Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= AAMG01002193.1
Length=560
Score E
Sequences producing significant alignments: (Bits) Value
seq9492 257 6e-66
seq9490 257 6e-66
seq9489 257 6e-66
seq7410 109 2e-21
seq2726 89.7 2e-15
>seq9492
Length=3813
Score = 257 bits (284), Expect = 6e-66
Identities = 392/545 (72%), Gaps = 20/545 (4%)
Strand=Plus/Plus
Query 2 CGAGTCCGAACAGGGCGAC---AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCC 58
||||||||||||||||| | ||||||||||| |||||||||| | |||||||||| ||
Sbjct 1159 CGAGTCCGAACAGGGCGCCCATAGTCGCTGGGTCTAGACCCGAAGCGAAGTGATCTAGCC 1218
Query 59 ATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAA 118
|||| |||| ||||| ||||| || | |||||| |||||||||| | ||||||||
Sbjct 1219 ATGGGCAGGTTGAAGCGCGGGTAAGACCGCGTGGAGGACCGAACCCACCAGGGTTGAAAA 1278
Query 119 ATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTC 178
| |||||||| |||||| |||||||||||||| || ||||||| | |||||||||||
Sbjct 1279 CCTGGGGGATGACCTGTGGTTAGGGGTGAAAGGCCAATCAAACTTCGTGATAGCTGGTTC 1338
Query 179 TCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC-CATCGGGGGTAGAGC-ACTGTT 236
|| |||||| |||||||| || ||| || | | ||| |||||||| ||||
Sbjct 1339 TCCCCGAAATGCATTTAGGTGCAGCGTCACGTGTTTCTTGCCGGAGGTAGAGCTACTG-G 1397
Query 237 ATGG-CTAGGGG---GTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCA 292
|||| | | ||| || | ||| || | | |||||||||||||| | |
Sbjct 1398 ATGGCCGATGGGCCCTACAAGGTTACTGACGTCAGC----CAAACTCCGAATGCCGGTAA 1453
Query 293 GTTTTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCC 352
|| | || || |||||| ||| | |||| ||||| ||||||| || | ||
Sbjct 1454 GTGAAAGCGTGGCAGTGAGACTGCGGGGGATAAGCTCCGTAGTCGAGAGGGAAACAGCCC 1513
Query 353 GGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTA 412
||| | | ||||||||||| || | ||||||| | || || || ||||
Sbjct 1514 AGACCACCGGCTAAGGCCCCTAAGCGTGTGCTAAGTGGGA--AAGGATGTGGAGTTGCAC 1571
Query 413 AGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCAC 472
||||| | |||| |||||||| |||||||||| | || ||||||||||||| |||||||
Sbjct 1572 AGACAACCAGGAGGTTGGCTTAGAAGCAGCCA-CCCTTGAAAGAGTGCGTAATAGCTCAC 1630
Query 473 TAGTCGAG-GAGTCGGGCGTGGATAAT-AATCGGGTATTAAGTTGTCTACCGAAGCAGTG 530
| ||| || || || ||| || ||| | |||| | |||| | ||||||| |||
Sbjct 1631 TGGTCAAGTGATTC-CGCGCCGACAATGTAGCGGGGCTCAAGTACACCGCCGAAGCCGTG 1689
Query 531 GGATC 535
| |||
Sbjct 1690 GCATC 1694
>seq9490
Length=3813
Score = 257 bits (284), Expect = 6e-66
Identities = 392/545 (72%), Gaps = 20/545 (4%)
Strand=Plus/Minus
Query 2 CGAGTCCGAACAGGGCGAC---AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCC 58
||||||||||||||||| | ||||||||||| |||||||||| | |||||||||| ||
Sbjct 2654 CGAGTCCGAACAGGGCGCCCATAGTCGCTGGGTCTAGACCCGAAGCGAAGTGATCTAGCC 2595
Query 59 ATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAA 118
|||| |||| ||||| ||||| || | |||||| |||||||||| | ||||||||
Sbjct 2594 ATGGGCAGGTTGAAGCGCGGGTAAGACCGCGTGGAGGACCGAACCCACCAGGGTTGAAAA 2535
Query 119 ATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTC 178
| |||||||| |||||| |||||||||||||| || ||||||| | |||||||||||
Sbjct 2534 CCTGGGGGATGACCTGTGGTTAGGGGTGAAAGGCCAATCAAACTTCGTGATAGCTGGTTC 2475
Query 179 TCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC-CATCGGGGGTAGAGC-ACTGTT 236
|| |||||| |||||||| || ||| || | | ||| |||||||| ||||
Sbjct 2474 TCCCCGAAATGCATTTAGGTGCAGCGTCACGTGTTTCTTGCCGGAGGTAGAGCTACTG-G 2416
Query 237 ATGG-CTAGGGG---GTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCA 292
|||| | | ||| || | ||| || | | |||||||||||||| | |
Sbjct 2415 ATGGCCGATGGGCCCTACAAGGTTACTGACGTCAGC----CAAACTCCGAATGCCGGTAA 2360
Query 293 GTTTTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCC 352
|| | || || |||||| ||| | |||| ||||| ||||||| || | ||
Sbjct 2359 GTGAAAGCGTGGCAGTGAGACTGCGGGGGATAAGCTCCGTAGTCGAGAGGGAAACAGCCC 2300
Query 353 GGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTA 412
||| | | ||||||||||| || | ||||||| | || || || ||||
Sbjct 2299 AGACCACCGGCTAAGGCCCCTAAGCGTGTGCTAAGTGGGA--AAGGATGTGGAGTTGCAC 2242
Query 413 AGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCAC 472
||||| | |||| |||||||| |||||||||| | || ||||||||||||| |||||||
Sbjct 2241 AGACAACCAGGAGGTTGGCTTAGAAGCAGCCA-CCCTTGAAAGAGTGCGTAATAGCTCAC 2183
Query 473 TAGTCGAG-GAGTCGGGCGTGGATAAT-AATCGGGTATTAAGTTGTCTACCGAAGCAGTG 530
| ||| || || || ||| || ||| | |||| | |||| | ||||||| |||
Sbjct 2182 TGGTCAAGTGATTC-CGCGCCGACAATGTAGCGGGGCTCAAGTACACCGCCGAAGCCGTG 2124
Query 531 GGATC 535
| |||
Sbjct 2123 GCATC 2119
>seq9489
Length=379987
Score = 257 bits (284), Expect = 6e-66
Identities = 392/545 (72%), Gaps = 20/545 (4%)
Strand=Plus/Plus
Query 2 CGAGTCCGAACAGGGCGAC---AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCC 58
||||||||||||||||| | ||||||||||| |||||||||| | |||||||||| ||
Sbjct 1159 CGAGTCCGAACAGGGCGCCCATAGTCGCTGGGTCTAGACCCGAAGCGAAGTGATCTAGCC 1218
Query 59 ATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAA 118
|||| |||| ||||| ||||| || | |||||| |||||||||| | ||||||||
Sbjct 1219 ATGGGCAGGTTGAAGCGCGGGTAAGACCGCGTGGAGGACCGAACCCACCAGGGTTGAAAA 1278
Query 119 ATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTC 178
| |||||||| |||||| |||||||||||||| || ||||||| | |||||||||||
Sbjct 1279 CCTGGGGGATGACCTGTGGTTAGGGGTGAAAGGCCAATCAAACTTCGTGATAGCTGGTTC 1338
Query 179 TCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC-CATCGGGGGTAGAGC-ACTGTT 236
|| |||||| |||||||| || ||| || | | ||| |||||||| ||||
Sbjct 1339 TCCCCGAAATGCATTTAGGTGCAGCGTCACGTGTTTCTTGCCGGAGGTAGAGCTACTG-G 1397
