Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq9492 89.7 5e-16 seq9490 89.7 5e-16 seq9489 89.7 5e-16 >seq9492 Length=3813 Score = 89.7 bits (98), Expect = 5e-16 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 46 CGGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACG 105 ||| || ||| |||||| | ||||||||||| ||||||||||| | ||| || || Sbjct 2396 CGGCCGCAGAGACCAGGGAGAAGCGACTGTTTACTAAAAACACAGGTCCGTGCGAAGTCG 2455 Query 106 AAAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| || ||||| || ||||||||||||||||| |||||||||| Sbjct 2456 CAAGACGATGTATACGGACTGACGCCTGCCCGGTGCTGGAAGGTTAA 2502 >seq9490 Length=3813 Score = 89.7 bits (98), Expect = 5e-16 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 46 CGGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACG 105 ||| || ||| |||||| | ||||||||||| ||||||||||| | ||| || || Sbjct 1417 CGGCCGCAGAGACCAGGGAGAAGCGACTGTTTACTAAAAACACAGGTCCGTGCGAAGTCG 1358 Query 106 AAAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| || ||||| || ||||||||||||||||| |||||||||| Sbjct 1357 CAAGACGATGTATACGGACTGACGCCTGCCCGGTGCTGGAAGGTTAA 1311 >seq9489 Length=379987 Score = 89.7 bits (98), Expect = 5e-16 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 46 CGGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACG 105 ||| || ||| |||||| | ||||||||||| ||||||||||| | ||| || || Sbjct 2396 CGGCCGCAGAGACCAGGGAGAAGCGACTGTTTACTAAAAACACAGGTCCGTGCGAAGTCG 2455 Query 106 AAAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| || ||||| || ||||||||||||||||| |||||||||| Sbjct 2456 CAAGACGATGTATACGGACTGACGCCTGCCCGGTGCTGGAAGGTTAA 2502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476756156452