Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= AAMG01001182.1 Length=261 Score E Sequences producing significant alignments: (Bits) Value seq18 80.6 4e-13 seq1 73.4 6e-11 >seq18 Length=237046 Score = 80.6 bits (88), Expect = 4e-13 Identities = 130/187 (70%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 51 GTCCAGGCCCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCA 110 ||| ||| ||| |||||||| || | ||||||||||||||||| |||| |||||| Sbjct 33222 GTCGAGGTTCGGCGCCGGCGCGATCTCGATGACCTTCTGGTGACGACGCTGCAACGAGCA 33281 Query 111 ATCGCGGTCGCCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCAC 170 || || ||| |||||| | | ||| ||| |||||| | ||| | ||||| || | Sbjct 33282 GTCCCGCTCGTACAGGTGCACGACGTTCCCCGCGCCGTCCGCCAGGATCTGCACCTCGAT 33341 Query 171 GTGACGTGGGTTGGTCAGGTACTTTTCCAGGTAGACCATCGGGTTGCCGAACCAGGCGCC 230 ||| || || || || |||||| | ||| |||||| |||||| | || | Sbjct 33342 GTGCCGCGGCCGCAGCACCGCCTGCTCCAGGAACACCGTCGGGTCGCCGAATGCGCCGTC 33401 Query 231 CGCTTCG 237 ||| ||| Sbjct 33402 CGCCTCG 33408 >seq1 Length=1297082 Score = 73.4 bits (80), Expect = 6e-11 Identities = 88/120 (73%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 60 CGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCGGTC 119 ||| | |||||| || || | ||||||||||| || || || |||||||| ||||| || Sbjct 752584 CGGCGACGGCGCCTCCTCGACCACCTTCTGGTGGCGGCGCTGGAGCGAGCACTCGCGCTC 752643 Query 120 GCCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTGACGTGG 179 ||||||||||| || || || ||||| || || ||||| || | ||| || || Sbjct 752644 GCCCAGGTGGACCACGGTCCCGTGCGTGTCGGCGAGCACCTGCACCTCGATGTGGCGCGG 752703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 735932322040