Query 237 ATGG-CTAGGGG---GTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCA 292
|||| | | ||| || | ||| || | | |||||||||||||| | |
Sbjct 1398 ATGGCCGATGGGCCCTACAAGGTTACTGACGTCAGC----CAAACTCCGAATGCCGGTAA 1453
Query 293 GTTTTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCC 352
|| | || || |||||| ||| | |||| ||||| ||||||| || | ||
Sbjct 1454 GTGAAAGCGTGGCAGTGAGACTGCGGGGGATAAGCTCCGTAGTCGAGAGGGAAACAGCCC 1513
Query 353 GGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTA 412
||| | | ||||||||||| || | ||||||| | || || || ||||
Sbjct 1514 AGACCACCGGCTAAGGCCCCTAAGCGTGTGCTAAGTGGGA--AAGGATGTGGAGTTGCAC 1571
Query 413 AGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCAC 472
||||| | |||| |||||||| |||||||||| | || ||||||||||||| |||||||
Sbjct 1572 AGACAACCAGGAGGTTGGCTTAGAAGCAGCCA-CCCTTGAAAGAGTGCGTAATAGCTCAC 1630
Query 473 TAGTCGAG-GAGTCGGGCGTGGATAAT-AATCGGGTATTAAGTTGTCTACCGAAGCAGTG 530
| ||| || || || ||| || ||| | |||| | |||| | ||||||| |||
Sbjct 1631 TGGTCAAGTGATTC-CGCGCCGACAATGTAGCGGGGCTCAAGTACACCGCCGAAGCCGTG 1689
Query 531 GGATC 535
| |||
Sbjct 1690 GCATC 1694
>seq7410
Length=428
Score = 109 bits (120), Expect = 2e-21
Identities = 117/150 (78%), Gaps = 6/150 (4%)
Strand=Plus/Plus
Query 2 CGAGTCCGAACAGGGCGAC---AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCC 58
||||||||||||||||| | ||||||||||| |||||||||| | |||||||||| ||
Sbjct 250 CGAGTCCGAACAGGGCGTCCATAGTCGCTGGGTCTAGACCCGAAGCGAAGTGATCTAGCC 309
Query 59 ATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAA 118
|||| |||| ||||| ||||| || | |||||| |||||||||| |||| ||
Sbjct 310 ATGGGCAGGTTGAAGCGCGGGTAAGACCGCGTGGAGGACCGAACCCACCCGGGTTG-CAA 368
Query 119 ATTAGG-GGATGAGCTGTGGGTAGG-GGTG 146
|| ||| || |||| || ||||| ||||
Sbjct 369 ATCAGGCGGTGGAGCCGTTTGTAGGTGGTG 398
>seq2726
Length=525
Score = 89.7 bits (98), Expect = 2e-15
Identities = 146/208 (70%), Gaps = 3/208 (1%)
Strand=Plus/Minus
Query 273 CAAACTCCGAATGCGCATCAGTTTTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGT 332
|||||||||||||| | ||| | || || |||||| ||| | |||| |||||
Sbjct 493 CAAACTCCGAATGCCGGTAAGTGAAAGCGTGGCAGTGAGACTGCGGGGGATAAGCTCCGT 434
Query 333 GCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAA 392
|||||| || | || ||| | | ||||||||||| || | ||||||| |
Sbjct 433 AGTGGAGAGGGAAACAGCCCAGACCACCGGCTAAGGCCCCTAAGCGTGTGCTAAGTGGGA 374
Query 393 CTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTA 452
|| || || |||| ||||| | |||| |||||| | |||||||||| | || |
Sbjct 373 --AAGGATGTGGAGTTGCACAGACAACCAGGAGGTTGGCGTAGAAGCAGCCA-CCCTTGA 317
Query 453 AAGAGTGCGTAACAGCTCACTAGTCGAG 480
|||||||||||| |||||||| ||| ||
Sbjct 316 AAGAGTGCGTAATAGCTCACTGGTCAAG 289
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1689439623168
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |