Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001640265.1_202016- 05-08] 1,098 sequences; 22,339,351 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq599 244 3e-62 >seq599 Length=805 Score = 244 bits (270), Expect = 3e-62 Identities = 292/382 (76%), Gaps = 12/382 (3%) Strand=Plus/Plus Query 42 GTCGGTTCGG-TCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGAT 100 || ||||||| ||||||| || |||||| ||| |||||||||||| || ||||| Sbjct 13 GTGGGTTCGGGTCCTCCACGCGGTC-TTACCCGCGCTT-CAACCTGCCCAT-GGCTAGAT 69 Query 101 CGCCCGGTTTTCGGGTCTATTTCCCAGCGACTA--GACGCCCTAGTAAGACTCGCTTTTC 158 | | | || |||||||| ||||||||||| | |||||| | |||||||||| | Sbjct 70 CACTTCGCTT-CGGGTCTAGA-CCCAGCGACTATGGGCGCCCTGTTCGGACTCGCTTT-C 126 Query 159 GCTACGCCTCCCCTATTCGGTTAAGCTTTGCCACTGAAAA-TAAGTCGCTGACCCATTAT 217 |||||| || ||| | ||| | | | | |||||||| | ||| |||| | | |||| | Sbjct 127 GCTACGGCTTCCCCACACGGGTTAACCTCGCCACTGAGCACTAACTCGCAGGCTCATTCT 186 Query 218 ACAAAAGGTACGCAGTCACCCAA-CAAAGTGGGCTCCCACTGCTTGTACGCATACGGTTT 276 ||||||| |||| ||||||| | | ||| |||||| || | ||||| ||| ||||||| Sbjct 187 TCAAAAGGCACGCTGTCACCCCAGCCAAGGAGGCTCCAACGGATTGTAGGCACACGGTTT 246 Query 277 CAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTT 336 |||| |||||||||||||||| ||||||| |||||| |||||||||||||||||| || Sbjct 247 CAGGTACTATTTCACTCCCCTC-CCGGGGTACTTTTCACCTTTCCCTCACGGTACTGGTC 305 Query 337 CACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAA 396 | |||||||||| | ||||||||||| ||| | ||||| ||| ||||| || | Sbjct 306 CGCTATCGGTCACTAGGTAGTATTTAGGCTTAGCAAGTGGTCTTGCCAGATTCACACGAG 365 Query 397 GTTTCTCGTGCTCCGTCCTACT 418 ||||||| || |||| ||||| Sbjct 366 ATTTCTCGGGCCCCGTGCTACT 387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241586367232