Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq9492 257 2e-66 seq9490 257 2e-66 seq9489 257 2e-66 >seq9492 Length=3813 Score = 257 bits (284), Expect = 2e-66 Identities = 211/252 (84%), Gaps = 6/252 (2%) Strand=Plus/Minus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| ||||||| |||||||||||||||||||||||||||||| ||| | | |||||||| Sbjct 2503 CTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCGTCTTGC-GACTTCGCAC 2445 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCA-CCACCAGCTC 119 |||||||||||||||||||||||||||||| | || |||||||| || |||| | | Sbjct 2444 GGACCTGTGTTTTTAGTAAACAGTCGCTTCTCCCTGGTCTCTGCGGCCGTCCACGCTCCC 2385 Query 120 AACACGTCG---TTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGC 176 | | || | ||||| | ||| ||||||||||||||||||||||| |||||||| Sbjct 2384 ACCGCGAGGGTGTTCACGCTTCG-GGCCCCCCTTCTCCCGAAGTTACGGGGGCATTTTGC 2326 Query 177 CGAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGT 236 ||| |||||||||||| ||| | ||| ||||||||||||||||||||||||||||| || Sbjct 2325 CGAGTTCCTTAACCACGATTCTCTCGATCGCCTTAGTATTCTCTACCTGACCACCTGAGT 2266 Query 237 CGGTTTACGGTA 248 |||||| |||| Sbjct 2265 CGGTTTGGGGTA 2254 >seq9490 Length=3813 Score = 257 bits (284), Expect = 2e-66 Identities = 211/252 (84%), Gaps = 6/252 (2%) Strand=Plus/Plus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| ||||||| |||||||||||||||||||||||||||||| ||| | | |||||||| Sbjct 1310 CTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCGTCTTGC-GACTTCGCAC 1368 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCA-CCACCAGCTC 119 |||||||||||||||||||||||||||||| | || |||||||| || |||| | | Sbjct 1369 GGACCTGTGTTTTTAGTAAACAGTCGCTTCTCCCTGGTCTCTGCGGCCGTCCACGCTCCC 1428 Query 120 AACACGTCG---TTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGC 176 | | || | ||||| | ||| ||||||||||||||||||||||| |||||||| Sbjct 1429 ACCGCGAGGGTGTTCACGCTTCG-GGCCCCCCTTCTCCCGAAGTTACGGGGGCATTTTGC 1487 Query 177 CGAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGT 236 ||| |||||||||||| ||| | ||| ||||||||||||||||||||||||||||| || Sbjct 1488 CGAGTTCCTTAACCACGATTCTCTCGATCGCCTTAGTATTCTCTACCTGACCACCTGAGT 1547 Query 237 CGGTTTACGGTA 248 |||||| |||| Sbjct 1548 CGGTTTGGGGTA 1559 >seq9489 Length=379987 Score = 257 bits (284), Expect = 2e-66 Identities = 211/252 (84%), Gaps = 6/252 (2%) Strand=Plus/Minus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| ||||||| |||||||||||||||||||||||||||||| ||| | | |||||||| Sbjct 2503 CTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCGTCTTGC-GACTTCGCAC 2445 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCA-CCACCAGCTC 119 |||||||||||||||||||||||||||||| | || |||||||| || |||| | | Sbjct 2444 GGACCTGTGTTTTTAGTAAACAGTCGCTTCTCCCTGGTCTCTGCGGCCGTCCACGCTCCC 2385 Query 120 AACACGTCG---TTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGC 176 | | || | ||||| | ||| ||||||||||||||||||||||| |||||||| Sbjct 2384 ACCGCGAGGGTGTTCACGCTTCG-GGCCCCCCTTCTCCCGAAGTTACGGGGGCATTTTGC 2326 Query 177 CGAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGT 236 ||| |||||||||||| ||| | ||| ||||||||||||||||||||||||||||| || Sbjct 2325 CGAGTTCCTTAACCACGATTCTCTCGATCGCCTTAGTATTCTCTACCTGACCACCTGAGT 2266 Query 237 CGGTTTACGGTA 248 |||||| |||| Sbjct 2265 CGGTTTGGGGTA 2254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694336147316