Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq124 325 6e-87 seq4397 107 3e-21 seq7147 84.2 3e-14 >seq124 Length=51484 Score = 325 bits (360), Expect = 6e-87 Identities = 230/260 (88%), Gaps = 6/260 (2%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 225 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 284 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC---A 118 |||||||||||||||||||||||| |||| ||| || ||||||||||||||||| | Sbjct 285 CCTGTTATTGCCTCAAACTTCCATCGGCTTGAAACCGATAGTCCCTCTAAGAAGTGGATA 344 Query 119 GCCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178 ||| ||| || | | |||||||| |||||||||||||||||||||||| ||| Sbjct 345 ACCAGCAA--ATGCTAGCACCA-CTATTTAGTAGGTTAAGGTCTCGTTCGTTATCGCAAT 401 Query 179 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 238 ||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct 402 TAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAA 461 Query 239 GAAAGAGCTATCAATCTGTC 258 ||||||||| |||||||||| Sbjct 462 GAAAGAGCTCTCAATCTGTC 481 >seq4397 Length=459 Score = 107 bits (118), Expect = 3e-21 Identities = 92/114 (81%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 |||| | ||||||||||| || | | | ||| |||| ||| || |||||||||||| | Sbjct 335 ACTCTCTTGCTCCGTCAGTTTATCTCTCTGGCGTCCCACAACCTCGAAGGGCATCACACA 394 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 ||||||| |||||||||||| | | |||| ||| || |||||||||| |||||| Sbjct 395 CCTGTTAGTGCCTCAAACTTGCGTAGGCTTGAAACCTATAGTCCCTCGAAGAAG 448 >seq7147 Length=430 Score = 84.2 bits (92), Expect = 3e-14 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 |||||||| | ||||| ||||||||| ||||| |||||| ||||||||||||||||||| Sbjct 22 CTATTTAGTACGTTAACGTCTCGTTCATTATCTCAATTAAGCAGACAAATCACTCCACCA 81 Query 202 ACTAAGAACGGCCA 215 | || ||||||| Sbjct 82 GCCAACGACGGCCA 95 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796726731252