Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= AAMG01000140.1
Length=336
Score E
Sequences producing significant alignments: (Bits) Value
seq9492 190 4e-46
seq9490 190 4e-46
seq9489 190 4e-46
seq7410 149 1e-33
>seq9492
Length=3813
Score = 190 bits (210), Expect = 4e-46
Identities = 253/342 (74%), Gaps = 17/342 (5%)
Strand=Plus/Plus
Query 1 TAGCCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCC 60
|| |||| | ||||| ||||||||| |||||| ||| | |||||||| | || ||||||
Sbjct 1004 TACCCCGGG-AGGGGAGTGAAATAGTACCTGAAACCGTGTGCCTACAATCCGTTGGAGCC 1062
Query 61 GAGT--GATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCA 118
| | | |||||| |||||||||||| | ||||||||| ||||||||| |||
Sbjct 1063 TCCTTGGCTGGGGTGACAGCGTGCCTTTTGAAGAATGAGCCTGCGAGTTAGTGCTCAGTG 1122
Query 119 GCGAGGTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACG 178
|||||||||| | | || | ||||| || ||||||||| | ||||||||| |
Sbjct 1123 GCGAGGTTAACC-CGTGTGG---GGAAGCCGTAGCGAAAGCGAGTCCGAACAGGGCGCCC 1178
Query 179 A--GTTGGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGC- 235
| || | ||| |||||| |||| | |||||||| ||| | ||||||||||| |||
Sbjct 1179 ATAGTCGCTGGGTCTAGACCCGAAGCGAAGTGATCTAGCCATGGGCAGGTTGAAG-CGCG 1237
Query 236 GGTAA---CGCGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCG 292
||||| |||| |||||||||||||| | |||||||| | ||||||| |
Sbjct 1238 GGTAAGACCGCG---TGGAGGACCGAACCCACCAGGGTTGAAAACCTGGGGGATGACCTG 1294
Query 293 CGGGTAGGGGTGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334
|| |||||||||||||||||||||||| | |||||| ||
Sbjct 1295 TGGTTAGGGGTGAAAGGCCAATCAAACTTCGTGATAGCTGGT 1336
>seq9490
Length=3813
Score = 190 bits (210), Expect = 4e-46
Identities = 253/342 (74%), Gaps = 17/342 (5%)
Strand=Plus/Minus
Query 1 TAGCCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCC 60
|| |||| | ||||| ||||||||| |||||| ||| | |||||||| | || ||||||
Sbjct 2809 TACCCCGGG-AGGGGAGTGAAATAGTACCTGAAACCGTGTGCCTACAATCCGTTGGAGCC 2751
Query 61 GAGT--GATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCA 118
| | | |||||| |||||||||||| | ||||||||| ||||||||| |||
Sbjct 2750 TCCTTGGCTGGGGTGACAGCGTGCCTTTTGAAGAATGAGCCTGCGAGTTAGTGCTCAGTG 2691
Query 119 GCGAGGTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACG 178
|||||||||| | | || | ||||| || ||||||||| | ||||||||| |
Sbjct 2690 GCGAGGTTAACC-CGTGTGG---GGAAGCCGTAGCGAAAGCGAGTCCGAACAGGGCGCCC 2635
Query 179 A--GTTGGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCG 236
| || | ||| |||||| |||| | |||||||| ||| | ||||||||||| ||||
Sbjct 2634 ATAGTCGCTGGGTCTAGACCCGAAGCGAAGTGATCTAGCCATGGGCAGGTTGAAG-CGCG 2576
Query 237 G-TAA---CGCGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCG 292
| ||| |||||| |||||||||||| | |||||||| | ||||||| |
Sbjct 2575 GGTAAGACCGCGTG---GAGGACCGAACCCACCAGGGTTGAAAACCTGGGGGATGACCTG 2519
Query 293 CGGGTAGGGGTGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334
|| |||||||||||||||||||||||| | |||||| ||
Sbjct 2518 TGGTTAGGGGTGAAAGGCCAATCAAACTTCGTGATAGCTGGT 2477
>seq9489
Length=379987
Score = 190 bits (210), Expect = 4e-46
Identities = 253/342 (74%), Gaps = 17/342 (5%)
Strand=Plus/Plus
Query 1 TAGCCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCC 60
|| |||| | ||||| ||||||||| |||||| ||| | |||||||| | || ||||||
Sbjct 1004 TACCCCGGG-AGGGGAGTGAAATAGTACCTGAAACCGTGTGCCTACAATCCGTTGGAGCC 1062
Query 61 GAGT--GATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCA 118
| | | |||||| |||||||||||| | ||||||||| ||||||||| |||
Sbjct 1063 TCCTTGGCTGGGGTGACAGCGTGCCTTTTGAAGAATGAGCCTGCGAGTTAGTGCTCAGTG 1122
Query 119 GCGAGGTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACG 178
|||||||||| | | || | ||||| || ||||||||| | ||||||||| |
Sbjct 1123 GCGAGGTTAACC-CGTGTGG---GGAAGCCGTAGCGAAAGCGAGTCCGAACAGGGCGCCC 1178
Query 179 A--GTTGGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGC- 235
| || | ||| |||||| |||| | |||||||| ||| | ||||||||||| |||
Sbjct 1179 ATAGTCGCTGGGTCTAGACCCGAAGCGAAGTGATCTAGCCATGGGCAGGTTGAAG-CGCG 1237
Query 236 GGTAA---CGCGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCG 292
||||| |||| |||||||||||||| | |||||||| | ||||||| |
Sbjct 1238 GGTAAGACCGCG---TGGAGGACCGAACCCACCAGGGTTGAAAACCTGGGGGATGACCTG 1294
Query 293 CGGGTAGGGGTGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334
|| |||||||||||||||||||||||| | |||||| ||
Sbjct 1295 TGGTTAGGGGTGAAAGGCCAATCAAACTTCGTGATAGCTGGT 1336
>seq7410
Length=428
Score = 149 bits (164), Expect = 1e-33
Identities = 200/269 (74%), Gaps = 17/269 (6%)
Strand=Plus/Plus
Query 1 TAGCCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCC 60
|| |||| | ||||| ||||||||| |||||| ||| | |||||||| | || ||||||
Sbjct 95 TACCCCGGG-AGGGGAGTGAAATAGTACCTGAAACCGTGTGCCTACAATCCGTTGGAGCC 153
Query 61 G--AGTGATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCA 118
| | | |||||| |||||||||||| | ||||||||| ||||||||| |||
Sbjct 154 TCCATGGCTGGGGTGACAGCGTGCCTTTTGAAGAATGAGCCTGCGAGTTAGTGCTCAGTG 213
Query 119 GCGAGGTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGAC- 177
|||||||||| | | || | ||||| || ||||||||| | ||||||||| |
Sbjct 214 GCGAGGTTAA-CCCGTGTGG---GGAAGCCGTAGCGAAAGCGAGTCCGAACAGGGCGTCC 269
Query 178 -GAGTTGGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGC- 235
||| | ||| |||||| |||| | |||||||| ||| | ||||||||||| |||
Sbjct 270 ATAGTCGCTGGGTCTAGACCCGAAGCGAAGTGATCTAGCCATGGGCAGGTTGAAG-CGCG 328
Query 236 GGTAA---CGCGTGATGGAGGACCGAACC 261
||||| |||| ||||||||||||||
Sbjct 329 GGTAAGACCGCG---TGGAGGACCGAACC 354
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 972707661824
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |