Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_016654.1 Length=39474 Score E Sequences producing significant alignments: (Bits) Value seq1 269 7e-68 >seq1 Length=1297082 Score = 269 bits (298), Expect = 7e-68 Identities = 274/354 (77%), Gaps = 6/354 (2%) Strand=Plus/Plus Query 12160 GGCCATCGCATGACTGACACCCTGATCACCATCATCGGCAACCTGGTGGCGGACCCCGAG 12219 |||||| ||| | ||||||| | ||||| | ||||| ||||| || ||||| ||| Sbjct 1125006 GGCCATGGCAGG--TGACACCGTCATCACGGTGATCGGGAACCTCACGGGAGACCCGGAG 1125063 Query 12220 TTGCGGTTCACGCCGGCCGGTGCTGCCGTCGCCAACTTCACCGTCGCGTCCACGCCGCGC 12279 |||| ||||| || | ||||| || || ||||||||||| || |||||||||||||| Sbjct 1125064 CTGCGTTTCACCCCCTCGGGTGCGGCGGTGGCCAACTTCACGGTGGCGTCCACGCCGCGG 1125123 Query 12280 ACGTTCGACAAGCAGGCGAACGAGTGGAAGGACGGGGAGGCGCTGTTCATGCGCTGCCAG 12339 || |||||| ||| |||||||||||||||||||||| | ||||||||||||||| | Sbjct 1125124 ACCTTCGACCGCCAGTCGAACGAGTGGAAGGACGGGGACACCCTGTTCATGCGCTGCTCG 1125183 Query 12340 GTGTGGCGTGAGGCCGCCGAGAACGTCGCCGAGAGCTTGTCGCGGGGCTCGCGGGTCATC 12399 | ||||| |||||||| ||||||||||| ||| || || |||| ||| |||||| Sbjct 1125184 ATCTGGCGCGAGGCCGCGGAGAACGTCGCGGAGTCGCTGACGAAGGGCATGCGCGTCATC 1125243 Query 12400 GTCACCGGCAAGCTCAAGTCC--CGCACCTTCGAGACGCGTGAGGGGGAGAAGCGGACCG 12457 || ||| ||| |||| ||| | | |||||| || |||||||||||||| |||| Sbjct 1125244 GTGCAGGGCCGCCTC--GTCCAGCGCTCGTACGAGACCCGCGAGGGGGAGAAGCGCACCG 1125301 Query 12458 TCATCGAACTGGAGGTCGACGAGATCGGCCCCAGCCTCCGCTACGCCACCGCCA 12511 || |||| ||| |||| ||||||||||| ||| ||| ||||||||| | |||| Sbjct 1125302 TCGTCGAGCTGCAGGTGGACGAGATCGGTCCCTCCCTGCGCTACGCCTCTGCCA 1125355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126180975592544