Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21]
3,985 sequences; 11,595,011 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq2600 477 4e-132
seq3059 244 4e-62
>seq2600
Length=915
Score = 477 bits (528), Expect = 4e-132
Identities = 363/423 (86%), Gaps = 7/423 (2%)
Strand=Plus/Plus
Query 265 GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGG 324
|||||||||||| | || || ||||||| || ||||||| | ||||||| |
Sbjct 65 GGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCGTAGGAATGTAACTTGCTTCGGGAAG 123
Query 325 TGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGG 382
| |||||||| || |||| | ||| || ||||||||| | ||| | | | |||
Sbjct 124 TATTATAGCCTATGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGG 181
Query 383 ATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATC 442
|||||||| |||||||| || || |||||||||| |||||||||||||||||||||| ||
Sbjct 182 ATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTC 241
Query 443 TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACC 502
||||| ||||||||||||| |||||| | ||||||||||||||||||| |||| || ||
Sbjct 242 TATGCAAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCC 301
Query 503 -CGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCAT 560
|| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 302 TCGCAAGAGGTGCACAATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCAT 361
Query 561 AGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACT 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 362 AGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACT 421
Query 621 CTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGG 680
|||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct 422 CTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGGGG 481
Query 681 CGA 683
|||
Sbjct 482 CGA 484
>seq3059
Length=527
Score = 244 bits (270), Expect = 4e-62
Identities = 161/178 (90%), Gaps = 0/178 (0%)
Strand=Plus/Plus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||| ||| ||||||| |||||||||||||||||||||||||||||| |||| |||||||
Sbjct 323 TGTAAAGTGCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAAT 382
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
| | ||||||||||||||||||| |||||||||||||| ||||||| |||||| ||||||
Sbjct 383 TCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGA 442
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGC 200
||||||| |||||| ||||||||| |||||| ||||||||||||||||||||||| ||
Sbjct 443 TGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGC 500
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079914521750
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |