Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq9492 740 0.0 seq9490 740 0.0 seq9489 740 0.0 seq7410 381 2e-103 seq2726 109 2e-21 >seq9492 Length=3813 Score = 740 bits (820), Expect = 0.0 Identities = 528/601 (88%), Gaps = 14/601 (2%) Strand=Plus/Minus Query 1 TCGACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCG 60 |||||||||||||||| |||||||||||||||| ||| |||| |||||| |||||||||| Sbjct 1499 TCGACTACGGAGCTTA-TCCCCCGCAGTCTCACTGCCACGCTTTCACTTACCGGCATTCG 1441 Query 61 GAGTTTGGTTGATTTCGGTAAGCTTGTGGGCCCCCTAGACCATCCAGT-GCTCTACCTCC 119 |||||||| ||| || |||| ||||| || ||| | | ||||||||| ||||||||||| Sbjct 1440 GAGTTTGGCTGACGTCAGTAACCTTGTAGGGCCCATCGGCCATCCAGTAGCTCTACCTCC 1381 Query 120 GGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAG 179 || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1380 GGCAAGAAACACGTGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAG 1321 Query 180 TTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGT 239 |||||||||||||||||||||| ||||||||||||||| |||||||||| |||||| Sbjct 1320 TTTGATTGGCCTTTCACCCCTAACCACAGGTCATCCCCCAGGTTTTCAACCCTGGTGGGT 1261 Query 240 TCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTT 299 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1260 TCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGCTAGATCACTTCGCTT 1201 Query 300 CGGGTCTTGATCGTGCCACTCAT--ACGCCCTATTCGGACTCGCTTTCGCTACGGCTACC 357 ||||||| || | || ||| || |||||| |||||||||||||||||||||||| || Sbjct 1200 CGGGTCTAGACCCAGCGACT-ATGGGCGCCCTGTTCGGACTCGCTTTCGCTACGGCTTCC 1142 Query 358 CCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACG 417 ||||||||||||||||||| || | | | |||||||||||||||||||||||||||||| Sbjct 1141 CCACACGGGTTAACCTCGCCACTGAGCACTAACTCGCAGGCTCATTCTTCAAAAGGCACG 1082 Query 418 CCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAG 477 | |||||| || || || ||||| |||||||||||||||| |||||||| Sbjct 1081 CTGTCACC-----CC----AGCCAAGGAGGCTCCAACGGATTGTAGGCACACGGTTTCAG 1031 Query 478 GTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCT 537 ||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||| Sbjct 1030 GTACTATTTCACTCCCCTCCCGGGGTACTTTTCACCTTTCCCTCACGGTACTGGTCCGCT 971 Query 538 ATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTT 597 ||||||||| | | |||||||||||||| | |||||| ||||||||||||||| |||| Sbjct 970 ATCGGTCACTAGGTAGTATTTAGGCTTAGCAAGTGGTCTTGCCAGATTCACACGAGATTT 911 Query 598 C 598 | Sbjct 910 C 910 >seq9490 Length=3813 Score = 740 bits (820), Expect = 0.0 Identities = 528/601 (88%), Gaps = 14/601 (2%) Strand=Plus/Plus Query 1 TCGACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCG 60 |||||||||||||||| |||||||||||||||| ||| |||| |||||| |||||||||| Sbjct 2314 TCGACTACGGAGCTTA-TCCCCCGCAGTCTCACTGCCACGCTTTCACTTACCGGCATTCG 2372 Query 61 GAGTTTGGTTGATTTCGGTAAGCTTGTGGGCCCCCTAGACCATCCAGT-GCTCTACCTCC 119 |||||||| ||| || |||| ||||| || ||| | | ||||||||| ||||||||||| Sbjct 2373 GAGTTTGGCTGACGTCAGTAACCTTGTAGGGCCCATCGGCCATCCAGTAGCTCTACCTCC 2432 Query 120 GGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAG 179 || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2433 GGCAAGAAACACGTGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAG 2492 Query 180 TTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGT 239 |||||||||||||||||||||| ||||||||||||||| |||||||||| |||||| Sbjct 2493 TTTGATTGGCCTTTCACCCCTAACCACAGGTCATCCCCCAGGTTTTCAACCCTGGTGGGT 2552 Query 240 TCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTT 299 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 2553 TCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGCTAGATCACTTCGCTT 2612 Query 300 CGGGTCTTGATCGTGCCACTCAT--ACGCCCTATTCGGACTCGCTTTCGCTACGGCTACC 357 ||||||| || | || ||| || |||||| |||||||||||||||||||||||| || Sbjct 2613 CGGGTCTAGACCCAGCGACT-ATGGGCGCCCTGTTCGGACTCGCTTTCGCTACGGCTTCC 2671 Query 358 CCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACG 417 ||||||||||||||||||| || | | | |||||||||||||||||||||||||||||| Sbjct 2672 CCACACGGGTTAACCTCGCCACTGAGCACTAACTCGCAGGCTCATTCTTCAAAAGGCACG 2731 Query 418 CCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAG 477 | |||||| || || || ||||| |||||||||||||||| |||||||| Sbjct 2732 CTGTCACC-----CC----AGCCAAGGAGGCTCCAACGGATTGTAGGCACACGGTTTCAG 2782 Query 478 GTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCT 537 ||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||| Sbjct 2783 GTACTATTTCACTCCCCTCCCGGGGTACTTTTCACCTTTCCCTCACGGTACTGGTCCGCT 2842 Query 538 ATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTT 