Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001640265.1_202016- 05-08] 1,098 sequences; 22,339,351 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq599 143 5e-32 >seq599 Length=805 Score = 143 bits (158), Expect = 5e-32 Identities = 200/270 (74%), Gaps = 18/270 (7%) Strand=Plus/Minus Query 1 TAGCCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCC 60 || |||| | ||||| ||||||||| |||||| ||| | |||||||| | || |||||| Sbjct 276 TACCCCGGG-AGGGGAGTGAAATAGTACCTGAAACCGTGTGCCTACAATCCGTTGGAGCC 218 Query 61 GAGT--GATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCA 118 | | | |||||| |||||||||||| | ||||||||| ||||||||| ||| Sbjct 217 TCCTTGGCTGGGGTGACAGCGTGCCTTTTGAAGAATGAGCCTGCGAGTTAGTGCTCAGTG 158 Query 119 GCGAGGTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGAC- 177 |||||||||| | | || | ||||| || ||||||||| | ||||||||| | Sbjct 157 GCGAGGTTAA-CCCGTGTGG---GGAAGCCGTAGCGAAAGCGAGTCCGAACAGGGCGCCC 102 Query 178 -GAGTTGGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGC- 235 ||| | ||| |||||| |||| | |||||||| ||| | ||||||||||| ||| Sbjct 101 ATAGTCGCTGGGTCTAGACCCGAAGCGAAGTGATCTAGCCATGGGCAGGTTGAAG-CGCG 43 Query 236 GGTAA---CGCGTGATGGAGGA-CCGAACC 261 ||||| |||| ||||||| ||||||| Sbjct 42 GGTAAGACCGCG---TGGAGGACCCGAACC 16 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972789318656