Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21] 3,985 sequences; 11,595,011 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq3585 96.9 6e-18 >seq3585 Length=300 Score = 96.9 bits (106), Expect = 6e-18 Identities = 142/195 (73%), Gaps = 16/195 (8%) Strand=Plus/Plus Query 99 CTCTAAGTCAGAATCCATGCCAGAACGGGGTGA-TTCTCTCCT--GCACATCGTAGTCGG 155 |||||||||||||||||||| |||||| ||||| |||| | || |||| ||| || Sbjct 1 CTCTAAGTCAGAATCCATGCTAGAACGCGGTGATTTCTTTGCTCCACACAATATAGATGG 60 Query 156 ATACGAAT-AGGCTT--------CGGCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCC 205 |||||||| |||| | || | | ||||| |||||||| ||||||| || Sbjct 61 ATACGAATAAGGCGTCCTTGTGGCGTCGCTGAACCATAGCAGGCTAGCAACGGTGCACTT 120 Query 206 CGCGGAA--GCGCGGGGCGCTCAGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAA 263 |||||| || ||| ||| ||||||| |||||||| ||| |||| |||||||| Sbjct 121 GGCGGAAAGGCCTTGGGTGCT-TGCTGGCGAATTGCAATGTCATTTTGCGTGGGGATAAA 179 Query 264 TCCTTTGCAGACGAC 278 || |||| | ||||| Sbjct 180 TCATTTGTATACGAC 194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819168375040