Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq9492 132 9e-29 seq9490 132 9e-29 seq9489 132 9e-29 seq3013 107 4e-21 >seq9492 Length=3813 Score = 132 bits (146), Expect = 9e-29 Identities = 184/259 (71%), Gaps = 24/259 (9%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||||| ||||||||||||||| | || ||| ||||||||| ||||| ||||||| Sbjct 461 AGGGCACAGGGTGGATGCCTTGGCACTAGGAGCCGAAGAAGGACGTGGTAGCCTGCGATA 520 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 ||| ||||||| |||||| || ||||||| | ||||||||||||| ||||| || Sbjct 521 AGCCTCGGGGAGCTGGCAAACGAGCTGTGATCCGAGGGTTTCCGAATGGGGGAACCCCGC 580 Query 121 CCTTTGGGTCATTGCATG----------CTGAATACATA-GGTATGCAAAGCGAACGCGG 169 | | ||||| | || ||||||| ||| ||| || || ||||| | Sbjct 581 AC---GAGTCATGTCGTGTGACCCGCACCTGAATATATAGGGTGTGTGGAGGGAACGTCG 637 Query 170 CGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTG 229 ||| |||||||||| |||| | |||||| | || ||||| ||||||| Sbjct 638 GGAAGTGAAACATCTCAGTACCGACAGGAAGA----------GATATTCCGTGAGTAGTG 687 Query 230 GCGAGCGAAATGGGATGAG 248 |||||||||| ||||||| Sbjct 688 GCGAGCGAAAGCGGATGAG 706 >seq9490 Length=3813 Score = 132 bits (146), Expect = 9e-29 Identities = 184/259 (71%), Gaps = 24/259 (9%) Strand=Plus/Minus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||||| ||||||||||||||| | || ||| ||||||||| ||||| ||||||| Sbjct 3352 AGGGCACAGGGTGGATGCCTTGGCACTAGGAGCCGAAGAAGGACGTGGTAGCCTGCGATA 3293 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 ||| ||||||| |||||| || ||||||| | ||||||||||||| ||||| || Sbjct 3292 AGCCTCGGGGAGCTGGCAAACGAGCTGTGATCCGAGGGTTTCCGAATGGGGGAACCCCGC 3233 Query 121 CCTTTGGGTCATTGCATG----------CTGAATACATA-GGTATGCAAAGCGAACGCGG 169 | | ||||| | || ||||||| ||| ||| || || ||||| | Sbjct 3232 AC---GAGTCATGTCGTGTGACCCGCACCTGAATATATAGGGTGTGTGGAGGGAACGTCG 3176 Query 170 CGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTG 229 ||| |||||||||| |||| | |||||| | || ||||| ||||||| Sbjct 3175 GGAAGTGAAACATCTCAGTACCGACAGGAAGA----------GATATTCCGTGAGTAGTG 3126 Query 230 GCGAGCGAAATGGGATGAG 248 |||||||||| ||||||| Sbjct 3125 GCGAGCGAAAGCGGATGAG 3107 >seq9489 Length=379987 Score = 132 bits (146), Expect = 9e-29 Identities = 184/259 (71%), Gaps = 24/259 (9%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||||| ||||||||||||||| | || ||| ||||||||| ||||| ||||||| Sbjct 461 AGGGCACAGGGTGGATGCCTTGGCACTAGGAGCCGAAGAAGGACGTGGTAGCCTGCGATA 520 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 ||| ||||||| |||||| || ||||||| | ||||||||||||| ||||| || Sbjct 521 AGCCTCGGGGAGCTGGCAAACGAGCTGTGATCCGAGGGTTTCCGAATGGGGGAACCCCGC 580 Query 121 CCTTTGGGTCATTGCATG----------CTGAATACATA-GGTATGCAAAGCGAACGCGG 169 | | ||||| | || ||||||| ||| ||| || || ||||| | Sbjct 581 AC---GAGTCATGTCGTGTGACCCGCACCTGAATATATAGGGTGTGTGGAGGGAACGTCG 637 Query 170 CGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTG 229 ||| |||||||||| |||| | |||||| | || ||||| ||||||| Sbjct 638 GGAAGTGAAACATCTCAGTACCGACAGGAAGA----------GATATTCCGTGAGTAGTG 687 Query 230 GCGAGCGAAATGGGATGAG 248 |||||||||| ||||||| Sbjct 688 GCGAGCGAAAGCGGATGAG 706 >seq3013 Length=508 Score = 107 bits (118), Expect = 4e-21 Identities = 177/257 (69%), Gaps = 24/257 (9%) Strand=Plus/Minus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || || || ||||||||||||||| | | ||| ||||||||| ||||| ||||||| Sbjct 355 AGAGCGCAGGGTGGATGCCTTGGCACTAGGCGCCGAAGAAGGACGTGGTAGCCTGCGATA 296 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 ||| ||||||| |||||| || ||||||| | ||||| ||||||| ||||| || Sbjct 295 AGCCTCGGGGAGCTGGCAAACGAGCTGTGATCCGAGGGTTTCCAAATGGGGGAACCCCGC 236 Query 121 CCTTTGGGTCATTGCATG----------CTGAATACATA-GGTATGCAAAGCGAACGCGG 169 | | ||||| | || ||||||| ||| ||| || || ||||| | Sbjct 235 AC---GAGTCATGTCGTGTGACCCGCACCTGAATATATAGGGTGTGTGGAGGGAACGTAG 179 Query 170 CGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTG 229 ||| |||||||||| |||| | ||||| | || ||||| ||||||| Sbjct 178 GGAAGTGAAACATCTCAGTACCGACAGGATGA----------GATATTCCGTGAGTAGTG 129 Query 230 GCGAGCGAAATGGGATG 246 ||||||||| ||||| Sbjct 128 CCGAGCGAAAGCGGATG 112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918312825472