Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F000732305.1_202014-07-21] 3,985 sequences; 11,595,011 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1567 185 7e-42 seq2084 167 2e-36 seq3120 104 2e-17 seq131 84.2 2e-11 >seq1567 Length=2367 Score = 185 bits (204), Expect = 7e-42 Identities = 630/965 (65%), Gaps = 20/965 (2%) Strand=Plus/Plus Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061 || || |||| || || | || || ||||| | || || || | | ||||||||| Sbjct 923 GGTAGAGCAATGGAAGCTAAATTACAAACAGCAGTTTCATCTGGGGAAGAATACTCGACG 982 Query 66062 ATTTCGGTGCACAGATTACTGCAGCGT--ATGGTGCCCAAATTCTGTTGATTACTCTTGC 66119 |||||| |||| || || | | ||||| |||| |||||||| || |||| | Sbjct 983 ATTTCGCAACACAAGTT--TGACGATTTGATGGTACCCAGGTTCTGTTGGTTGGTCTTTC 1040 Query 66120 GATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGA 66179 || || |||||||| || | |||| | || || ||||| || ||| | | | || Sbjct 1041 TGTTACAGGCATCCTTATAAACCATGAAGGGTGTACCGGTTTCTGTTTGTGCTTGCAAGA 1100 Query 66180 TGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAAT 66239 |||||| ||| | | ||||| | || |||| | ||||| | ||||||| Sbjct 1101 TGGCGTACCATACCTTTTGAGCCTTGATGGTTT-TACCACG--ACCTTCTCTTTCGTAAC 1157 Query 66240 GTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGA----CACTTG 66295 | || || | |||||| ||||||||| || ||| || || ||| |||||| Sbjct 1158 GGGTATATAGCTCTTCGAATTCTTCACCCCAAACGTCGTCCAAACCTGGGGCAGCACTTG 1217 Query 66296 TGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGT 66355 ||| | | || || | ||| | ||||||| ||| ||||| ||| || ||||| || Sbjct 1218 -GTG-AGA-ATAAG-GTCCAGGCCCCATCCTCTTCGACACGCTTCATGAAAAGATCGGGA 1273 Query 66356 ATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGC 66415 ||||| || || ||| | ||| | ||| || || || | || ||| | || | Sbjct 1274 ATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCTTCCTTACCATGAGTCTTTCTG 1333 Query 66416 AAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCC 66475 | |||| || || |||||||| ||||||||||| |||| | | | ||| || | || Sbjct 1334 ATATCGACAAAGTCGAAGATGTCTGCATGCCATGGCTCCAAGAAAAGGGCAAAGGCACCG 1393 Query 66476 ATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATC 66535 | ||| ||||||||||| ||||| || || |||||||||||||| | ||| Sbjct 1394 GGTCTCTTGTTACCACCTTGGTCCACGTAACGTGCAGTGTTGTTGAAGACACGGATCATG 1453 Query 66536 GGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATA 66595 || | | |||||| || | || ||||| || | || || ||| | || ||| Sbjct 1454 GGAATCAACCCGTTTGAAGTACCGTTGGTACCTGCAATATAAGAGCCTGTGGAACGAATA 1513 Query 66596 TCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACT 66655 | || | || ||||||| |||||| || ||||| || || ||||| || || Sbjct 1514 TTGTTGATATGAAGACCAACACCACCTGCAGTCTTGGAAATCATGGCACACTCTTTCAAA 1573 Query 66656 GTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGT 66715 || | | || || ||||||||||| |||| |||| | ||| | || ||| | | Sbjct 1574 GTGTCGTAAATACCTTCAATGGAGTCGTCCTTCATGGCAATCAGGAAACAAGAAGACATT 1633 Query 66716 TGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGA 66775 || || | || || |||| || || ||||| | |||||| || |||| || | | Sbjct 1634 TGAGGATGTGGCGTACCGGCATTAAATAGTGTGGGGGAAGCGTGGGTGAAGT-ATCTCAA 1692 Query 66776 -GACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG- 66833 ||||| | ||||| |||| | || | || || | ||| ||||| || || | Sbjct 1693 CGACATCAAGTTGTAAGTCTTCAGCACGGACTCGATATCGCTGCCGTGAATACCTAGGGC 1752 Query 66834 CACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGT 66893 |||| ||||| | | | ||| || |||||| ||| | | | | | | || Sbjct 1753 CACA-CGCATGACCAAATGTTGGGGACGTTCGGCCACTTCACCGTCTAGTCTTAGCAGGT 1811 Query 66894 AGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATCGTTAGCATGCACGA 66953 | || |||||||| ||||| | ||||| || | ||| |||||||| | | | ||||| Sbjct 1812 A-GAACGTTCCAGAGTCTTAAACCCAAAATAGGTGTACTTGAAATCTCTGTCGTACACGA 1870 Query 66954 TGGCC 66958 ||||| Sbjct 1871 TGGCC 1875 >seq2084 Length=1521 Score = 167 bits (184), Expect = 2e-36 Identities = 400/593 (67%), Gaps = 14/593 (2%) Strand=Plus/Plus Query 61059 CGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTC 61118 ||| |||||||||||| |||| | || || |||| |||||| || || || || Sbjct 338 CGTCTTGTTCCCCATCCAGTACCACGAGATCTGGCAATCGTACAAGCGTGCCGAGGCCTC 397 Query 61119 CTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGCGTTTATC 61178 ||||||||| | ||||| |||| |||||||| ||||| | |||||| | | Sbjct 398 CTTCTGGACTGCCGAGGAAATCGACTTGTCCAAGGACATCCACGACTGGAACAACAGAAT 457 Query 61179 GAGCGGTGAAC--AACATT--TCAT-TAAACATGTGTTGGCGTTCTTTGCCGCTTCGGAC 61233 || || ||| || ||| |||| | | | ||| | || ||||| ||||| || ||| Sbjct 458 GAACGAA-AACGAAAGATTCTTCATCTCCAGA-GTGCTTGCCTTCTTCGCCGCCTCCGAC 515 Query 61234 GGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCG 61293 ||||||||||| || || || | || ||| | ||||| || | ||||||| Sbjct 516 GGTATCGTCAACGAAAACTTGGTCGAGAACTTCTCCACCGAGGTCCAGATCCCGGAGGCC 575 Query 61294 CGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTT 61353 |||||||||| |||||||| || || ||||| ||||||| || | ||| | Sbjct 576 AAGAGTTTCTACGGGTTCCAGATCGCAATCGAGAACATCCACTCCGAAACCTACTCCTTG 635 Query 61354 CTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGCCATCGAG 61413 | ||||| || ||||||| ||| | |||| | || |||||||| |||||||| Sbjct 636 TTGATCGACACCTACATCAAGGACCCCAAGGAAAGCGAGTTCTTGTTCAACGCCATCGAC 695 Query 61414 ACGATACCGGCGGTGAAGCG-GAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAAC 61472 || || || | | ||| ||| || || |||||| | | ||||| |||| || | Sbjct 696 ACCATCCCAGAAAT-CTGCGAGAAGGCCGAATGGGCCCTTAGATGGAT--CCAGGACGCC 752 Query 61473 G--GCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGT 61530 | || || |||||| || || | || || || |||| ||||| || || Sbjct 753 GATGCCCTGTTCGGTGAAAGACTGGTCGCGTTCGCCTCCATCGAAGGTGTCTTCTTTTCC 812 Query 61531 GGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTC 61590 || || || ||| | ||||| |||||||||||| | || | ||||||||| |||||||| Sbjct 813 GGGTCCTTCGCCTCCATCTTCTGGTTGAAGAAAAGAGGTATGATGCCCGGTTTGACCTTC 872 Query 61591 AGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTG-CTGTTT 61642 ||| || |||| | | ||||| || |||| || |||| |||||| Sbjct 873 TCCAACGAACTGATCTGCAGAGACGAAGGTTTGCACACCGACTTTGCCTGTTT 925 >seq3120 Length=488 Score = 104 bits (114), Expect = 2e-17 Identities = 269/410 (66%), Gaps = 0/410 (0%) Strand=Plus/Plus Query 66515 TTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATG 66574 |||||||||||||| | ||| || | | ||||||||| | || || || || | ||| Sbjct 7 TTGTTGAAGACACGGATCATAGGAATTAACCCGTTAGAAGTCCCGTTCGTACCAGCAATG 66 Query 66575 GGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAG 66634 || || ||| || || | ||||| || |||||||||||||| || || || || Sbjct 67 TAAGAGCCGGTTGCACGAATGTTGTGAATATGTAGACCAATACCACCAGCAGTTTTGGAA 126 Query 66635 ATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTC 66694 || |||||| || || || | | || || |||||||| ||| |||| || | Sbjct 127 ATCAAAGCACATTCCTTCAAAGTGTCGTAGATACCTTCAATGGAATCATCCTTCATTGCA 186 Query 66695 AGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTA 66754 | ||| | || || | ||| || || ||||| | || ||| | || || | Sbjct 187 ACTAGGAAACAGGAGGACATTTGAGGCTTTGGTGTACCAGCGTTGAATAAAGTTGGAGAG 246 Query 66755 GCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTT 66814 ||||| |||||||| | | ||||| | || || || || | | || |||||||| Sbjct 247 GCGTGAGTAAAGTATTTTAGGGACATCAAGTTATAGGTTTCTAGAGCGGCCTCAATGTTA 306 Query 66815 TCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGA 66874 || || ||||| || | || || ||| | | || ||| || ||||| | | || Sbjct 307 TCACCGTGAATACCTAAGGCGACTCTCATGATTAAGTGTTGTGGACGTTCAGCAACTTGA 366 Query 66875 TCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTA 66924 | |||| || |||||| || ||||| | || || | ||| ||||| Sbjct 367 CCGTTGACTCTCAATAAGTACGAACGTTCTAAAGTTTTAAAACCGAAGTA 416 >seq131 Length=11630 Score = 84.2 bits (92), Expect = 2e-11 Identities = 140/200 (70%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 9148 TGGGCCCCATTTACGGTTTCCAGTGGCGACATTTCGGTGCTCGGTACATCGATTGTCATA 9207 |||||||| |||| || ||||| ||| ||||||||||||| | |||| || || Sbjct 8909 TGGGCCCCGTTTATGGGTTCCAATGGAGACATTTCGGTGCCCAATACAAGACGTGCGATG 8968 Query 9208 CGGACTATACGGGCCAAGGTGTGGATCAGTTGGCGCAATGTATGCATCAGATCCAATATG 9267 |||||||| || ||||| | |||||| || ||| ||| || || || || | Sbjct 8969 ATGACTATACCGGACAAGGCATCGATCAGCTGAAGCAGGTTATACA-CAAATTAAAAACA 9027 Query 9268 AGCCGAGTAG-TCGACGCATGATTATGACTGCCTGGAATCCGAACGATTTGGACAAGATG 9326 | || | | || | || || |||| ||| |||||||| ||||| ||||||||| Sbjct 9028 AACCCTTACGATAGAAGGATCATCATGAGTGCTTGGAATCCTGCAGATTTTGACAAGATG 9087 Query 9327 GTATTGCCGCCATGCCATAT 9346 | || || ||||||||||| Sbjct 9088 GCTTTACCACCATGCCATAT 9107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397548691240400