Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001640265.1_202016- 05-08] 1,098 sequences; 22,339,351 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq580 486 6e-135 seq601 143 9e-32 >seq580 Length=973 Score = 486 bits (538), Expect = 6e-135 Identities = 287/296 (97%), Gaps = 2/296 (1%) Strand=Plus/Plus Query 249 CTACACCTCTCAA-GTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCT 307 ||||||| ||| | ||| ||||||| ||| |||||||||||||||||||||||||||| Sbjct 1 CTACACC-CTCTATGTCTCTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTCT 59 Query 308 TTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAG 367 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 60 TTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAG 119 Query 368 GGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTT 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 120 GGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTT 179 Query 428 GGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTT 487 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 180 GGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTT 239 Query 488 CACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 240 CACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 295 >seq601 Length=793 Score = 143 bits (158), Expect = 9e-32 Identities = 87/92 (95%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct 702 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACATCTGCGTTATC 761 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCC 98 |||||||||||||||||||||||||||||||| Sbjct 762 GTTTAACAGATGTGCCGCCCCAGCCAAACTCC 793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635182045504