597 ||||||||| | | |||||||||||||| | |||||| ||||||||||||||| |||| Sbjct 2843 ATCGGTCACTAGGTAGTATTTAGGCTTAGCAAGTGGTCTTGCCAGATTCACACGAGATTT 2902 Query 598 C 598 | Sbjct 2903 C 2903 >seq9489 Length=379987 Score = 740 bits (820), Expect = 0.0 Identities = 528/601 (88%), Gaps = 14/601 (2%) Strand=Plus/Minus Query 1 TCGACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCG 60 |||||||||||||||| |||||||||||||||| ||| |||| |||||| |||||||||| Sbjct 1499 TCGACTACGGAGCTTA-TCCCCCGCAGTCTCACTGCCACGCTTTCACTTACCGGCATTCG 1441 Query 61 GAGTTTGGTTGATTTCGGTAAGCTTGTGGGCCCCCTAGACCATCCAGT-GCTCTACCTCC 119 |||||||| ||| || |||| ||||| || ||| | | ||||||||| ||||||||||| Sbjct 1440 GAGTTTGGCTGACGTCAGTAACCTTGTAGGGCCCATCGGCCATCCAGTAGCTCTACCTCC 1381 Query 120 GGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAG 179 || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1380 GGCAAGAAACACGTGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAG 1321 Query 180 TTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGT 239 |||||||||||||||||||||| ||||||||||||||| |||||||||| |||||| Sbjct 1320 TTTGATTGGCCTTTCACCCCTAACCACAGGTCATCCCCCAGGTTTTCAACCCTGGTGGGT 1261 Query 240 TCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTT 299 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1260 TCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGCTAGATCACTTCGCTT 1201 Query 300 CGGGTCTTGATCGTGCCACTCAT--ACGCCCTATTCGGACTCGCTTTCGCTACGGCTACC 357 ||||||| || | || ||| || |||||| |||||||||||||||||||||||| || Sbjct 1200 CGGGTCTAGACCCAGCGACT-ATGGGCGCCCTGTTCGGACTCGCTTTCGCTACGGCTTCC 1142 Query 358 CCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACG 417 ||||||||||||||||||| || | | | |||||||||||||||||||||||||||||| Sbjct 1141 CCACACGGGTTAACCTCGCCACTGAGCACTAACTCGCAGGCTCATTCTTCAAAAGGCACG 1082 Query 418 CCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAG 477 | |||||| || || || ||||| |||||||||||||||| |||||||| Sbjct 1081 CTGTCACC-----CC----AGCCAAGGAGGCTCCAACGGATTGTAGGCACACGGTTTCAG 1031 Query 478 GTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCT 537 ||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||| Sbjct 1030 GTACTATTTCACTCCCCTCCCGGGGTACTTTTCACCTTTCCCTCACGGTACTGGTCCGCT 971 Query 538 ATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTT 597 ||||||||| | | |||||||||||||| | |||||| ||||||||||||||| |||| Sbjct 970 ATCGGTCACTAGGTAGTATTTAGGCTTAGCAAGTGGTCTTGCCAGATTCACACGAGATTT 911 Query 598 C 598 | Sbjct 910 C 910 >seq7410 Length=428 Score = 381 bits (422), Expect = 2e-103 Identities = 313/378 (83%), Gaps = 12/378 (3%) Strand=Plus/Minus Query 222 TTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCAT 281 ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 369 TTTGCAACCCGGGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCAT 310 Query 282 GGATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCAT--ACGCCCTATTCGGACTC 339 || |||||||||||||||||||||| || | || ||| || ||||||| ||||||||| Sbjct 309 GGCTAGATCACTTCGCTTCGGGTCTAGACCCAGCGACT-ATGGACGCCCTGTTCGGACTC 251 Query 340 GCTTTCGCTACGGCTACCCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCT 399 ||||||||||||||| ||||||||||||||||||||| || | | | |||||||||||| Sbjct 250 GCTTTCGCTACGGCTTCCCCACACGGGTTAACCTCGCCACTGAGCACTAACTCGCAGGCT 191 Query 400 CATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATT 459 ||||||||||||||||||| |||||| || || || ||||| ||||||| Sbjct 190 CATTCTTCAAAAGGCACGCTGTCACC-----CC----AGCCATGGAGGCTCCAACGGATT 140 Query 460 GTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCC 519 ||||||||| ||||||||||||||||||||||||| || |||||||||||| |||||||| Sbjct 139 GTAGGCACACGGTTTCAGGTACTATTTCACTCCCCTCCCGGGGTACTTTTCCCCTTTCCC 80 Query 520 TCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGC 579 || ||||| |||| | ||||| | | | | | ||||||| |||| | |||||| || Sbjct 79 TCCGCGTACTCGTCCCCCATCGGGCCCTACGTACTATTTAGTCTTAGCCAGTGGTCTTGC 20 Query 580 CAGATTCACACGAAATTT 597 | | ||||| | | |||| Sbjct 19 CCGCTTCACCCCAGATTT 2 >seq2726 Length=525 Score = 109 bits (120), Expect = 2e-21 Identities = 82/94 (87%), Gaps = 2/94 (2%) Strand=Plus/Plus Query 1 TCGACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCG 60 || ||||||||||||| |||||||||||||||| ||| |||| |||||| |||||||||| Sbjct 428 TCCACTACGGAGCTTA-TCCCCCGCAGTCTCACTGCCACGCTTTCACTTACCGGCATTCG 486 Query 61 GAGTTTGGTTGATTTCGGTAAGCTTGT-GGGCCC 93 |||||||| ||| || |||| ||||| |||||| Sbjct 487 GAGTTTGGCTGACGTCAGTAACCTTGTAGGGCCC 520 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817427473408