Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq9492 93.3 4e-17 seq9490 93.3 4e-17 seq9489 93.3 4e-17 >seq9492 Length=3813 Score = 93.3 bits (102), Expect = 4e-17 Identities = 80/99 (81%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| ||| || || ||| ||| || ||||||||||| | ||| ||||| ||||||| Sbjct 2259 CAAACCGACTCAGGTGGTCAGGTAGAGAATACTAAGGCGATCGAGAGAATCGTGGTTAAG 2318 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGG 122 ||||| |||||| || ||| |||||||||||| || ||| Sbjct 2319 GAACTCGGCAAAATGCCCCCGTAACTTCGGGAGAAGGGG 2357 >seq9490 Length=3813 Score = 93.3 bits (102), Expect = 4e-17 Identities = 80/99 (81%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| ||| || || ||| ||| || ||||||||||| | ||| ||||| ||||||| Sbjct 1554 CAAACCGACTCAGGTGGTCAGGTAGAGAATACTAAGGCGATCGAGAGAATCGTGGTTAAG 1495 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGG 122 ||||| |||||| || ||| |||||||||||| || ||| Sbjct 1494 GAACTCGGCAAAATGCCCCCGTAACTTCGGGAGAAGGGG 1456 >seq9489 Length=379987 Score = 93.3 bits (102), Expect = 4e-17 Identities = 80/99 (81%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| ||| || || ||| ||| || ||||||||||| | ||| ||||| ||||||| Sbjct 2259 CAAACCGACTCAGGTGGTCAGGTAGAGAATACTAAGGCGATCGAGAGAATCGTGGTTAAG 2318 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGG 122 ||||| |||||| || ||| |||||||||||| || ||| Sbjct 2319 GAACTCGGCAAAATGCCCCCGTAACTTCGGGAGAAGGGG 2357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531151154168