Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq9492 425 1e-116 seq9490 425 1e-116 seq9489 425 1e-116 seq2726 221 3e-55 >seq9492 Length=3813 Score = 425 bits (470), Expect = 1e-116 Identities = 350/430 (81%), Gaps = 31/430 (7%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 |||||||||||||||||||||||||||| ||||||| ||||||||| || ||| || || Sbjct 1925 CGACTACGCCTGTCGGCCTCGCCTTAGGTCCCGACTTACCCAGGGCGGATTAACCTGGCC 1866 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACACGCTACTCATGCCTG 120 ||||||||||||| | |||||||||||| ||| |||||||| ||||||||||||||| Sbjct 1865 CTGGAACCCTTGGTCATTCGGCGGACGGGTTTCTCACCCGTCTTTCGCTACTCATGCCTG 1806 Query 121 CATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACACGAC 180 |||||||||||| | ||||||| | || ||| || |||||||| | ||||||| Sbjct 1805 CATTCTCACTCGTGTGGGCTCCACCGCTGGGTTCCCCCGCGGCTTCACCGCCCACACGAC 1746 Query 181 GCTCCCCTACCCA-------------ACCACACAGGT----------------TGCCACA 211 ||||||||||||| ||||| ||| |||||| Sbjct 1745 GCTCCCCTACCCACCTGCGCCTCTGGACCACGAAGGCCTGAGTTGAGCGCAGATGCCACG 1686 Query 212 GCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAG 271 |||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct 1685 GCTTCGGCGGTGTACTTGAGCCCCGCTACATTGTCGGCGCGGAATCACTTGACCAGTGAG 1626 Query 272 CTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAA 331 ||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||| Sbjct 1625 CTATTACGCACTCTTTCAAGGGTGGCTGCTTCTAAGCCAACCTCCTGGTTGTCTGTGCAA 1566 Query 332 CTCCACATCCTTTCCCACTGAGTCAC-CACTTAGGGGCCTTAGCTGATGATCTGGGCTGT 390 ||||||||||||||||||| || ||| | ||||||||||||||| | || |||||||||| Sbjct 1565 CTCCACATCCTTTCCCACTTAG-CACACGCTTAGGGGCCTTAGCCGGTGGTCTGGGCTGT 1507 Query 391 TTCCCTCTCG 400 |||||||||| Sbjct 1506 TTCCCTCTCG 1497 >seq9490 Length=3813 Score = 425 bits (470), Expect = 1e-116 Identities = 350/430 (81%), Gaps = 31/430 (7%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 |||||||||||||||||||||||||||| ||||||| ||||||||| || ||| || || Sbjct 1888 CGACTACGCCTGTCGGCCTCGCCTTAGGTCCCGACTTACCCAGGGCGGATTAACCTGGCC 1947 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACACGCTACTCATGCCTG 120 ||||||||||||| | |||||||||||| ||| |||||||| ||||||||||||||| Sbjct 1948 CTGGAACCCTTGGTCATTCGGCGGACGGGTTTCTCACCCGTCTTTCGCTACTCATGCCTG 2007 Query 121 CATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACACGAC 180 |||||||||||| | ||||||| | || ||| || |||||||| | ||||||| Sbjct 2008 CATTCTCACTCGTGTGGGCTCCACCGCTGGGTTCCCCCGCGGCTTCACCGCCCACACGAC 2067 Query 181 GCTCCCCTACCCA-------------ACCACACAGGT----------------TGCCACA 211 ||||||||||||| ||||| ||| |||||| Sbjct 2068 GCTCCCCTACCCACCTGCGCCTCTGGACCACGAAGGCCTGAGTTGAGCGCAGATGCCACG 2127 Query 212 GCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAG 271 |||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct 2128 GCTTCGGCGGTGTACTTGAGCCCCGCTACATTGTCGGCGCGGAATCACTTGACCAGTGAG 2187 Query 272 CTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAA 331 ||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||| Sbjct 2188 CTATTACGCACTCTTTCAAGGGTGGCTGCTTCTAAGCCAACCTCCTGGTTGTCTGTGCAA 2247 Query 332 CTCCACATCCTTTCCCACTGAGTCAC-CACTTAGGGGCCTTAGCTGATGATCTGGGCTGT 390 ||||||||||||||||||| || ||| | ||||||||||||||| | || |||||||||| Sbjct 2248 CTCCACATCCTTTCCCACTTAG-CACACGCTTAGGGGCCTTAGCCGGTGGTCTGGGCTGT 2306 Query 391 TTCCCTCTCG 400 |||||||||| Sbjct 2307 TTCCCTCTCG 2316 >seq9489 Length=379987 Score = 425 bits (470), Expect = 1e-116 Identities = 350/430 (81%), Gaps = 31/430 (7%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 |||||||||||||||||||||||||||| ||||||| ||||||||| || ||| || || Sbjct 1925 CGACTACGCCTGTCGGCCTCGCCTTAGGTCCCGACTTACCCAGGGCGGATTAACCTGGCC 1866 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACACGCTACTCATGCCTG 120 ||||||||||||| | |||||||||||| ||| |||||||| ||||||||||||||| Sbjct 1865 CTGGAACCCTTGGTCATTCGGCGGACGGGTTTCTCACCCGTCTTTCGCTACTCATGCCTG 1806 Query 121 CATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACACGAC 180 |||||||||||| | ||||||| | || ||| || |||||||| | ||||||| Sbjct 1805 CATTCTCACTCGTGTGGGCTCCACCGCTGGGTTCCCCCGCGGCTTCACCGCCCACACGAC 1746 Query 181 GCTCCCCTACCCA-------------ACCACACAGGT----------------TGCCACA 211 ||||||||||||| ||||| ||| |||||| Sbjct 1745 GCTCCCCTACCCACCTGCGCCTCTGGACCACGAAGGCCTGAGTTGAGCGCAGATGCCACG 1686 Query 212 GCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAG 271 |||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct 1685 GCTTCGGCGGTGTACTTGAGCCCCGCTACATTGTCGGCGCGGAATCACTTGACCAGTGAG 1626 Query 272 CTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAA 331 ||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||| Sbjct 1625 CTATTACGCACTCTTTCAAGGGTGGCTGCTTCTAAGCCAACCTCCTGGTTGTCTGTGCAA 1566 Query 332 CTCCACATCCTTTCCCACTGAGTCAC-CACTTAGGGGCCTTAGCTGATGATCTGGGCTGT 390 ||||||||||||||||||| || ||| | ||||||||||||||| | || |||||||||| Sbjct 1565 CTCCACATCCTTTCCCACTTAG-CACACGCTTAGGGGCCTTAGCCGGTGGTCTGGGCTGT 1507 Query 391 TTCCCTCTCG 400 |||||||||| Sbjct 1506 TTCCCTCTCG 1497 >seq2726 Length=525 Score = 221 bits (244), Expect = 3e-55 Identities = 144/156 (92%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 245 TCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCC 304 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 275 TCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGGTGGCTGCTTCT 334 Query 305 AAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAGTCAC-CACTTA 363 | ||||||||||||||||||| ||||||||||||||||||||||| || ||| | |||| Sbjct 335 ACGCCAACCTCCTGGTTGTCTGTGCAACTCCACATCCTTTCCCACTTAG-CACACGCTTA 393 Query 364 GGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTC 399 ||||||||||| | || ||||||||||||||||||| Sbjct 394 GGGGCCTTAGCCGGTGGTCTGGGCTGTTTCCCTCTC 429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177488222208