Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq9492 80.6 2e-13 seq9490 80.6 2e-13 seq9489 80.6 2e-13 >seq9492 Length=3813 Score = 80.6 bits (88), Expect = 2e-13 Identities = 92/121 (76%), Gaps = 6/121 (5%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCG---GATCACTATGAC 57 ||||||||||||||||||||| ||| |||||| || |||||||| |||||||| | Sbjct 3090 TACCTTTTATCCGTTGAGCGACGGCGCTTCCA--CA-AGCCACCGCCGGATCACTAGTTC 3034 Query 58 CTGCTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCAC 117 | |||||| |||||| | ||| |||| || |||||| | ||| ||| |||||| Sbjct 3033 CGACTTTCGTCCCTGCTCGACCTGTCAGTCTCACAGTCAAGCTCCCTTGTGCACTTGCAC 2974 Query 118 T 118 | Sbjct 2973 T 2973 >seq9490 Length=3813 Score = 80.6 bits (88), Expect = 2e-13 Identities = 92/121 (76%), Gaps = 6/121 (5%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCA---CCGGATCACTATGAC 57 ||||||||||||||||||||| ||| |||||| || ||||| ||||||||||| | Sbjct 723 TACCTTTTATCCGTTGAGCGACGGCGCTTCCA--CA-AGCCACCGCCGGATCACTAGTTC 779 Query 58 CTGCTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCAC 117 | |||||| |||||| | ||| |||| || |||||| | ||| ||| |||||| Sbjct 780 CGACTTTCGTCCCTGCTCGACCTGTCAGTCTCACAGTCAAGCTCCCTTGTGCACTTGCAC 839 Query 118 T 118 | Sbjct 840 T 840 >seq9489 Length=379987 Score = 80.6 bits (88), Expect = 2e-13 Identities = 92/121 (76%), Gaps = 6/121 (5%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCG---GATCACTATGAC 57 ||||||||||||||||||||| ||| |||||| || |||||||| |||||||| | Sbjct 3090 TACCTTTTATCCGTTGAGCGACGGCGCTTCCA--CA-AGCCACCGCCGGATCACTAGTTC 3034 Query 58 CTGCTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCAC 117 | |||||| |||||| | ||| |||| || |||||| | ||| ||| |||||| Sbjct 3033 CGACTTTCGTCCCTGCTCGACCTGTCAGTCTCACAGTCAAGCTCCCTTGTGCACTTGCAC 2974 Query 118 T 118 | Sbjct 2973 T 2973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351968676400