Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq124 325 6e-87
seq4397 107 3e-21
seq7147 84.2 3e-14
>seq124
Length=51484
Score = 325 bits (360), Expect = 6e-87
Identities = 230/260 (88%), Gaps = 6/260 (2%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 225 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 284
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC---A 118
|||||||||||||||||||||||| |||| ||| || ||||||||||||||||| |
Sbjct 285 CCTGTTATTGCCTCAAACTTCCATCGGCTTGAAACCGATAGTCCCTCTAAGAAGTGGATA 344
Query 119 GCCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178
||| ||| || | | |||||||| |||||||||||||||||||||||| |||
Sbjct 345 ACCAGCAA--ATGCTAGCACCA-CTATTTAGTAGGTTAAGGTCTCGTTCGTTATCGCAAT 401
Query 179 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 238
||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct 402 TAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAA 461
Query 239 GAAAGAGCTATCAATCTGTC 258
||||||||| ||||||||||
Sbjct 462 GAAAGAGCTCTCAATCTGTC 481
>seq4397
Length=459
Score = 107 bits (118), Expect = 3e-21
Identities = 92/114 (81%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
|||| | ||||||||||| || | | | ||| |||| ||| || |||||||||||| |
Sbjct 335 ACTCTCTTGCTCCGTCAGTTTATCTCTCTGGCGTCCCACAACCTCGAAGGGCATCACACA 394
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115
||||||| |||||||||||| | | |||| ||| || |||||||||| ||||||
Sbjct 395 CCTGTTAGTGCCTCAAACTTGCGTAGGCTTGAAACCTATAGTCCCTCGAAGAAG 448
>seq7147
Length=430
Score = 84.2 bits (92), Expect = 3e-14
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
|||||||| | ||||| ||||||||| ||||| |||||| |||||||||||||||||||
Sbjct 22 CTATTTAGTACGTTAACGTCTCGTTCATTATCTCAATTAAGCAGACAAATCACTCCACCA 81
Query 202 ACTAAGAACGGCCA 215
| || |||||||
Sbjct 82 GCCAACGACGGCCA 95
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796726731252
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |