Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq9492 268 2e-69 seq9490 268 2e-69 seq9489 268 2e-69 seq7410 199 1e-48 >seq9492 Length=3813 Score = 268 bits (296), Expect = 2e-69 Identities = 316/414 (76%), Gaps = 13/414 (3%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||||||||| || | | |||||||| | || |||||||||||||| || || Sbjct 1297 CCACAGGTCATCCCCC--AGGTTTTCAACCCTGGTGGGTTCGGTCCTCCACGCGGTC-TT 1241 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 |||| ||| |||||||||||| || |||||| | | || |||||||| |||||| Sbjct 1240 ACCCGCGCTT-CAACCTGCCCAT-GGCTAGATCACTTCGCTT-CGGGTCTAGA-CCCAGC 1185 Query 129 GACTA--GACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAGCTT 186 ||||| | |||||| | |||||||||| ||||||| || ||| | ||| | | | | Sbjct 1184 GACTATGGGCGCCCTGTTCGGACTCGCTTT-CGCTACGGCTTCCCCACACGGGTTAACCT 1126 Query 187 TGCCACTGAAAA-TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAA-CAAA 244 |||||||| | ||| |||| | | |||| | ||||||| |||| ||||||| | | || Sbjct 1125 CGCCACTGAGCACTAACTCGCAGGCTCATTCTTCAAAAGGCACGCTGTCACCCCAGCCAA 1066 Query 245 GTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGG 304 | |||||| || | ||||| ||| ||||||||||| |||||||||||||||| ||||| Sbjct 1065 GGAGGCTCCAACGGATTGTAGGCACACGGTTTCAGGTACTATTTCACTCCCCTC-CCGGG 1007 Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364 || |||||| |||||||||||||||||| || | |||||||||| | ||||||||||| Sbjct 1006 GTACTTTTCACCTTTCCCTCACGGTACTGGTCCGCTATCGGTCACTAGGTAGTATTTAGG 947 Query 365 CTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418 ||| | ||||| ||| ||||| || | ||||||| || |||| ||||| Sbjct 946 CTTAGCAAGTGGTCTTGCCAGATTCACACGAGATTTCTCGGGCCCCGTGCTACT 893 >seq9490 Length=3813 Score = 268 bits (296), Expect = 2e-69 Identities = 316/414 (76%), Gaps = 13/414 (3%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||||||||| || | | |||||||| | || |||||||||||||| || || Sbjct 2516 CCACAGGTCATCCCCC--AGGTTTTCAACCCTGGTGGGTTCGGTCCTCCACGCGGTC-TT 2572 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 |||| ||| |||||||||||| || |||||| | | || |||||||| |||||| Sbjct 2573 ACCCGCGCTT-CAACCTGCCCAT-GGCTAGATCACTTCGCTT-CGGGTCTAGA-CCCAGC 2628 Query 129 GACTA--GACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAGCTT 186 ||||| | |||||| | |||||||||| ||||||| || ||| | ||| | | | | Sbjct 2629 GACTATGGGCGCCCTGTTCGGACTCGCTTT-CGCTACGGCTTCCCCACACGGGTTAACCT 2687 Query 187 TGCCACTGAAAA-TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAA-CAAA 244 |||||||| | ||| |||| | | |||| | ||||||| |||| ||||||| | | || Sbjct 2688 CGCCACTGAGCACTAACTCGCAGGCTCATTCTTCAAAAGGCACGCTGTCACCCCAGCCAA 2747 Query 245 GTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGG 304 | |||||| || | ||||| ||| ||||||||||| |||||||||||||||| ||||| Sbjct 2748 GGAGGCTCCAACGGATTGTAGGCACACGGTTTCAGGTACTATTTCACTCCCCTC-CCGGG 2806 Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364 || |||||| |||||||||||||||||| || | |||||||||| | ||||||||||| Sbjct 2807 GTACTTTTCACCTTTCCCTCACGGTACTGGTCCGCTATCGGTCACTAGGTAGTATTTAGG 2866 Query 365 CTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418 ||| | ||||| ||| ||||| || | ||||||| || |||| ||||| Sbjct 2867 CTTAGCAAGTGGTCTTGCCAGATTCACACGAGATTTCTCGGGCCCCGTGCTACT 2920 >seq9489 Length=379987 Score = 268 bits (296), Expect = 2e-69 Identities = 316/414 (76%), Gaps = 13/414 (3%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||||||||| || | | |||||||| | || |||||||||||||| || || Sbjct 1297 CCACAGGTCATCCCCC--AGGTTTTCAACCCTGGTGGGTTCGGTCCTCCACGCGGTC-TT 1241 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 |||| ||| |||||||||||| || |||||| | | || |||||||| |||||| Sbjct 1240 ACCCGCGCTT-CAACCTGCCCAT-GGCTAGATCACTTCGCTT-CGGGTCTAGA-CCCAGC 1185 Query 129 GACTA--GACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAGCTT 186 ||||| | |||||| | |||||||||| ||||||| || ||| | ||| | | | | Sbjct 1184 GACTATGGGCGCCCTGTTCGGACTCGCTTT-CGCTACGGCTTCCCCACACGGGTTAACCT 1126 Query 187 TGCCACTGAAAA-TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAA-CAAA 244 |||||||| | ||| |||| | | |||| | ||||||| |||| ||||||| | | || Sbjct 1125 CGCCACTGAGCACTAACTCGCAGGCTCATTCTTCAAAAGGCACGCTGTCACCCCAGCCAA 1066 Query 245 GTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGG 304 | |||||| || | ||||| ||| ||||||||||| |||||||||||||||| ||||| Sbjct 1065 GGAGGCTCCAACGGATTGTAGGCACACGGTTTCAGGTACTATTTCACTCCCCTC-CCGGG 1007 Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364 || |||||| |||||||||||||||||| || | |||||||||| | ||||||||||| Sbjct 1006 GTACTTTTCACCTTTCCCTCACGGTACTGGTCCGCTATCGGTCACTAGGTAGTATTTAGG 947 Query 365 CTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418 ||| | ||||| ||| ||||| || | ||||||| || |||| ||||| Sbjct 946 CTTAGCAAGTGGTCTTGCCAGATTCACACGAGATTTCTCGGGCCCCGTGCTACT 893 >seq7410 Length=428 Score = 199 bits (220), Expect = 1e-48 Identities = 250/330 (76%), Gaps = 11/330 (3%) Strand=Plus/Minus Query 42 GTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATC 101 || |||||||||||||| || |||||| ||| |||||||||||| || |||||| Sbjct 357 GTGGGTTCGGTCCTCCACGCGGTC-TTACCCGCGCTT-CAACCTGCCCAT-GGCTAGATC 301 Query 102 GCCCGGTTTTCGGGTCTATTTCCCAGCGACTA--GACGCCCTAGTAAGACTCGCTTTTCG 159 | | || |||||||| ||||||||||| |||||||| | |||||||||| || Sbjct 300 ACTTCGCTT-CGGGTCTAGA-CCCAGCGACTATGGACGCCCTGTTCGGACTCGCTTT-CG 244 Query 160 CTACGCCTCCCCTATTCGGTTAAGCTTTGCCACTGAAAA-TAAGTCGCTGACCCATTATA 218 ||||| || ||| | ||| | | | | |||||||| | ||| |||| | | |||| | Sbjct 243 CTACGGCTTCCCCACACGGGTTAACCTCGCCACTGAGCACTAACTCGCAGGCTCATTCTT 184 Query 219 CAAAAGGTACGCAGTCACCCAA-CAAAGTGGGCTCCCACTGCTTGTACGCATACGGTTTC 277 ||||||| |||| ||||||| | | | | |||||| || | ||||| ||| |||||||| Sbjct 183 CAAAAGGCACGCTGTCACCCCAGCCATGGAGGCTCCAACGGATTGTAGGCACACGGTTTC 124 Query 278 AGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTC 337 ||| |||||||||||||||| ||||||| |||||| |||||||||| ||||| || | Sbjct 123 AGGTACTATTTCACTCCCCTC-CCGGGGTACTTTTCCCCTTTCCCTCCGCGTACTCGTCC 65 Query 338 ACTATCGGTCAGTCAGTAGTATTTAGCCTT 367 | ||||| | | ||| ||||||| ||| Sbjct 64 CCCATCGGGCCCTACGTACTATTTAGTCTT 35 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241482147328