Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq124 733 0.0
seq4484 360 6e-97
seq7144 230 7e-58
seq4208 228 2e-57
seq4846 158 4e-36
seq6844 105 2e-20
seq3471 96.9 1e-17
seq8724 91.5 4e-16
>seq124
Length=51484
Score = 733 bits (812), Expect = 0.0
Identities = 471/508 (93%), Gaps = 6/508 (1%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|||||||||||||||||||||||| || | |||||||||| ||||||||||||||||||
Sbjct 1195 GTACTCATTCCAATTACAAGACCCGAATGGGCCCTGTATCGTTATTTATTGTCACTACCT 1254
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1255 CCCTGAATTAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 1314
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
|||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct 1315 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGAAACCATGGTA 1374
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1375 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCAGCA 1434
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
||||||||||||||||| |||||||||||||||| ||| ||| ||||| | | ||| |
Sbjct 1435 CAAGGCCATGCGATTCGAAAAGTTATTATGAATCATCAAAGAG-TCCGAA-GACATTGAT 1492
Query 301 TTTTTATCTAATAAATACACCCCTTCCGAA--GTCGGGGTTTTTAGCATGTATTAGCTCT 358
||||||||||||||||||| | ||||| || |||| | |||| ||||||||||||||||
Sbjct 1493 TTTTTATCTAATAAATACATCTCTTCCAAAGGGTCGAGATTTTAAGCATGTATTAGCTCT 1552
Query 359 AGAATTACCACGGTTAT-CCATGTAGT-AAGGTACTATCAAATAAACGATAACTGATTTA 416
||||||||||| ||||| ||||||||| |||| |||||||||||||||||||||||||||
Sbjct 1553 AGAATTACCACAGTTATACCATGTAGTAAAGGAACTATCAAATAAACGATAACTGATTTA 1612
Query 417 ATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATC 476
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1613 ATGAGCCATTCGCAGTTTCACTGTATAAATTGCTTATACTTAGACATGCATGGCTTAATC 1672
Query 477 TTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||||
Sbjct 1673 TTTGAGACAAGCATATGACTACTGGCAG 1700
>seq4484
Length=457
Score = 360 bits (398), Expect = 6e-97
Identities = 234/257 (91%), Gaps = 0/257 (0%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|||||||||||||||||||||||| || | |||||||||| ||||||||||||||||||
Sbjct 155 GTACTCATTCCAATTACAAGACCCGAATGTGCCCTGTATCGTTATTTATTGTCACTACCT 214
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||| | | ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 215 CCCTGGATTAGGATTGGGTAAGTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 274
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||| ||| |||||||| ||||||||||||||||||| |||||||||
Sbjct 275 TCTCAGGCTCCCTCTCCTGAACCGAACCCTTATTCCCCGTTACCCGTTGAAACCATGGTA 334
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||| ||||||||||||||||||||| |||| || |||||||||||||||||||| ||
Sbjct 335 GGCCCCTATCCTACCATCGAAAGTTGCTAGGTCATCAATTTGAATGAACCATCGCCCGCA 394
Query 241 CAAGGCCATGCGATTCG 257
|||||| ||||||||||
Sbjct 395 CAAGGCGATGCGATTCG 411
>seq7144
Length=430
Score = 230 bits (254), Expect = 7e-58
Identities = 158/176 (90%), Gaps = 2/176 (1%)
Strand=Plus/Minus
Query 331 GTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTAT-CCATGTAGTAA-GG 388
|||| | ||| |||||||||||||||||||| | ||| ||||| ||| |||||| ||
Sbjct 425 GTCGAGACTTTAAGCATGTATTAGCTCTAGAACTGACACAGTTATACCAGTTAGTAAAGG 366
Query 389 TACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTG 448
|||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||
Sbjct 365 AACTATCAAATAAACGATAACTGCTTTAATTAGCCATTCGCAGTTTCACTGTATAAATTG 306
Query 449 CTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|| ||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 305 CTGATACTTAGACATGCATGGCTTAATCTTTGAGACTAGCATATGACTACTGGCAG 250
>seq4208
Length=462
Score = 228 bits (252), Expect = 2e-57
Identities = 253/335 (76%), Gaps = 2/335 (1%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||||| |||| || |||| |||| |||||||| |||||||||
Sbjct 436 GTACTCATTCCAATTACAATACCCTAATTTTCCCTTTATCTTTATTTATTTTCACTACCT 377
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||| | |||| ||||||| | | |||||| |||||||| || || || || ||
Sbjct 376 CCCTTAATTATGATTTTGTAATTTTCTCTCCTGCTTCCTTCCTTTTATTTGTTATCCTTT 317
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||| |||||||||| |||| |||||| ||||||| |||||| || | ||||| ||
Sbjct 316 TCTCATTCTCCCTCTCCTTAATCTAACCCTTATTCCCCTTTACCCTTTTAAACCATTTTA 257
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||||||||||||||| ||| || ||| || |||||| ||| |||| || || |
Sbjct 256 TTCCACTATCCTACCATCTAAATTTTATATTTCATAAATTTTAATTAACCTTCTCCATCA 197
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
||| |||| |||||| || ||||||| |||| ||| | ||||| | | || |
Sbjct 196 CAATTCCATTCGATTCTAAAATTTATTATTAATCGTCAAATA-TTCCGAA-GACATTTAT 139
Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGG 335
||||||||||||||||||| | ||||| | ||||
Sbjct 138 TTTTTATCTAATAAATACATCTCTTCCAAGATCGG 104
>seq4846
Length=451
Score = 158 bits (174), Expect = 4e-36
Identities = 108/122 (89%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 109 GTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTT 168
||||||| || ||||||||||||||||||||||||||||||| || |||||||||||| |
Sbjct 2 GTGGTAGACGCTTCTCAGGCTCCCTCTCCGGAATCGAACCCTTATGCCCCGTTACCCGAT 61
Query 169 GATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAA 228
| |||||||||||||| ||||||||||||||||||| |||| ||||||||||| ||
Sbjct 62 AAAGCCATGGTAGGCCACAATCCTACCATCGAAAGTTGGTAGGAAAGAAATTTGAAAGAC 121
Query 229 CC 230
||
Sbjct 122 CC 123
>seq6844
Length=432
Score = 105 bits (116), Expect = 2e-20
Identities = 61/63 (97%), Gaps = 0/63 (0%)
Strand=Plus/Plus
Query 442 TAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGG 501
|| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1 TAAATTGCTTATACTTAGACATGCATGGCTTAATTTTTGAGACAAGCATATGACTACTGG 60
Query 502 CAG 504
|||
Sbjct 61 CAG 63
>seq3471
Length=478
Score = 96.9 bits (106), Expect = 1e-17
Identities = 67/76 (88%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241
||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |
Sbjct 402 GCCACTATCCTACCATCGAAAGTTGATAGGGAAGAAATTTGAATGAACCATCGCAAGCAC 461
Query 242 AAGGCCATGCGATTCG 257
|| | | ||| ||||
Sbjct 462 CAGACAAGGCGGTTCG 477
>seq8724
Length=245
Score = 91.5 bits (100), Expect = 4e-16
Identities = 50/50 (100%), Gaps = 0/50 (0%)
Strand=Plus/Minus
Query 455 CTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 245 CTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 196
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510256632832
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |