Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= NC_031120.1
Length=241147
Score E
Sequences producing significant alignments: (Bits) Value
seq13 96.9 5e-15
seq6689 93.3 7e-14
>seq13
Length=283376
Score = 96.9 bits (106), Expect = 5e-15
Identities = 153/217 (71%), Gaps = 8/217 (4%)
Strand=Plus/Plus
Query 196781 TCTTGTCAGCTGTATCAGCGTAGTGCGGATATGTTCCTCGGTGTACCGTTCAACATCGCG 196840
|| || ||||| || ||||| ||||| | |||||||| || |||||||||||||||
Sbjct 138815 TCGTGCCAGCTCTACCAGCGCTCGGCGGACCTCTTCCTCGGGGTGCCGTTCAACATCGCG 138874
Query 196841 TCTTACGCATTGCTGATTCACATGGT---GGCGCA-ACAGGTTAACATGGTACCGGGCGA 196896
|| ||||| |||| | |||||||| ||||| || || | | | |||||
Sbjct 138875 TCGTACGCGCTGCTCGTCCACATGGTCGCCGCGCAGACCGG----CCTCGAGGTCGGCGA 138930
Query 196897 GTTCGTTTGGACTGGCGGTGACGTCCACATCTACTCCAATCACATGGAACAGGTAGAAGA 196956
||||| ||||| || || ||||| ||||||||| ||| ||| | || ||||| ||
Sbjct 138931 CTTCGTGTGGACCGGAGGCGACGTGCACATCTACGACAACCACGTCGAGCAGGTGCGCGA 138990
Query 196957 ACAGCTGTCTCGTAAACCGAAAGCGTTGCCGACGCTG 196993
||||| | || | ||| | ||| |||||||||
Sbjct 138991 GCAGCTCACGCGCGAGCCGTACCCGTACCCGACGCTG 139027
>seq6689
Length=433
Score = 93.3 bits (102), Expect = 7e-14
Identities = 152/217 (70%), Gaps = 8/217 (4%)
Strand=Plus/Plus
Query 196781 TCTTGTCAGCTGTATCAGCGTAGTGCGGATATGTTCCTCGGTGTACCGTTCAACATCGCG 196840
|| || ||||| || ||||| ||||| | |||||||| || |||||||||||||||
Sbjct 174 TCGTGCCAGCTCTACCAGCGCTCGGCGGACCTCTTCCTCGGGGTGCCGTTCAACATCGCG 233
Query 196841 TCTTACGCATTGCTGATTCACATGGTGG---CGCA-ACAGGTTAACATGGTACCGGGCGA 196896
|| ||||| |||| | |||||||| | |||| || || | | | |||||
Sbjct 234 TCGTACGCGCTGCTCGTCCACATGGTCGCCTCGCAGACCGG----CCTCGAGGTCGGCGA 289
Query 196897 GTTCGTTTGGACTGGCGGTGACGTCCACATCTACTCCAATCACATGGAACAGGTAGAAGA 196956
||||| ||||| || || ||||| ||||||||| ||| ||| | || ||||| ||
Sbjct 290 CTTCGTGTGGACCGGAGGCGACGTGCACATCTACGACAACCACGTCGAGCAGGTGCGCGA 349
Query 196957 ACAGCTGTCTCGTAAACCGAAAGCGTTGCCGACGCTG 196993
||||| | | | ||| | ||| |||||||||
Sbjct 350 GCAGCTCACGGGCGAGCCGTACCCGTACCCGACGCTG 386
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 771450856494240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |