Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq9492 257 6e-66 seq9490 257 6e-66 seq9489 257 6e-66 seq7410 109 2e-21 seq2726 89.7 2e-15 >seq9492 Length=3813 Score = 257 bits (284), Expect = 6e-66 Identities = 392/545 (72%), Gaps = 20/545 (4%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGAC---AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCC 58 ||||||||||||||||| | ||||||||||| |||||||||| | |||||||||| || Sbjct 1159 CGAGTCCGAACAGGGCGCCCATAGTCGCTGGGTCTAGACCCGAAGCGAAGTGATCTAGCC 1218 Query 59 ATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAA 118 |||| |||| ||||| ||||| || | |||||| |||||||||| | |||||||| Sbjct 1219 ATGGGCAGGTTGAAGCGCGGGTAAGACCGCGTGGAGGACCGAACCCACCAGGGTTGAAAA 1278 Query 119 ATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTC 178 | |||||||| |||||| |||||||||||||| || ||||||| | ||||||||||| Sbjct 1279 CCTGGGGGATGACCTGTGGTTAGGGGTGAAAGGCCAATCAAACTTCGTGATAGCTGGTTC 1338 Query 179 TCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC-CATCGGGGGTAGAGC-ACTGTT 236 || |||||| |||||||| || ||| || | | ||| |||||||| |||| Sbjct 1339 TCCCCGAAATGCATTTAGGTGCAGCGTCACGTGTTTCTTGCCGGAGGTAGAGCTACTG-G 1397 Query 237 ATGG-CTAGGGG---GTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCA 292 |||| | | ||| || | ||| || | | |||||||||||||| | | Sbjct 1398 ATGGCCGATGGGCCCTACAAGGTTACTGACGTCAGC----CAAACTCCGAATGCCGGTAA 1453 Query 293 GTTTTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCC 352 || | || || |||||| ||| | |||| ||||| ||||||| || | || Sbjct 1454 GTGAAAGCGTGGCAGTGAGACTGCGGGGGATAAGCTCCGTAGTCGAGAGGGAAACAGCCC 1513 Query 353 GGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTA 412 ||| | | ||||||||||| || | ||||||| | || || || |||| Sbjct 1514 AGACCACCGGCTAAGGCCCCTAAGCGTGTGCTAAGTGGGA--AAGGATGTGGAGTTGCAC 1571 Query 413 AGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCAC 472 ||||| | |||| |||||||| |||||||||| | || ||||||||||||| ||||||| Sbjct 1572 AGACAACCAGGAGGTTGGCTTAGAAGCAGCCA-CCCTTGAAAGAGTGCGTAATAGCTCAC 1630 Query 473 TAGTCGAG-GAGTCGGGCGTGGATAAT-AATCGGGTATTAAGTTGTCTACCGAAGCAGTG 530 | ||| || || || ||| || ||| | |||| | |||| | ||||||| ||| Sbjct 1631 TGGTCAAGTGATTC-CGCGCCGACAATGTAGCGGGGCTCAAGTACACCGCCGAAGCCGTG 1689 Query 531 GGATC 535 | ||| Sbjct 1690 GCATC 1694 >seq9490 Length=3813 Score = 257 bits (284), Expect = 6e-66 Identities = 392/545 (72%), Gaps = 20/545 (4%) Strand=Plus/Minus Query 2 CGAGTCCGAACAGGGCGAC---AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCC 58 ||||||||||||||||| | ||||||||||| |||||||||| | |||||||||| || Sbjct 2654 CGAGTCCGAACAGGGCGCCCATAGTCGCTGGGTCTAGACCCGAAGCGAAGTGATCTAGCC 2595 Query 59 ATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAA 118 |||| |||| ||||| ||||| || | |||||| |||||||||| | |||||||| Sbjct 2594 ATGGGCAGGTTGAAGCGCGGGTAAGACCGCGTGGAGGACCGAACCCACCAGGGTTGAAAA 2535 Query 119 ATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTC 178 | |||||||| |||||| |||||||||||||| || ||||||| | ||||||||||| Sbjct 2534 CCTGGGGGATGACCTGTGGTTAGGGGTGAAAGGCCAATCAAACTTCGTGATAGCTGGTTC 2475 Query 179 TCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC-CATCGGGGGTAGAGC-ACTGTT 236 || |||||| |||||||| || ||| || | | ||| |||||||| |||| Sbjct 2474 TCCCCGAAATGCATTTAGGTGCAGCGTCACGTGTTTCTTGCCGGAGGTAGAGCTACTG-G 2416 Query 237 ATGG-CTAGGGG---GTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCA 292 |||| | | ||| || | ||| || | | |||||||||||||| | | Sbjct 2415 ATGGCCGATGGGCCCTACAAGGTTACTGACGTCAGC----CAAACTCCGAATGCCGGTAA 2360 Query 293 GTTTTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCC 352 || | || || |||||| ||| | |||| ||||| ||||||| || | || Sbjct 2359 GTGAAAGCGTGGCAGTGAGACTGCGGGGGATAAGCTCCGTAGTCGAGAGGGAAACAGCCC 2300 Query 353 GGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTA 412 ||| | | ||||||||||| || | ||||||| | || || || |||| Sbjct 2299 AGACCACCGGCTAAGGCCCCTAAGCGTGTGCTAAGTGGGA--AAGGATGTGGAGTTGCAC 2242 Query 413 AGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCAC 472 ||||| | |||| |||||||| |||||||||| | || ||||||||||||| ||||||| Sbjct 2241 AGACAACCAGGAGGTTGGCTTAGAAGCAGCCA-CCCTTGAAAGAGTGCGTAATAGCTCAC 2183 Query 473 TAGTCGAG-GAGTCGGGCGTGGATAAT-AATCGGGTATTAAGTTGTCTACCGAAGCAGTG 530 | ||| || || || ||| || ||| | |||| | |||| | ||||||| ||| Sbjct 2182 TGGTCAAGTGATTC-CGCGCCGACAATGTAGCGGGGCTCAAGTACACCGCCGAAGCCGTG 2124 Query 531 GGATC 535 | ||| Sbjct 2123 GCATC 2119 >seq9489 Length=379987 Score = 257 bits (284), Expect = 6e-66 Identities = 392/545 (72%), Gaps = 20/545 (4%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGAC---AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCC 58 ||||||||||||||||| | ||||||||||| |||||||||| | |||||||||| || Sbjct 1159 CGAGTCCGAACAGGGCGCCCATAGTCGCTGGGTCTAGACCCGAAGCGAAGTGATCTAGCC 1218 Query 59 ATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAA 118 |||| |||| ||||| ||||| || | |||||| |||||||||| | |||||||| Sbjct 1219 ATGGGCAGGTTGAAGCGCGGGTAAGACCGCGTGGAGGACCGAACCCACCAGGGTTGAAAA 1278 Query 119 ATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTC 178 | |||||||| |||||| |||||||||||||| || ||||||| | ||||||||||| Sbjct 1279 CCTGGGGGATGACCTGTGGTTAGGGGTGAAAGGCCAATCAAACTTCGTGATAGCTGGTTC 1338 Query 179 TCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC-CATCGGGGGTAGAGC-ACTGTT 236 || |||||| |||||||| || ||| || | | ||| |||||||| |||| Sbjct 1339 TCCCCGAAATGCATTTAGGTGCAGCGTCACGTGTTTCTTGCCGGAGGTAGAGCTACTG-G 1397 Query 237 ATGG-CTAGGGG---GTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCA 292 |||| | | ||| || | ||| || | | |||||||||||||| | | Sbjct 1398 ATGGCCGATGGGCCCTACAAGGTTACTGACGTCAGC----CAAACTCCGAATGCCGGTAA 1453 Query 293 GTTTTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCC 352 || | || || |||||| ||| | |||| ||||| ||||||| || | || Sbjct 1454 GTGAAAGCGTGGCAGTGAGACTGCGGGGGATAAGCTCCGTAGTCGAGAGGGAAACAGCCC 1513 Query 353 GGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTA 412 ||| | | ||||||||||| || | ||||||| | || || || |||| Sbjct 1514 AGACCACCGGCTAAGGCCCCTAAGCGTGTGCTAAGTGGGA--AAGGATGTGGAGTTGCAC 1571 Query 413 AGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCAC 472 ||||| | |||| |||||||| |||||||||| | || ||||||||||||| ||||||| Sbjct 1572 AGACAACCAGGAGGTTGGCTTAGAAGCAGCCA-CCCTTGAAAGAGTGCGTAATAGCTCAC 1630 Query 473 TAGTCGAG-GAGTCGGGCGTGGATAAT-AATCGGGTATTAAGTTGTCTACCGAAGCAGTG 530 | ||| || || || ||| || ||| | |||| | |||| | ||||||| ||| Sbjct 1631 TGGTCAAGTGATTC-CGCGCCGACAATGTAGCGGGGCTCAAGTACACCGCCGAAGCCGTG 1689 Query 531 GGATC 535 | ||| Sbjct 1690 GCATC 1694 >seq7410 Length=428 Score = 109 bits (120), Expect = 2e-21 Identities = 117/150 (78%), Gaps = 6/150 (4%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGAC---AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCC 58 ||||||||||||||||| | ||||||||||| |||||||||| | |||||||||| || Sbjct 250 CGAGTCCGAACAGGGCGTCCATAGTCGCTGGGTCTAGACCCGAAGCGAAGTGATCTAGCC 309 Query 59 ATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAA 118 |||| |||| ||||| ||||| || | |||||| |||||||||| |||| || Sbjct 310 ATGGGCAGGTTGAAGCGCGGGTAAGACCGCGTGGAGGACCGAACCCACCCGGGTTG-CAA 368 Query 119 ATTAGG-GGATGAGCTGTGGGTAGG-GGTG 146 || ||| || |||| || ||||| |||| Sbjct 369 ATCAGGCGGTGGAGCCGTTTGTAGGTGGTG 398 >seq2726 Length=525 Score = 89.7 bits (98), Expect = 2e-15 Identities = 146/208 (70%), Gaps = 3/208 (1%) Strand=Plus/Minus Query 273 CAAACTCCGAATGCGCATCAGTTTTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGT 332 |||||||||||||| | ||| | || || |||||| ||| | |||| ||||| Sbjct 493 CAAACTCCGAATGCCGGTAAGTGAAAGCGTGGCAGTGAGACTGCGGGGGATAAGCTCCGT 434 Query 333 GCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAA 392 |||||| || | || ||| | | ||||||||||| || | ||||||| | Sbjct 433 AGTGGAGAGGGAAACAGCCCAGACCACCGGCTAAGGCCCCTAAGCGTGTGCTAAGTGGGA 374 Query 393 CTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTA 452 || || || |||| ||||| | |||| |||||| | |||||||||| | || | Sbjct 373 --AAGGATGTGGAGTTGCACAGACAACCAGGAGGTTGGCGTAGAAGCAGCCA-CCCTTGA 317 Query 453 AAGAGTGCGTAACAGCTCACTAGTCGAG 480 |||||||||||| |||||||| ||| || Sbjct 316 AAGAGTGCGTAATAGCTCACTGGTCAAG 289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689439623168