC-CGTGTGG---GGAAGCCGTAGCGAAAGCGAGTCCGAACAGGGCGCCC 1178 Query 179 A--GTTGGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGC- 235 | || | ||| |||||| |||| | |||||||| ||| | ||||||||||| ||| Sbjct 1179 ATAGTCGCTGGGTCTAGACCCGAAGCGAAGTGATCTAGCCATGGGCAGGTTGAAG-CGCG 1237 Query 236 GGTAA---CGCGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCG 292 ||||| |||| |||||||||||||| | |||||||| | ||||||| | Sbjct 1238 GGTAAGACCGCG---TGGAGGACCGAACCCACCAGGGTTGAAAACCTGGGGGATGACCTG 1294 Query 293 CGGGTAGGGGTGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 || |||||||||||||||||||||||| | |||||| || Sbjct 1295 TGGTTAGGGGTGAAAGGCCAATCAAACTTCGTGATAGCTGGT 1336 >seq7410 Length=428 Score = 149 bits (164), Expect = 1e-33 Identities = 200/269 (74%), Gaps = 17/269 (6%) Strand=Plus/Plus Query 1 TAGCCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCC 60 || |||| | ||||| ||||||||| |||||| ||| | |||||||| | || |||||| Sbjct 95 TACCCCGGG-AGGGGAGTGAAATAGTACCTGAAACCGTGTGCCTACAATCCGTTGGAGCC 153 Query 61 G--AGTGATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCA 118 | | | |||||| |||||||||||| | ||||||||| ||||||||| ||| Sbjct 154 TCCATGGCTGGGGTGACAGCGTGCCTTTTGAAGAATGAGCCTGCGAGTTAGTGCTCAGTG 213 Query 119 GCGAGGTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGAC- 177 |||||||||| | | || | ||||| || ||||||||| | ||||||||| | Sbjct 214 GCGAGGTTAA-CCCGTGTGG---GGAAGCCGTAGCGAAAGCGAGTCCGAACAGGGCGTCC 269 Query 178 -GAGTTGGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGC- 235 ||| | ||| |||||| |||| | |||||||| ||| | ||||||||||| ||| Sbjct 270 ATAGTCGCTGGGTCTAGACCCGAAGCGAAGTGATCTAGCCATGGGCAGGTTGAAG-CGCG 328 Query 236 GGTAA---CGCGTGATGGAGGACCGAACC 261 ||||| |||| |||||||||||||| Sbjct 329 GGTAAGACCGCG---TGGAGGACCGAACC 354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972707661824