Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001640265.1_202016- 05-08] 1,098 sequences; 22,339,351 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq606 351 4e-94 seq732 322 2e-85 seq731 316 8e-84 >seq606 Length=757 Score = 351 bits (388), Expect = 4e-94 Identities = 221/236 (94%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 450 GTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACC-CGTGAG 508 |||||||||||| |||||| | ||||||||||||||||||| |||| || || || || Sbjct 757 GTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCCTCGCAAG 698 Query 509 -GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTT 567 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 697 AGGTGCACAATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTT 638 Query 568 GGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGG 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 637 GGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGG 578 Query 628 AGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct 577 AGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGGGGCGA 522 >seq732 Length=508 Score = 322 bits (356), Expect = 2e-85 Identities = 335/432 (78%), Gaps = 13/432 (3%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| ||| ||||||| |||||||||||||||||||||||||||||| |||| ||||||| Sbjct 428 TGTAAAGTGCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAAT 369 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | | ||||||||||||||||||| |||||||||||||| ||||||| |||||| |||||| Sbjct 368 TCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGA 309 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 ||||||| |||||| ||||||||| |||||| ||||||||||||||||||||||| || | Sbjct 308 TGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCAT 249 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCT--CGGCCGGTGCACTCTTCTGCG 260 | ||||| || |||| | | || ||| || || | | || || | Sbjct 248 TTGATCAGACATG--GTGTTTTGCGCCCTCTGCTCCTTGTGGGTGGGGGAATC-TCGCAG 192 Query 261 GTCA---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTT 317 ||| |||||||||||| | || || ||||||| || ||||||| | ||| Sbjct 191 TTCACTGGGCCAGCATCAGTTTTGGTGGCAGGATAAA-TCCGTAGGAATGTAACTTGCTT 133 Query 318 CGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCG--CTCC 375 |||| || |||||||| | ||||| | ||| | ||||||||| | ||| | Sbjct 132 CGGGAAGTATTATAGCCTATG--GGAATACTGCCAACTGGGACTGAGGACTGCGACGTAA 75 Query 376 GGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTC 435 | | ||||||||||| |||||||| || || |||||||||| |||||||||||||||||| Sbjct 74 GTCAAGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTC 15 Query 436 TAACATCTATGC 447 |||| ||||||| Sbjct 14 TAACGTCTATGC 3 >seq731 Length=508 Score = 316 bits (350), Expect = 8e-84 Identities = 335/434 (77%), Gaps = 13/434 (3%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| ||| ||||||| |||||||||||||||||||||||||||||| |||| ||||||| Sbjct 81 TGTAAAGTGCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAAT 140 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | | ||||||||||||||||||| |||||||||||||| ||||||| |||||| |||||| Sbjct 141 TCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGA 200 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 ||||||| |||||| ||||||||| |||||| ||||||||||||||||||||||| || | Sbjct 201 TGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCAT 260 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCT--CGGCCGGTGCACTCTTCTGCG 260 | ||||| || ||| | | || ||| || | | | || || Sbjct 261 TTGATCAGACATG--GTGTTTTGTGCCCTCTGCTCCTTGTGGGTAGGGGAATC-TCGCAT 317 Query 261 GTCA---GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTT 317 ||| |||||||||||| | || || ||||||| || ||||||| || | | Sbjct 318 TTCACTGGGCCAGCATCAGTTTTGGTGGCAGGATAAA-TCCATAGGAATGTAGCTTGCCT 376 Query 318 CGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCG--CTCC 375 ||| || |||||||| | | ||||| | ||| || ||||||||| | ||| | Sbjct 377 CGGTAAGTATTATAGCCTGTG--GGAATACTGCCAGCTGGGACTGAGGACTGCGACGTAA 434 Query 376 GGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTC 435 | | ||||||||||| |||||||| || || |||||||||| |||||||||||||||||| Sbjct 435 GTCAAGGATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTC 494 Query 436 TAACATCTATGCGA 449 |||| ||||||||| Sbjct 495 TAACGTCTATGCGA 508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079976447900