Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= AAMG01001291.1
Length=420
Score E
Sequences producing significant alignments: (Bits) Value
seq9492 268 2e-69
seq9490 268 2e-69
seq9489 268 2e-69
seq7410 199 1e-48
>seq9492
Length=3813
Score = 268 bits (296), Expect = 2e-69
Identities = 316/414 (76%), Gaps = 13/414 (3%)
Strand=Plus/Minus
Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68
||||||||||| || | | |||||||| | || |||||||||||||| || ||
Sbjct 1297 CCACAGGTCATCCCCC--AGGTTTTCAACCCTGGTGGGTTCGGTCCTCCACGCGGTC-TT 1241
Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128
|||| ||| |||||||||||| || |||||| | | || |||||||| ||||||
Sbjct 1240 ACCCGCGCTT-CAACCTGCCCAT-GGCTAGATCACTTCGCTT-CGGGTCTAGA-CCCAGC 1185
Query 129 GACTA--GACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAGCTT 186
||||| | |||||| | |||||||||| ||||||| || ||| | ||| | | | |
Sbjct 1184 GACTATGGGCGCCCTGTTCGGACTCGCTTT-CGCTACGGCTTCCCCACACGGGTTAACCT 1126
Query 187 TGCCACTGAAAA-TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAA-CAAA 244
|||||||| | ||| |||| | | |||| | ||||||| |||| ||||||| | | ||
Sbjct 1125 CGCCACTGAGCACTAACTCGCAGGCTCATTCTTCAAAAGGCACGCTGTCACCCCAGCCAA 1066
Query 245 GTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGG 304
| |||||| || | ||||| ||| ||||||||||| |||||||||||||||| |||||
Sbjct 1065 GGAGGCTCCAACGGATTGTAGGCACACGGTTTCAGGTACTATTTCACTCCCCTC-CCGGG 1007
Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364
|| |||||| |||||||||||||||||| || | |||||||||| | |||||||||||
Sbjct 1006 GTACTTTTCACCTTTCCCTCACGGTACTGGTCCGCTATCGGTCACTAGGTAGTATTTAGG 947
Query 365 CTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418
||| | ||||| ||| ||||| || | ||||||| || |||| |||||
Sbjct 946 CTTAGCAAGTGGTCTTGCCAGATTCACACGAGATTTCTCGGGCCCCGTGCTACT 893
>seq9490
Length=3813
Score = 268 bits (296), Expect = 2e-69
Identities = 316/414 (76%), Gaps = 13/414 (3%)
Strand=Plus/Plus
Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68
||||||||||| || | | |||||||| | || |||||||||||||| || ||
Sbjct 2516 CCACAGGTCATCCCCC--AGGTTTTCAACCCTGGTGGGTTCGGTCCTCCACGCGGTC-TT 2572
Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128
|||| ||| |||||||||||| || |||||| | | || |||||||| ||||||
Sbjct 2573 ACCCGCGCTT-CAACCTGCCCAT-GGCTAGATCACTTCGCTT-CGGGTCTAGA-CCCAGC 2628
Query 129 GACTA--GACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAGCTT 186
||||| | |||||| | |||||||||| ||||||| || ||| | ||| | | | |
Sbjct 2629 GACTATGGGCGCCCTGTTCGGACTCGCTTT-CGCTACGGCTTCCCCACACGGGTTAACCT 2687
Query 187 TGCCACTGAAAA-TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAA-CAAA 244
|||||||| | ||| |||| | | |||| | ||||||| |||| ||||||| | | ||
Sbjct 2688 CGCCACTGAGCACTAACTCGCAGGCTCATTCTTCAAAAGGCACGCTGTCACCCCAGCCAA 2747
Query 245 GTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGG 304
| |||||| || | ||||| ||| ||||||||||| |||||||||||||||| |||||
Sbjct 2748 GGAGGCTCCAACGGATTGTAGGCACACGGTTTCAGGTACTATTTCACTCCCCTC-CCGGG 2806
Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364
|| |||||| |||||||||||||||||| || | |||||||||| | |||||||||||
Sbjct 2807 GTACTTTTCACCTTTCCCTCACGGTACTGGTCCGCTATCGGTCACTAGGTAGTATTTAGG 2866
Query 365 CTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418
||| | ||||| ||| ||||| || | ||||||| || |||| |||||
Sbjct 2867 CTTAGCAAGTGGTCTTGCCAGATTCACACGAGATTTCTCGGGCCCCGTGCTACT 2920
>seq9489
Length=379987
Score = 268 bits (296), Expect = 2e-69
Identities = 316/414 (76%), Gaps = 13/414 (3%)
Strand=Plus/Minus
Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68
||||||||||| || | | |||||||| | || |||||||||||||| || ||
Sbjct 1297 CCACAGGTCATCCCCC--AGGTTTTCAACCCTGGTGGGTTCGGTCCTCCACGCGGTC-TT 1241
Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128
|||| ||| |||||||||||| || |||||| | | || |||||||| ||||||
Sbjct 1240 ACCCGCGCTT-CAACCTGCCCAT-GGCTAGATCACTTCGCTT-CGGGTCTAGA-CCCAGC 1185
Query 129 GACTA--GACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAGCTT 186
||||| | |||||| | |||||||||| ||||||| || ||| | ||| | | | |
Sbjct 1184 GACTATGGGCGCCCTGTTCGGACTCGCTTT-CGCTACGGCTTCCCCACACGGGTTAACCT 1126
Query 187 TGCCACTGAAAA-TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAA-CAAA 244
|||||||| | ||| |||| | | |||| | ||||||| |||| ||||||| | | ||
Sbjct 1125 CGCCACTGAGCACTAACTCGCAGGCTCATTCTTCAAAAGGCACGCTGTCACCCCAGCCAA 1066
Query 245 GTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGG 304
| |||||| || | ||||| ||| ||||||||||| |||||||||||||||| |||||
Sbjct 1065 GGAGGCTCCAACGGATTGTAGGCACACGGTTTCAGGTACTATTTCACTCCCCTC-CCGGG 1007
Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364
|| |||||| |||||||||||||||||| || | |||||||||| | |||||||||||
Sbjct 1006 GTACTTTTCACCTTTCCCTCACGGTACTGGTCCGCTATCGGTCACTAGGTAGTATTTAGG 947
Query 365 CTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418
||| | ||||| ||| ||||| || | ||||||| || |||| |||||
Sbjct 946 CTTAGCAAGTGGTCTTGCCAGATTCACACGAGATTTCTCGGGCCCCGTGCTACT 893
>seq7410
Length=428
Score = 199 bits (220), Expect = 1e-48
Identities = 250/330 (76%), Gaps = 11/330 (3%)
Strand=Plus/Minus
Query 42 GTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATC 101
|| |||||||||||||| || |||||| ||| |||||||||||| || ||||||
Sbjct 357 GTGGGTTCGGTCCTCCACGCGGTC-TTACCCGCGCTT-CAACCTGCCCAT-GGCTAGATC 301
Query 102 GCCCGGTTTTCGGGTCTATTTCCCAGCGACTA--GACGCCCTAGTAAGACTCGCTTTTCG 159
| | || |||||||| ||||||||||| |||||||| | |||||||||| ||
Sbjct 300 ACTTCGCTT-CGGGTCTAGA-CCCAGCGACTATGGACGCCCTGTTCGGACTCGCTTT-CG 244
Query 160 CTACGCCTCCCCTATTCGGTTAAGCTTTGCCACTGAAAA-TAAGTCGCTGACCCATTATA 218
||||| || ||| | ||| | | | | |||||||| | ||| |||| | | |||| |
Sbjct 243 CTACGGCTTCCCCACACGGGTTAACCTCGCCACTGAGCACTAACTCGCAGGCTCATTCTT 184
Query 219 CAAAAGGTACGCAGTCACCCAA-CAAAGTGGGCTCCCACTGCTTGTACGCATACGGTTTC 277
||||||| |||| ||||||| | | | | |||||| || | ||||| ||| ||||||||
Sbjct 183 CAAAAGGCACGCTGTCACCCCAGCCATGGAGGCTCCAACGGATTGTAGGCACACGGTTTC 124
Query 278 AGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTC 337
||| |||||||||||||||| ||||||| |||||| |||||||||| ||||| || |
Sbjct 123 AGGTACTATTTCACTCCCCTC-CCGGGGTACTTTTCCCCTTTCCCTCCGCGTACTCGTCC 65
Query 338 ACTATCGGTCAGTCAGTAGTATTTAGCCTT 367
| ||||| | | ||| ||||||| |||
Sbjct 64 CCCATCGGGCCCTACGTACTATTTAGTCTT 35
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1241482147328
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |