Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= AAMG01002207.1
Length=564
Score E
Sequences producing significant alignments: (Bits) Value
seq9492 681 0.0
seq9490 681 0.0
seq9489 681 0.0
seq5631 407 5e-111
>seq9492
Length=3813
Score = 681 bits (754), Expect = 0.0
Identities = 492/564 (87%), Gaps = 7/564 (1%)
Strand=Plus/Minus
Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60
||||| ||| |||||| ||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 3017 TCGACCTGTCAGTCTCACAGTCAAGCTCCCTTGTGCACTTGCACTCGACACCTGATTGCC 2958
Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120
|||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||
Sbjct 2957 AACCAGGCTGAGGGAACCTTTGAGCGCCTCCGTTACATTTTAGGAGG-CAACCGCCCCAG 2899
Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180
|||||||||||||||||||||||||| || ||||| || || |||||||| ||||
Sbjct 2898 TTAAACTACCCACCAGGCACTGTCCCTGGTCCGGATCACGGACCGAGGTTAGACATCCGA 2839
Query 181 TACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGT 240
||| ||||||||||||||||| |||||||| |||| |||| || ||| |||
Sbjct 2838 AGCGGCCAGAGTGGTATTTCAACGTTGACTCCACCCGCACTGGCGTACGGGCTTCACAGT 2779
Query 241 CTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCCC 300
|||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||
Sbjct 2778 CTCCCACCTATCCTACACAAGCCGCACCGAACACCAATACCAAGCTATAGTAAAGGTCCC 2719
Query 301 GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGG 360
||||||||| |||||||| ||||| |||||||||||||||||||| ||||||||| |||
Sbjct 2718 GGGGTCTTTCCGTCCTGCTGCGCGTAACGAGCATCTTTACTCGTAGTGCAATTTCGCCGA 2659
Query 361 GCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCG 420
| | |||||||||||| | | |||||||||||||||||||||||||||||||||||||
Sbjct 2658 GTTCGCGGTTGAGACAGCGGAGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCG 2599
Query 421 ACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCA 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2598 ACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTAA 2539
Query 481 ATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGG 540
||| || |||| | | | | ||| | || ||||||||||||||||||||||||
Sbjct 2538 ATTCTGAGCTTCAC-CCCGAAG-GGT----TGACCCGTCCTCTTAACCTTCCAGCACCGG 2485
Query 541 GCAGGCGTCAGTCCGTATACCTCG 564
|||||||||||||||||||| |||
Sbjct 2484 GCAGGCGTCAGTCCGTATACATCG 2461
>seq9490
Length=3813
Score = 681 bits (754), Expect = 0.0
Identities = 492/564 (87%), Gaps = 7/564 (1%)
Strand=Plus/Plus
Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60
||||| ||| |||||| ||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 796 TCGACCTGTCAGTCTCACAGTCAAGCTCCCTTGTGCACTTGCACTCGACACCTGATTGCC 855
Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120
|||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||
Sbjct 856 AACCAGGCTGAGGGAACCTTTGAGCGCCTCCGTTACATTTTAGGAGG-CAACCGCCCCAG 914
Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180
|||||||||||||||||||||||||| || ||||| || || |||||||| ||||
Sbjct 915 TTAAACTACCCACCAGGCACTGTCCCTGGTCCGGATCACGGACCGAGGTTAGACATCCGA 974
Query 181 TACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGT 240
||| ||||||||||||||||| |||||||| |||| |||| || ||| |||
Sbjct 975 AGCGGCCAGAGTGGTATTTCAACGTTGACTCCACCCGCACTGGCGTACGGGCTTCACAGT 1034
Query 241 CTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCCC 300
|||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||
Sbjct 1035 CTCCCACCTATCCTACACAAGCCGCACCGAACACCAATACCAAGCTATAGTAAAGGTCCC 1094
Query 301 GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGG 360
||||||||| |||||||| ||||| |||||||||||||||||||| ||||||||| |||
Sbjct 1095 GGGGTCTTTCCGTCCTGCTGCGCGTAACGAGCATCTTTACTCGTAGTGCAATTTCGCCGA 1154
Query 361 GCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCG 420
| | |||||||||||| | | |||||||||||||||||||||||||||||||||||||
Sbjct 1155 GTTCGCGGTTGAGACAGCGGAGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCG 1214
Query 421 ACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCA 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1215 ACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTAA 1274
Query 481 ATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGG 540
||| || |||| | | | | ||| | || ||||||||||||||||||||||||
Sbjct 1275 ATTCTGAGCTTCAC-CCCGAAG-GGT----TGACCCGTCCTCTTAACCTTCCAGCACCGG 1328
Query 541 GCAGGCGTCAGTCCGTATACCTCG 564
|||||||||||||||||||| |||
Sbjct 1329 GCAGGCGTCAGTCCGTATACATCG 1352
>seq9489
Length=379987
Score = 681 bits (754), Expect = 0.0
Identities = 492/564 (87%), Gaps = 7/564 (1%)
Strand=Plus/Minus
Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60
||||| ||| |||||| ||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 3017 TCGACCTGTCAGTCTCACAGTCAAGCTCCCTTGTGCACTTGCACTCGACACCTGATTGCC 2958
Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120
|||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||
Sbjct 2957 AACCAGGCTGAGGGAACCTTTGAGCGCCTCCGTTACATTTTAGGAGG-CAACCGCCCCAG 2899
Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180
|||||||||||||||||||||||||| || ||||| || || |||||||| ||||
Sbjct 2898 TTAAACTACCCACCAGGCACTGTCCCTGGTCCGGATCACGGACCGAGGTTAGACATCCGA 2839
Query 181 TACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGT 240
||| ||||||||||||||||| |||||||| |||| |||| || ||| |||
Sbjct 2838 AGCGGCCAGAGTGGTATTTCAACGTTGACTCCACCCGCACTGGCGTACGGGCTTCACAGT 2779
Query 241 CTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCCC 300
|||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||
Sbjct 2778 CTCCCACCTATCCTACACAAGCCGCACCGAACACCAATACCAAGCTATAGTAAAGGTCCC 2719
Query 301 GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGG 360
||||||||| |||||||| ||||| |||||||||||||||||||| ||||||||| |||
Sbjct 2718 GGGGTCTTTCCGTCCTGCTGCGCGTAACGAGCATCTTTACTCGTAGTGCAATTTCGCCGA 2659
Query 361 GCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCG 420
| | |||||||||||| | | |||||||||||||||||||||||||||||||||||||
Sbjct 2658 GTTCGCGGTTGAGACAGCGGAGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCG 2599
Query 421 ACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCA 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2598 ACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTAA 2539
Query 481 ATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGG 540
||| || |||| | | | | ||| | || ||||||||||||||||||||||||
Sbjct 2538 ATTCTGAGCTTCAC-CCCGAAG-GGT----TGACCCGTCCTCTTAACCTTCCAGCACCGG 2485
Query 541 GCAGGCGTCAGTCCGTATACCTCG 564
|||||||||||||||||||| |||
Sbjct 2484 GCAGGCGTCAGTCCGTATACATCG 2461
>seq5631
Length=442
Score = 407 bits (450), Expect = 5e-111
Identities = 325/390 (83%), Gaps = 1/390 (0%)
Strand=Plus/Minus
Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60
||||| ||| ||| | ||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 395 TCGACCTGTCAGTTTTACAGTCAAGCTCCCTTGTGCACTTGCACTCGACACCTGATTGCC 336
Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120
|||||||||||||||||||||| |||||||| ||||||||| ||||| ||||||||||||
Sbjct 335 AACCAGGCTGAGGGAACCTTTGAGCGCCTCCCTTACATTTTAGGAGG-CAACCGCCCCAG 277
Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180
|||||||||||||||||||||||||| || || || || || |||||||| ||||
Sbjct 276 TTAAACTACCCACCAGGCACTGTCCCTGGTCCGGAGCACGGACCGAGGTTAGACATCCGA 217
Query 181 TACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGT 240
||| ||||||||||||||||| |||||||| |||| |||| |||||| ||
Sbjct 216 AGCGGCCAGAGTGGTATTTCAACGTTGACTCCACCCGCACTGGCGTACGGGCATCACTGT 157
Query 241 CTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCCC 300
|||||||||||||||||||| ||||| |||| | ||||| ||||||||| |||||||
Sbjct 156 CTCCCACCTATCCTACACAAGCCGCATCGAACACGAATACAAAGCTATAGGACAGGTCCC 97
Query 301 GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGG 360
||||||||| |||||||| ||| | || |||||| | ||||||| ||||||||| ||||
Sbjct 96 GGGGTCTTTCCGTCCTGCTGCGGGTAAAGAGCATGTATACTCGTTGTGCAATTTCGCCGG 37
Query 361 GCCTGTGGTTGAGACAGCAGGGGAGTCGTT 390
| | |||||||||||| ||| |||||||
Sbjct 36 GATCGCGGTTGAGACAGCGGGGAAGTCGTT 7
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1702238408192
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