Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20sp._20_27boulardii_27_20[genbank_20GCA_5F001413975.1 _202015-11-02] 27 sequences; 12,001,065 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq10 470 3e-130 seq26 197 2e-48 seq25 168 1e-39 >seq10 Length=1042097 Score = 470 bits (520), Expect = 3e-130 Identities = 281/295 (95%), Gaps = 0/295 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||||| |||||| |||| || || |||||||||||||||||||||||||||||| Sbjct 431829 TACTAAGTTCAATTACTATTGCGGTAACATTCATCAGTAGGGTAAAACTAACCTGTCTCA 431888 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 431889 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 431948 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct 431949 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGAATCAAAAAGCAATGTCGCTAT 432008 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 432009 GAACGCTTGACTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 432068 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 432069 CAAATTCCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 432123 Score = 470 bits (520), Expect = 3e-130 Identities = 281/295 (95%), Gaps = 0/295 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||||| |||||| |||| || || |||||||||||||||||||||||||||||| Sbjct 440909 TACTAAGTTCAATTACTATTGCGGTAACATTCATCAGTAGGGTAAAACTAACCTGTCTCA 440968 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 440969 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 441028 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct 441029 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGAATCAAAAAGCAATGTCGCTAT 441088 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 441089 GAACGCTTGACTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 441148 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 441149 CAAATTCCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 441203 Score = 470 bits (520), Expect = 3e-130 Identities = 281/295 (95%), Gaps = 0/295 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||||| |||||| |||| || || |||||||||||||||||||||||||||||| Sbjct 449989 TACTAAGTTCAATTACTATTGCGGTAACATTCATCAGTAGGGTAAAACTAACCTGTCTCA 450048 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 450049 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 450108 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct 450109 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGAATCAAAAAGCAATGTCGCTAT 450168 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 450169 GAACGCTTGACTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 450228 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 450229 CAAATTCCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 450283 Score = 470 bits (520), Expect = 3e-130 Identities = 281/295 (95%), Gaps = 0/295 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||||| |||||| |||| || || |||||||||||||||||||||||||||||| Sbjct 459064 TACTAAGTTCAATTACTATTGCGGTAACATTCATCAGTAGGGTAAAACTAACCTGTCTCA 459123 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 459124 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 459183 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct 459184 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGAATCAAAAAGCAATGTCGCTAT 459243 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 459244 GAACGCTTGACTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 459303 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 459304 CAAATTCCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 459358 Score = 470 bits (520), Expect = 3e-130 Identities = 281/295 (95%), Gaps = 0/295 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||||| |||||| |||| || || |||||||||||||||||||||||||||||| Sbjct 468124 TACTAAGTTCAATTACTATTGCGGTAACATTCATCAGTAGGGTAAAACTAACCTGTCTCA 468183 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 468184 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 468243 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct 468244 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGAATCAAAAAGCAATGTCGCTAT 468303 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 468304 GAACGCTTGACTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 468363 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 468364 CAAATTCCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 468418 Score = 470 bits (520), Expect = 3e-130 Identities = 281/295 (95%), Gaps = 0/295 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||||| |||||| |||| || || |||||||||||||||||||||||||||||| Sbjct 477211 TACTAAGTTCAATTACTATTGCGGTAACATTCATCAGTAGGGTAAAACTAACCTGTCTCA 477270 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 477271 CGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 477330 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct 477331 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGAATCAAAAAGCAATGTCGCTAT 477390 Query 181 GAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 240 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 477391 GAACGCTTGACTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCT 477450 Query 241 CAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 477451 CAAATTCCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 477505 >seq26 Length=6270 Score = 197 bits (218), Expect = 2e-48 Identities = 205/265 (77%), Gaps = 3/265 (1%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||| || |||||||||||| ||||| || |||||||||| ||||| ||||||| Sbjct 3818 TCATCATTATTTTAAAACTAACCTTTCTCACTACT-TCTAAACCCATCTCACTTTCCCTA 3760 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||| | | ||||||||||| |||||| |||||| |||| ||| ||| || | || | Sbjct 3759 TTATTTTTT-AACAATCCAACTCTTACCTAATTCTTCTTCTTTATTATATTAATATCCTA 3701 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||| || |||||||| ||| || |||| ||| ||| || |||||| ||| |||||| Sbjct 3700 CATCTAATAATCAAAAATCAATTTCTCTATTAACTCTTTACTTCCACAATCCATTTATCC 3641 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 || | |||||||||| |||||||| ||||||||| | | |||||| ||| ||| Sbjct 3640 CTTTTTTAACTTTTCTTTCACCTCTATCCTCAAATTCCTATTTACTAAATTATCTATATT 3581 Query 271 CCACACTTTCATGGTTTGTATTCAC 295 |||||||||||| ||| ||||||| Sbjct 3580 CCACACTTTCAT-TTTTTTATTCAC 3557 >seq25 Length=13963 Score = 168 bits (186), Expect = 1e-39 Identities = 193/257 (75%), Gaps = 3/257 (1%) Strand=Plus/Minus Query 22 GGGCG--ACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCT 79 ||||| || | || ||| |||| ||||| |||| | | || ||||| | ||||||||| Sbjct 2448 GGGCGGAACAGGCAGCAGGAGGGGAAAACGAACCGGGCGCACGACGGGCGAAACCCAGCG 2389 Query 80 CACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATA 139 |||| ||| | || ||| |||||| ||||||| |||||| | || ||| | || | Sbjct 2388 CACGGGCCCGAGGAGGGGGGGAACAAGCCAACGCGGACCGAAGGCGGCGGCGGGAGGAGA 2329 Query 140 GGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAA 199 ||||||||||||| ||||| | |||||||||| | ||| | |||||| | | ||||||| Sbjct 2328 GGAAGAGCCGACAGCGAAGAAGCAAAAAGCAAGGGCGCGAGGAACGCGGGACGGCCACAA 2269 Query 200 GCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAA 259 ||||| | ||| | || ||| | |||||| | |||| |||| |||||||| ||| Sbjct 2268 GCCAGGGAGCCC-GGGGGAACGGGGCGGGCACCGCGAGCCGCAAAGGCCGAGGGACGAAA 2210 Query 260 GGATCGATAGGCCACAC 276 ||| ||| ||||||||| Sbjct 2209 GGAGCGAGAGGCCACAC 2193 Score = 147 bits (162), Expect = 4e-33 Identities = 184/245 (75%), Gaps = 7/245 (3%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 || ||| |||| ||||| |||| | | || ||||| | ||||||||| |||| ||| | Sbjct 11303 CAGCAGGAGGG-AAAACGAACCGG-CGCACGACGGGCGAAACCCAGCGCACGG-CCCGAG 11247 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 || ||| |||||| ||||||| |||||| | || ||| | || ||||||||||||| Sbjct 11246 GAGGGGG-GAACAAGCCAACGCGGACCGAAGGCGGCGGCGGGAGGAGAGGAAGAGCCGAC 11188 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 | ||||| | |||||||||| | ||| | |||||| | | |||||||||||| | ||| Sbjct 11187 AGCGAAGAAGCAAAAAGCAAGGGCGCGAGGAACGCGGGACGGCCACAAGCCAGGGAGCCC 11128 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271 | || ||| |||||| | |||| |||| |||||||| |||||| ||| |||| Sbjct 11127 -GGGGGAAC--GGGCGGCACCGCGAGCCGCAAAGGCCGAGGGACGAAAGGAGCGAGAGGC 11071 Query 272 CACAC 276 ||||| Sbjct 11070 CACAC 11066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854399769312