Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07] 55 sequences; 11,656,823 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq50 681 0.0 >seq50 Length=5733 Score = 681 bits (754), Expect = 0.0 Identities = 492/564 (87%), Gaps = 7/564 (1%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||| ||| |||||| ||||||||||||||||||||||| ||||| |||||||||||| Sbjct 4936 TCGACCTGTCAGTCTCACAGTCAAGCTCCCTTGTGCACTTGCACTCGACACCTGATTGCC 4877 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 |||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||| Sbjct 4876 AACCAGGCTGAGGGAACCTTTGAGCGCCTCCGTTACATTTTAGGAGG-CAACCGCCCCAG 4818 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCAC 180 |||||||||||||||||||||||||| || ||||| || || |||||||| |||| Sbjct 4817 TTAAACTACCCACCAGGCACTGTCCCTGGTCCGGATCACGGACCGAGGTTAGACATCCGA 4758 Query 181 TACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGT 240 ||| ||||||||||||||||| |||||||| |||| |||| || ||| ||| Sbjct 4757 AGCGGCCAGAGTGGTATTTCAACGTTGACTCCACCCGCACTGGCGTACGGGCTTCACAGT 4698 Query 241 CTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCCC 300 |||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||| Sbjct 4697 CTCCCACCTATCCTACACAAGCCGCACCGAACACCAATACCAAGCTATAGTAAAGGTCCC 4638 Query 301 GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGG 360 ||||||||| |||||||| ||||| |||||||||||||||||||| ||||||||| ||| Sbjct 4637 GGGGTCTTTCCGTCCTGCTGCGCGTAACGAGCATCTTTACTCGTAGTGCAATTTCGCCGA 4578 Query 361 GCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCG 420 | | |||||||||||| | | ||||||||||||||||||||||||||||||||||||| Sbjct 4577 GTTCGCGGTTGAGACAGCGGAGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCG 4518 Query 421 ACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCA 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 4517 ACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTAA 4458 Query 481 ATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGG 540 ||| || |||| | | | | ||| | || |||||||||||||||||||||||| Sbjct 4457 ATTCTGAGCTTCAC-CCCGAAG-GGT----TGACCCGTCCTCTTAACCTTCCAGCACCGG 4404 Query 541 GCAGGCGTCAGTCCGTATACCTCG 564 |||||||||||||||||||| ||| Sbjct 4403 GCAGGCGTCAGTCCGTATACATCG 4380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702399063680