Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= AAMG01002194.1
Length=319
Score E
Sequences producing significant alignments: (Bits) Value
seq9492 132 9e-29
seq9490 132 9e-29
seq9489 132 9e-29
seq3013 107 4e-21
>seq9492
Length=3813
Score = 132 bits (146), Expect = 9e-29
Identities = 184/259 (71%), Gaps = 24/259 (9%)
Strand=Plus/Plus
Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60
|| ||||| ||||||||||||||| | || ||| ||||||||| ||||| |||||||
Sbjct 461 AGGGCACAGGGTGGATGCCTTGGCACTAGGAGCCGAAGAAGGACGTGGTAGCCTGCGATA 520
Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120
||| ||||||| |||||| || ||||||| | ||||||||||||| ||||| ||
Sbjct 521 AGCCTCGGGGAGCTGGCAAACGAGCTGTGATCCGAGGGTTTCCGAATGGGGGAACCCCGC 580
Query 121 CCTTTGGGTCATTGCATG----------CTGAATACATA-GGTATGCAAAGCGAACGCGG 169
| | ||||| | || ||||||| ||| ||| || || ||||| |
Sbjct 581 AC---GAGTCATGTCGTGTGACCCGCACCTGAATATATAGGGTGTGTGGAGGGAACGTCG 637
Query 170 CGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTG 229
||| |||||||||| |||| | |||||| | || ||||| |||||||
Sbjct 638 GGAAGTGAAACATCTCAGTACCGACAGGAAGA----------GATATTCCGTGAGTAGTG 687
Query 230 GCGAGCGAAATGGGATGAG 248
|||||||||| |||||||
Sbjct 688 GCGAGCGAAAGCGGATGAG 706
>seq9490
Length=3813
Score = 132 bits (146), Expect = 9e-29
Identities = 184/259 (71%), Gaps = 24/259 (9%)
Strand=Plus/Minus
Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60
|| ||||| ||||||||||||||| | || ||| ||||||||| ||||| |||||||
Sbjct 3352 AGGGCACAGGGTGGATGCCTTGGCACTAGGAGCCGAAGAAGGACGTGGTAGCCTGCGATA 3293
Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120
||| ||||||| |||||| || ||||||| | ||||||||||||| ||||| ||
Sbjct 3292 AGCCTCGGGGAGCTGGCAAACGAGCTGTGATCCGAGGGTTTCCGAATGGGGGAACCCCGC 3233
Query 121 CCTTTGGGTCATTGCATG----------CTGAATACATA-GGTATGCAAAGCGAACGCGG 169
| | ||||| | || ||||||| ||| ||| || || ||||| |
Sbjct 3232 AC---GAGTCATGTCGTGTGACCCGCACCTGAATATATAGGGTGTGTGGAGGGAACGTCG 3176
Query 170 CGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTG 229
||| |||||||||| |||| | |||||| | || ||||| |||||||
Sbjct 3175 GGAAGTGAAACATCTCAGTACCGACAGGAAGA----------GATATTCCGTGAGTAGTG 3126
Query 230 GCGAGCGAAATGGGATGAG 248
|||||||||| |||||||
Sbjct 3125 GCGAGCGAAAGCGGATGAG 3107
>seq9489
Length=379987
Score = 132 bits (146), Expect = 9e-29
Identities = 184/259 (71%), Gaps = 24/259 (9%)
Strand=Plus/Plus
Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60
|| ||||| ||||||||||||||| | || ||| ||||||||| ||||| |||||||
Sbjct 461 AGGGCACAGGGTGGATGCCTTGGCACTAGGAGCCGAAGAAGGACGTGGTAGCCTGCGATA 520
Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120
||| ||||||| |||||| || ||||||| | ||||||||||||| ||||| ||
Sbjct 521 AGCCTCGGGGAGCTGGCAAACGAGCTGTGATCCGAGGGTTTCCGAATGGGGGAACCCCGC 580
Query 121 CCTTTGGGTCATTGCATG----------CTGAATACATA-GGTATGCAAAGCGAACGCGG 169
| | ||||| | || ||||||| ||| ||| || || ||||| |
Sbjct 581 AC---GAGTCATGTCGTGTGACCCGCACCTGAATATATAGGGTGTGTGGAGGGAACGTCG 637
Query 170 CGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTG 229
||| |||||||||| |||| | |||||| | || ||||| |||||||
Sbjct 638 GGAAGTGAAACATCTCAGTACCGACAGGAAGA----------GATATTCCGTGAGTAGTG 687
Query 230 GCGAGCGAAATGGGATGAG 248
|||||||||| |||||||
Sbjct 688 GCGAGCGAAAGCGGATGAG 706
>seq3013
Length=508
Score = 107 bits (118), Expect = 4e-21
Identities = 177/257 (69%), Gaps = 24/257 (9%)
Strand=Plus/Minus
Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60
|| || || ||||||||||||||| | | ||| ||||||||| ||||| |||||||
Sbjct 355 AGAGCGCAGGGTGGATGCCTTGGCACTAGGCGCCGAAGAAGGACGTGGTAGCCTGCGATA 296
Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120
||| ||||||| |||||| || ||||||| | ||||| ||||||| ||||| ||
Sbjct 295 AGCCTCGGGGAGCTGGCAAACGAGCTGTGATCCGAGGGTTTCCAAATGGGGGAACCCCGC 236
Query 121 CCTTTGGGTCATTGCATG----------CTGAATACATA-GGTATGCAAAGCGAACGCGG 169
| | ||||| | || ||||||| ||| ||| || || ||||| |
Sbjct 235 AC---GAGTCATGTCGTGTGACCCGCACCTGAATATATAGGGTGTGTGGAGGGAACGTAG 179
Query 170 CGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTG 229
||| |||||||||| |||| | ||||| | || ||||| |||||||
Sbjct 178 GGAAGTGAAACATCTCAGTACCGACAGGATGA----------GATATTCCGTGAGTAGTG 129
Query 230 GCGAGCGAAATGGGATG 246
||||||||| |||||
Sbjct 128 CCGAGCGAAAGCGGATG 112
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 918312825472
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |