Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq124 733 0.0 seq4484 360 6e-97 seq7144 230 7e-58 seq4208 228 2e-57 seq4846 158 4e-36 seq6844 105 2e-20 seq3471 96.9 1e-17 seq8724 91.5 4e-16 >seq124 Length=51484 Score = 733 bits (812), Expect = 0.0 Identities = 471/508 (93%), Gaps = 6/508 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||| || | |||||||||| |||||||||||||||||| Sbjct 1195 GTACTCATTCCAATTACAAGACCCGAATGGGCCCTGTATCGTTATTTATTGTCACTACCT 1254 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| | | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1255 CCCTGAATTAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 1314 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct 1315 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGAAACCATGGTA 1374 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1375 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCAGCA 1434 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||||||||||||| |||||||||||||||| ||| ||| ||||| | | ||| | Sbjct 1435 CAAGGCCATGCGATTCGAAAAGTTATTATGAATCATCAAAGAG-TCCGAA-GACATTGAT 1492 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAA--GTCGGGGTTTTTAGCATGTATTAGCTCT 358 ||||||||||||||||||| | ||||| || |||| | |||| |||||||||||||||| Sbjct 1493 TTTTTATCTAATAAATACATCTCTTCCAAAGGGTCGAGATTTTAAGCATGTATTAGCTCT 1552 Query 359 AGAATTACCACGGTTAT-CCATGTAGT-AAGGTACTATCAAATAAACGATAACTGATTTA 416 ||||||||||| ||||| ||||||||| |||| ||||||||||||||||||||||||||| Sbjct 1553 AGAATTACCACAGTTATACCATGTAGTAAAGGAACTATCAAATAAACGATAACTGATTTA 1612 Query 417 ATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATC 476 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1613 ATGAGCCATTCGCAGTTTCACTGTATAAATTGCTTATACTTAGACATGCATGGCTTAATC 1672 Query 477 TTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||| Sbjct 1673 TTTGAGACAAGCATATGACTACTGGCAG 1700 >seq4484 Length=457 Score = 360 bits (398), Expect = 6e-97 Identities = 234/257 (91%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||| || | |||||||||| |||||||||||||||||| Sbjct 155 GTACTCATTCCAATTACAAGACCCGAATGTGCCCTGTATCGTTATTTATTGTCACTACCT 214 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| | | ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 215 CCCTGGATTAGGATTGGGTAAGTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 274 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||| ||| |||||||| ||||||||||||||||||| ||||||||| Sbjct 275 TCTCAGGCTCCCTCTCCTGAACCGAACCCTTATTCCCCGTTACCCGTTGAAACCATGGTA 334 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| ||||||||||||||||||||| |||| || |||||||||||||||||||| || Sbjct 335 GGCCCCTATCCTACCATCGAAAGTTGCTAGGTCATCAATTTGAATGAACCATCGCCCGCA 394 Query 241 CAAGGCCATGCGATTCG 257 |||||| |||||||||| Sbjct 395 CAAGGCGATGCGATTCG 411 >seq7144 Length=430 Score = 230 bits (254), Expect = 7e-58 Identities = 158/176 (90%), Gaps = 2/176 (1%) Strand=Plus/Minus Query 331 GTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTAT-CCATGTAGTAA-GG 388 |||| | ||| |||||||||||||||||||| | ||| ||||| ||| |||||| || Sbjct 425 GTCGAGACTTTAAGCATGTATTAGCTCTAGAACTGACACAGTTATACCAGTTAGTAAAGG 366 Query 389 TACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTG 448 |||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||| Sbjct 365 AACTATCAAATAAACGATAACTGCTTTAATTAGCCATTCGCAGTTTCACTGTATAAATTG 306 Query 449 CTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 || ||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 305 CTGATACTTAGACATGCATGGCTTAATCTTTGAGACTAGCATATGACTACTGGCAG 250 >seq4208 Length=462 Score = 228 bits (252), Expect = 2e-57 Identities = 253/335 (76%), Gaps = 2/335 (1%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||||| |||| || |||| |||| |||||||| ||||||||| Sbjct 436 GTACTCATTCCAATTACAATACCCTAATTTTCCCTTTATCTTTATTTATTTTCACTACCT 377 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| | |||| ||||||| | | |||||| |||||||| || || || || || Sbjct 376 CCCTTAATTATGATTTTGTAATTTTCTCTCCTGCTTCCTTCCTTTTATTTGTTATCCTTT 317 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||| |||||||||| |||| |||||| ||||||| |||||| || | ||||| || Sbjct 316 TCTCATTCTCCCTCTCCTTAATCTAACCCTTATTCCCCTTTACCCTTTTAAACCATTTTA 257 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||||||||||||||| ||| || ||| || |||||| ||| |||| || || | Sbjct 256 TTCCACTATCCTACCATCTAAATTTTATATTTCATAAATTTTAATTAACCTTCTCCATCA 197 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||| |||| |||||| || ||||||| |||| ||| | ||||| | | || | Sbjct 196 CAATTCCATTCGATTCTAAAATTTATTATTAATCGTCAAATA-TTCCGAA-GACATTTAT 139 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGG 335 ||||||||||||||||||| | ||||| | |||| Sbjct 138 TTTTTATCTAATAAATACATCTCTTCCAAGATCGG 104 >seq4846 Length=451 Score = 158 bits (174), Expect = 4e-36 Identities = 108/122 (89%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 109 GTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTT 168 ||||||| || ||||||||||||||||||||||||||||||| || |||||||||||| | Sbjct 2 GTGGTAGACGCTTCTCAGGCTCCCTCTCCGGAATCGAACCCTTATGCCCCGTTACCCGAT 61 Query 169 GATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAA 228 | |||||||||||||| ||||||||||||||||||| |||| ||||||||||| || Sbjct 62 AAAGCCATGGTAGGCCACAATCCTACCATCGAAAGTTGGTAGGAAAGAAATTTGAAAGAC 121 Query 229 CC 230 || Sbjct 122 CC 123 >seq6844 Length=432 Score = 105 bits (116), Expect = 2e-20 Identities = 61/63 (97%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 442 TAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGG 501 || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1 TAAATTGCTTATACTTAGACATGCATGGCTTAATTTTTGAGACAAGCATATGACTACTGG 60 Query 502 CAG 504 ||| Sbjct 61 CAG 63 >seq3471 Length=478 Score = 96.9 bits (106), Expect = 1e-17 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 ||||||||||||||||||||||||||||||| |||||||||||||||||||||| || | Sbjct 402 GCCACTATCCTACCATCGAAAGTTGATAGGGAAGAAATTTGAATGAACCATCGCAAGCAC 461 Query 242 AAGGCCATGCGATTCG 257 || | | ||| |||| Sbjct 462 CAGACAAGGCGGTTCG 477 >seq8724 Length=245 Score = 91.5 bits (100), Expect = 4e-16 Identities = 50/50 (100%), Gaps = 0/50 (0%) Strand=Plus/Minus Query 455 CTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 245 CTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510256632832