Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_009552.2 Length=40863 Score E Sequences producing significant alignments: (Bits) Value seq13 205 2e-48 >seq13 Length=283376 Score = 205 bits (226), Expect = 2e-48 Identities = 493/739 (67%), Gaps = 13/739 (2%) Strand=Plus/Plus Query 37709 GACCGAACGGGCGTCGGCACGCTGTCGGTGTTCGGCCGCCAGCTCCGCTTCAACTTACAA 37768 ||||| ||||| ||||||| |||||||||||||||||||||||| || | Sbjct 138395 GACCGCACGGGGACGGGCACGCGCAGCGTGTTCGGCCGCCAGCTCCGCTTCGACCTCGCG 138454 Query 37769 GATGGATTTCCGCTCGTGACAACGAAAAAATTGCATATCCGCTCCATCATTTATGAACTG 37828 | || || |||||| | || ||||| |||| || ||| || || || ||| Sbjct 138455 CAGGGCTTCCCGCTCATCACGACGAAGCGCGTGCACCTCAAGTCCGTCGCCTACGAGCTG 138514 Query 37829 CTTTGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTGCAGGAGAATGGCGTGACGATT 37888 || ||||| | ||||| ||||||| |||| | |||||| |||||| || Sbjct 138515 CTGTGGTTCCTGCGCGGCGACTCGAACGTGCGCTGGCTCCAGGAGCGCGGCGTGCGCATC 138574 Query 37889 TGGGATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCGATTTACGGCGCGCAATGGCGC 37948 ||||| |||||||| |||| ||||||| |||||||| | ||||||| || |||||| Sbjct 138575 TGGGACGAGTGGGCCGACGCCGACGGCGAGCTCGGCCCCGTCTACGGCGTCCAGTGGCGC 138634 Query 37949 TCGTGGAAGGGAGCAGACGGGAAAACCATCGACCAGATCGCATGGGTTGTCGAAGAGATC 38008 |||||| | | ||||| | |||||||| |||| ||| |||| ||||| Sbjct 138635 TCGTGGCCGACGCCGGACGGCCGCCACGTCGACCAGGTCGCGCAGGTGATCGAGCAGATC 138694 Query 38009 A-AACGAAATCCGCATTCACGCCGGCTGCTGGTGAGCGCTTGGAATGTAGCAGAATTGGA 38067 | |||| ||| | || || |||| | || ||| ||||| || | || | || Sbjct 138695 AGGGCGAACCCCG-ACTCGCGACGGCACATCGTCTCCGCGTGGAACGTCGGGGAGATCGA 138753 Query 38068 CGAGATGAAGCTGCCGCCGTGTCATTACGC---CTTTCAGTTCTATGTCGCCAACGGCCG 38124 || ||| |||||||||||| | |||| ||| |||||||| || ||| ||||||| Sbjct 138754 GGACATGGCGCTGCCGCCGTGCC---ACGCGTTCTTCCAGTTCTACGTGGCCGACGGCCG 138810 Query 38125 GTTGTCATGCATGTGGCAGCAGCGCTCCGTTGATACGTTTTTAGGGTTGCCGTTTAACAT 38184 | | || ||| | | |||||||| | || || | ||| ||||||| ||||| Sbjct 138811 GCTCTCGTGCCAGCTCTACCAGCGCTCGGCGGACCTCTTCCTCGGGGTGCCGTTCAACAT 138870 Query 38185 CGCGAGCTACGCGCTGTTGACGCATATGGTAGCCCAACAATGCGACTTGGATGTCGGTGA 38244 |||| ||||||||| | || ||||| ||| || || | | || ||||| || Sbjct 138871 CGCGTCGTACGCGCTGCTCGTCCACATGGTCGCCGCGCAGACCGGCCTCGAGGTCGGCGA 138930 Query 38245 ACTCATTTTCACCGGCGGCGACGTCCATTTGTACAAAAATCATCTGGAACAAGCGAAACT 38304 || | | ||||| |||||||| || | ||| | || || | || || | | Sbjct 138931 CTTCGTGTGGACCGGAGGCGACGTGCACATCTACGACAACCACGTCGAGCAGGTGCGCGA 138990 Query 38305 GCAGCTGACGCGCGAGCCGCGCCCGCTGCCGAAGCTTGTGCTGAAACGGAAGCCGC-CGT 38363 |||||| |||||||||||| |||| |||| || ||| | || |||| | Sbjct 138991 GCAGCTCACGCGCGAGCCGTACCCGTACCCGACGC---TGC-GCCTCGCGCCCCGCGACT 139046 Query 38364 CTATCTTTGACTATGAATACGACGACTTTGAAATCGTCGGCTACGATCCGCATCCGGCGA 38423 | ||| | ||| || ||||| ||| | || ||||||| ||| | | || ||| ||| Sbjct 139047 CGATCGACGCCTACGAGTACGAGGACATCGAGGTCGTCGGGTACCAGCACCACCCGACGA 139106 Query 38424 TTAAAGCACCGGTGGCGGT 38442 | || || ||| | ||||| Sbjct 139107 TCAAGGCGCCGATCGCGGT 139125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130625274585800