Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07] 55 sequences; 11,656,823 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq50 257 6e-66 >seq50 Length=5733 Score = 257 bits (284), Expect = 6e-66 Identities = 392/545 (72%), Gaps = 20/545 (4%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGAC---AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCC 58 ||||||||||||||||| | ||||||||||| |||||||||| | |||||||||| || Sbjct 3078 CGAGTCCGAACAGGGCGCCCATAGTCGCTGGGTCTAGACCCGAAGCGAAGTGATCTAGCC 3137 Query 59 ATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAA 118 |||| |||| ||||| ||||| || | |||||| |||||||||| | |||||||| Sbjct 3138 ATGGGCAGGTTGAAGCGCGGGTAAGACCGCGTGGAGGACCGAACCCACCAGGGTTGAAAA 3197 Query 119 ATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTC 178 | |||||||| |||||| |||||||||||||| || ||||||| | ||||||||||| Sbjct 3198 CCTGGGGGATGACCTGTGGTTAGGGGTGAAAGGCCAATCAAACTTCGTGATAGCTGGTTC 3257 Query 179 TCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATCAC-CATCGGGGGTAGAGC-ACTGTT 236 || |||||| |||||||| || ||| || | | ||| |||||||| |||| Sbjct 3258 TCCCCGAAATGCATTTAGGTGCAGCGTCACGTGTTTCTTGCCGGAGGTAGAGCTACTG-G 3316 Query 237 ATGG-CTAGGGG---GTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCA 292 |||| | | ||| || | ||| || | | |||||||||||||| | | Sbjct 3317 ATGGCCGATGGGCCCTACAAGGTTACTGACGTCAGC----CAAACTCCGAATGCCGGTAA 3372 Query 293 GTTTTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCC 352 || | || || |||||| ||| | |||| ||||| ||||||| || | || Sbjct 3373 GTGAAAGCGTGGCAGTGAGACTGCGGGGGATAAGCTCCGTAGTCGAGAGGGAAACAGCCC 3432 Query 353 GGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTA 412 ||| | | ||||||||||| || | ||||||| | || || || |||| Sbjct 3433 AGACCACCGGCTAAGGCCCCTAAGCGTGTGCTAAGTGGGA--AAGGATGTGGAGTTGCAC 3490 Query 413 AGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCAC 472 ||||| | |||| |||||||| |||||||||| | || ||||||||||||| ||||||| Sbjct 3491 AGACAACCAGGAGGTTGGCTTAGAAGCAGCCA-CCCTTGAAAGAGTGCGTAATAGCTCAC 3549 Query 473 TAGTCGAG-GAGTCGGGCGTGGATAAT-AATCGGGTATTAAGTTGTCTACCGAAGCAGTG 530 | ||| || || || ||| || ||| | |||| | |||| | ||||||| ||| Sbjct 3550 TGGTCAAGTGATTC-CGCGCCGACAATGTAGCGGGGCTCAAGTACACCGCCGAAGCCGTG 3608 Query 531 GGATC 535 | ||| Sbjct 3609 GCATC 3613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689599070720