Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_031120.1 Length=241147 Score E Sequences producing significant alignments: (Bits) Value seq13 96.9 5e-15 seq6689 93.3 7e-14 >seq13 Length=283376 Score = 96.9 bits (106), Expect = 5e-15 Identities = 153/217 (71%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 196781 TCTTGTCAGCTGTATCAGCGTAGTGCGGATATGTTCCTCGGTGTACCGTTCAACATCGCG 196840 || || ||||| || ||||| ||||| | |||||||| || ||||||||||||||| Sbjct 138815 TCGTGCCAGCTCTACCAGCGCTCGGCGGACCTCTTCCTCGGGGTGCCGTTCAACATCGCG 138874 Query 196841 TCTTACGCATTGCTGATTCACATGGT---GGCGCA-ACAGGTTAACATGGTACCGGGCGA 196896 || ||||| |||| | |||||||| ||||| || || | | | ||||| Sbjct 138875 TCGTACGCGCTGCTCGTCCACATGGTCGCCGCGCAGACCGG----CCTCGAGGTCGGCGA 138930 Query 196897 GTTCGTTTGGACTGGCGGTGACGTCCACATCTACTCCAATCACATGGAACAGGTAGAAGA 196956 ||||| ||||| || || ||||| ||||||||| ||| ||| | || ||||| || Sbjct 138931 CTTCGTGTGGACCGGAGGCGACGTGCACATCTACGACAACCACGTCGAGCAGGTGCGCGA 138990 Query 196957 ACAGCTGTCTCGTAAACCGAAAGCGTTGCCGACGCTG 196993 ||||| | || | ||| | ||| ||||||||| Sbjct 138991 GCAGCTCACGCGCGAGCCGTACCCGTACCCGACGCTG 139027 >seq6689 Length=433 Score = 93.3 bits (102), Expect = 7e-14 Identities = 152/217 (70%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 196781 TCTTGTCAGCTGTATCAGCGTAGTGCGGATATGTTCCTCGGTGTACCGTTCAACATCGCG 196840 || || ||||| || ||||| ||||| | |||||||| || ||||||||||||||| Sbjct 174 TCGTGCCAGCTCTACCAGCGCTCGGCGGACCTCTTCCTCGGGGTGCCGTTCAACATCGCG 233 Query 196841 TCTTACGCATTGCTGATTCACATGGTGG---CGCA-ACAGGTTAACATGGTACCGGGCGA 196896 || ||||| |||| | |||||||| | |||| || || | | | ||||| Sbjct 234 TCGTACGCGCTGCTCGTCCACATGGTCGCCTCGCAGACCGG----CCTCGAGGTCGGCGA 289 Query 196897 GTTCGTTTGGACTGGCGGTGACGTCCACATCTACTCCAATCACATGGAACAGGTAGAAGA 196956 ||||| ||||| || || ||||| ||||||||| ||| ||| | || ||||| || Sbjct 290 CTTCGTGTGGACCGGAGGCGACGTGCACATCTACGACAACCACGTCGAGCAGGTGCGCGA 349 Query 196957 ACAGCTGTCTCGTAAACCGAAAGCGTTGCCGACGCTG 196993 ||||| | | | ||| | ||| ||||||||| Sbjct 350 GCAGCTCACGGGCGAGCCGTACCCGTACCCGACGCTG 386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 771450856494240