Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq9492 681 0.0 seq9490 681 0.0 seq9489 681 0.0 seq5631 407 5e-111 >seq9492 Length=3813 Score = 681 bits (754), Expect = 0.0 Identities = 492/564 (87%), Gaps = 7/564 (1%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| ||| |||||| ||||||||||||||||||||||| ||||| |||||||||||| Sbjct 3017 TCGACCTGTCAGTCTCACAGTCAAGCTCCCTTGTGCACTTGCACTCGACACCTGATTGCC 2958 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 |||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||| Sbjct 2957 AACCAGGCTGAGGGAACCTTTGAGCGCCTCCGTTACATTTTAGGAGG-CAACCGCCCCAG 2899 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 |||||||||||||||||||||||||| || ||||| || || |||||||| |||| Sbjct 2898 TTAAACTACCCACCAGGCACTGTCCCTGGTCCGGATCACGGACCGAGGTTAGACATCCGA 2839 Query 181 TACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGT 240 ||| ||||||||||||||||| |||||||| |||| |||| || ||| ||| Sbjct 2838 AGCGGCCAGAGTGGTATTTCAACGTTGACTCCACCCGCACTGGCGTACGGGCTTCACAGT 2779 Query 241 CTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCCC 300 |||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||| Sbjct 2778 CTCCCACCTATCCTACACAAGCCGCACCGAACACCAATACCAAGCTATAGTAAAGGTCCC 2719 Query 301 GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGG 360 ||||||||| |||||||| ||||| |||||||||||||||||||| ||||||||| ||| Sbjct 2718 GGGGTCTTTCCGTCCTGCTGCGCGTAACGAGCATCTTTACTCGTAGTGCAATTTCGCCGA 2659 Query 361 GCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCG 420 | | |||||||||||| | | ||||||||||||||||||||||||||||||||||||| Sbjct 2658 GTTCGCGGTTGAGACAGCGGAGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCG 2599 Query 421 ACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCA 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 2598 ACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTAA 2539 Query 481 ATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGG 540 ||| || |||| | | | | ||| | || |||||||||||||||||||||||| Sbjct 2538 ATTCTGAGCTTCAC-CCCGAAG-GGT----TGACCCGTCCTCTTAACCTTCCAGCACCGG 2485 Query 541 GCAGGCGTCAGTCCGTATACCTCG 564 |||||||||||||||||||| ||| Sbjct 2484 GCAGGCGTCAGTCCGTATACATCG 2461 >seq9490 Length=3813 Score = 681 bits (754), Expect = 0.0 Identities = 492/564 (87%), Gaps = 7/564 (1%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| ||| |||||| ||||||||||||||||||||||| ||||| |||||||||||| Sbjct 796 TCGACCTGTCAGTCTCACAGTCAAGCTCCCTTGTGCACTTGCACTCGACACCTGATTGCC 855 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 |||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||| Sbjct 856 AACCAGGCTGAGGGAACCTTTGAGCGCCTCCGTTACATTTTAGGAGG-CAACCGCCCCAG 914 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 |||||||||||||||||||||||||| || ||||| || || |||||||| |||| Sbjct 915 TTAAACTACCCACCAGGCACTGTCCCTGGTCCGGATCACGGACCGAGGTTAGACATCCGA 974 Query 181 TACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGT 240 ||| ||||||||||||||||| |||||||| |||| |||| || ||| ||| Sbjct 975 AGCGGCCAGAGTGGTATTTCAACGTTGACTCCACCCGCACTGGCGTACGGGCTTCACAGT 1034 Query 241 CTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCCC 300 |||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||| Sbjct 1035 CTCCCACCTATCCTACACAAGCCGCACCGAACACCAATACCAAGCTATAGTAAAGGTCCC 1094 Query 301 GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGG 360 ||||||||| |||||||| ||||| |||||||||||||||||||| ||||||||| ||| Sbjct 1095 GGGGTCTTTCCGTCCTGCTGCGCGTAACGAGCATCTTTACTCGTAGTGCAATTTCGCCGA 1154 Query 361 GCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCG 420 | | |||||||||||| | | ||||||||||||||||||||||||||||||||||||| Sbjct 1155 GTTCGCGGTTGAGACAGCGGAGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCG 1214 Query 421 ACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCA 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1215 ACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTAA 1274 Query 481 ATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGG 540 ||| || |||| | | | | ||| | || |||||||||||||||||||||||| Sbjct 1275 ATTCTGAGCTTCAC-CCCGAAG-GGT----TGACCCGTCCTCTTAACCTTCCAGCACCGG 1328 Query 541 GCAGGCGTCAGTCCGTATACCTCG 564 |||||||||||||||||||| ||| Sbjct 1329 GCAGGCGTCAGTCCGTATACATCG 1352 >seq9489 Length=379987 Score = 681 bits (754), Expect = 0.0 Identities = 492/564 (87%), Gaps = 7/564 (1%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| ||| |||||| ||||||||||||||||||||||| ||||| |||||||||||| Sbjct 3017 TCGACCTGTCAGTCTCACAGTCAAGCTCCCTTGTGCACTTGCACTCGACACCTGATTGCC 2958 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 |||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||| Sbjct 2957 AACCAGGCTGAGGGAACCTTTGAGCGCCTCCGTTACATTTTAGGAGG-CAACCGCCCCAG 2899 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 |||||||||||||||||||||||||| || ||||| || || |||||||| |||| Sbjct 2898 TTAAACTACCCACCAGGCACTGTCCCTGGTCCGGATCACGGACCGAGGTTAGACATCCGA 2839 Query 181 TACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGT 240 ||| ||||||||||||||||| |||||||| |||| |||| || ||| ||| Sbjct 2838 AGCGGCCAGAGTGGTATTTCAACGTTGACTCCACCCGCACTGGCGTACGGGCTTCACAGT 2779 Query 241 CTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCCC 300 |||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||| Sbjct 2778 CTCCCACCTATCCTACACAAGCCGCACCGAACACCAATACCAAGCTATAGTAAAGGTCCC 2719 Query 301 GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGG 360 ||||||||| |||||||| ||||| |||||||||||||||||||| ||||||||| ||| Sbjct 2718 GGGGTCTTTCCGTCCTGCTGCGCGTAACGAGCATCTTTACTCGTAGTGCAATTTCGCCGA 2659 Query 361 GCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCG 420 | | |||||||||||| | | ||||||||||||||||||||||||||||||||||||| Sbjct 2658 GTTCGCGGTTGAGACAGCGGAGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCG 2599 Query 421 ACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCA 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 2598 ACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTAA 2539 Query 481 ATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGG 540 ||| || |||| | | | | ||| | || |||||||||||||||||||||||| Sbjct 2538 ATTCTGAGCTTCAC-CCCGAAG-GGT----TGACCCGTCCTCTTAACCTTCCAGCACCGG 2485 Query 541 GCAGGCGTCAGTCCGTATACCTCG 564 |||||||||||||||||||| ||| Sbjct 2484 GCAGGCGTCAGTCCGTATACATCG 2461 >seq5631 Length=442 Score = 407 bits (450), Expect = 5e-111 Identities = 325/390 (83%), Gaps = 1/390 (0%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| ||| ||| | ||||||||||||||||||||||| ||||| |||||||||||| Sbjct 395 TCGACCTGTCAGTTTTACAGTCAAGCTCCCTTGTGCACTTGCACTCGACACCTGATTGCC 336 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 |||||||||||||||||||||| |||||||| ||||||||| ||||| |||||||||||| Sbjct 335 AACCAGGCTGAGGGAACCTTTGAGCGCCTCCCTTACATTTTAGGAGG-CAACCGCCCCAG 277 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 |||||||||||||||||||||||||| || || || || || |||||||| |||| Sbjct 276 TTAAACTACCCACCAGGCACTGTCCCTGGTCCGGAGCACGGACCGAGGTTAGACATCCGA 217 Query 181 TACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGT 240 ||| ||||||||||||||||| |||||||| |||| |||| |||||| || Sbjct 216 AGCGGCCAGAGTGGTATTTCAACGTTGACTCCACCCGCACTGGCGTACGGGCATCACTGT 157 Query 241 CTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCCC 300 |||||||||||||||||||| ||||| |||| | ||||| ||||||||| ||||||| Sbjct 156 CTCCCACCTATCCTACACAAGCCGCATCGAACACGAATACAAAGCTATAGGACAGGTCCC 97 Query 301 GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGG 360 ||||||||| |||||||| ||| | || |||||| | ||||||| ||||||||| |||| Sbjct 96 GGGGTCTTTCCGTCCTGCTGCGGGTAAAGAGCATGTATACTCGTTGTGCAATTTCGCCGG 37 Query 361 GCCTGTGGTTGAGACAGCAGGGGAGTCGTT 390 | | |||||||||||| ||| ||||||| Sbjct 36 GATCGCGGTTGAGACAGCGGGGAAGTCGTT 7 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702238408192