Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20uvarum_20[genbank_20GCA_5F002242635.1_202017-08-07] 55 sequences; 11,656,823 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq14 192 5e-44 seq28 172 4e-38 seq4 140 3e-28 seq11 84.2 2e-11 >seq14 Length=143611 Score = 192 bits (212), Expect = 5e-44 Identities = 631/967 (65%), Gaps = 23/967 (2%) Strand=Plus/Plus Query 66002 GGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACA 66061 || ||||||| || || | ||| || |||||| | || || || | | ||||||||| Sbjct 7555 GGTAGGGCAATGGAAGCTAAGTTACAAACAGCTGTTTCATCTGGGGAAGAATACTCGACG 7614 Query 66062 ATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGA 66121 |||||| |||||||| | || || ||||| || || || || |||| | Sbjct 7615 ATTTCGCAACACAGATTCGACGATTTGATAGTACCCAAGTTTTGCTGGTTGGTCTTTCTG 7674 Query 66122 TTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATG 66181 || || || || ||||| | |||| | || || ||||| || ||| | | | |||| Sbjct 7675 TTACAAGCGTCTTTGTAAACCATGAATGGCGTACCGGTTTCTGTTTGTGCTTGTAAGATG 7734 Query 66182 GCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGT 66241 |||| ||| | | ||||| | || |||| | ||||| | ||||||| | Sbjct 7735 GCGTACCACACTTTTTGGGCCTTGATGGTTT-TACCACG--ACCTTCTCTTTCGTAACGG 7791 Query 66242 TCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGAC----ACTTGTG 66297 ||| || | |||||| ||||||||| || ||| || || ||| ||||| | Sbjct 7792 GTGTATAGCTCTTCGAATTCTTCACCCCAAACGTCGTCCAAACCTGGGGCAGAACTTG-G 7850 Query 66298 TGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTAT 66357 || | | | | | ||| | ||||||| ||| ||||| ||| || |||||||| || Sbjct 7851 TGAAAATA---GGGTCCAGGCCCCATCCTCTTCGACACGCTTCATGAAAAGATCAGGAAT 7907 Query 66358 CCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAA 66417 ||| ||||| ||| | ||| | ||| || || || | || ||| |||| | | Sbjct 7908 CCATAGGGCAGGGAACAAATCTCTTGCACGAATTTCTTCCTTACCATGAGTTTTTCTGAT 7967 Query 66418 GTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCAT 66477 || | || || |||||||| ||||||||||| |||| | | | ||| || | || Sbjct 7968 ATCAACAAAGTCGAAGATGTCTGCATGCCATGGCTCCAAGAAAAGGGCAAAGGCACCGGG 8027 Query 66478 ACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGG 66537 | ||| ||||||||||| ||||| || || || ||||| ||||| | ||| || Sbjct 8028 TCTCTTGTTACCACCTTGGTCCACGTAACGTGCAGTGTTATTGAATACACGGATCATGGG 8087 Query 66538 TACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATC 66597 | | ||| || || | || ||||| || | || || ||| | || |||| Sbjct 8088 AATCAACCCATTTGAAGTACCGTTGGTACCTGCAATATAAGAGCCTGTGGAACGAATATT 8147 Query 66598 GTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGT 66657 || | || ||||||| |||||| || ||||| || || ||||| || || || Sbjct 8148 GTTGATATGAAGACCAACACCACCTGCAGTCTTGGAAATCATGGCACACTCTTTCAAAGT 8207 Query 66658 CCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTG 66717 | | || || || |||||||| |||| |||| | ||| | || ||| | ||| Sbjct 8208 GTCGTAAATACCTTCGATGGAGTCGTCCTTCATGGCAATCAGGAAACAAGAAGACATTTG 8267 Query 66718 GGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGA-G 66776 || | || || |||| || || ||||| | |||||| || |||| || | | | Sbjct 8268 AGGGTGTGGCGTACCGGCATTAAATAGAGTGGGGGAAGCGTGAGTGAAGT-ATCTCAATG 8326 Query 66777 ACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CA 66835 |||| | ||||| |||| | || | || |||| || || || || || | || Sbjct 8327 ACATCAAGTTGTAAGTCTTCAGCACGGACTCGATGTCGCTACCGTGGATACCCAGGGCCA 8386 Query 66836 CATCGCATCAGGAGGTATTGAGGCCGTTCGACCA----GCCGATCCTTGATATGCATTAA 66891 || ||||| | || | ||| || |||||| ||| |||| || | | | | || Sbjct 8387 CA-CGCATGACCAGATGTTGGGGACGTTCGGCCACTTCGCCG-TC--TAGTCT-TAGCAA 8441 Query 66892 GTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACGAGTAATTGAAATCGTTAGCATGCAC 66951 |||||| ||||||| ||||||| || || || | ||| |||||||| | | | ||| Sbjct 8442 GTAGGAACGTTCCAAAGTCTTGAACCCGAAATAGGTGTACTTGAAATCTCTGTCGTACAC 8501 Query 66952 GATGGCC 66958 ||||||| Sbjct 8502 GATGGCC 8508 >seq28 Length=374213 Score = 172 bits (190), Expect = 4e-38 Identities = 401/593 (68%), Gaps = 14/593 (2%) Strand=Plus/Plus Query 61059 CGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTC 61118 ||| |||||||||||| |||| | || || |||| |||||| || || || || Sbjct 39328 CGTCTTGTTCCCCATCCAGTACCACGAGATCTGGCAATCGTACAAGCGTGCCGAGGCCTC 39387 Query 61119 CTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGCGTTTATC 61178 ||||||||| | ||||| |||| |||||||| ||||| | |||||| | | Sbjct 39388 CTTCTGGACTGCCGAGGAAATCGACTTGTCCAAGGACATCCACGACTGGAACAACAGAAT 39447 Query 61179 GAGCGGTGAAC--AACATT--TCAT-TAAACATGTGTTGGCGTTCTTTGCCGCTTCGGAC 61233 || || ||| || ||| |||| | | | ||| | || ||||| ||||| || ||| Sbjct 39448 GAACGAA-AACGAAAGATTCTTCATCTCCAGA-GTGCTTGCCTTCTTCGCCGCCTCCGAC 39505 Query 61234 GGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCG 61293 ||||||||||| || || || | || ||| | ||||| || | ||||||| Sbjct 39506 GGTATCGTCAACGAAAACTTGGTCGAGAACTTCTCCACCGAGGTCCAGATCCCGGAGGCC 39565 Query 61294 CGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTT 61353 |||||||||| |||||||| || || ||||| ||||||| || | ||| | Sbjct 39566 AAGAGTTTCTACGGGTTCCAGATCGCGATCGAGAACATCCACTCCGAAACCTACTCCTTG 39625 Query 61354 CTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGCCATCGAG 61413 | ||||| || ||||||| ||| | |||| | || |||||||| |||||||| Sbjct 39626 TTGATCGACACCTACATCAAGGACCCCAAGGAAAGCGAGTTCTTGTTCAACGCCATCGAC 39685 Query 61414 ACGATACCGGCGGTGAAGCG-GAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAAC 61472 || || || | | ||| ||| || || |||||| | | ||||| |||| || | Sbjct 39686 ACCATCCCAGAAAT-CTGCGAGAAGGCCGAATGGGCCCTTAGATGGAT--CCAGGACGCC 39742 Query 61473 G--GCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGT 61530 | || || |||||| || || | || || || |||| ||||| || ||| Sbjct 39743 GATGCCCTGTTCGGTGAAAGACTGGTCGCGTTCGCCTCCATCGAAGGTGTCTTCTTCTCC 39802 Query 61531 GGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTC 61590 || || || ||| | ||||| |||||||||||| | || | ||||||||| |||||||| Sbjct 39803 GGGTCCTTCGCCTCCATCTTCTGGTTGAAGAAAAGAGGTATGATGCCCGGTTTGACCTTC 39862 Query 61591 AGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTG-CTGTTT 61642 ||| || |||| | | ||||| || |||| || |||| |||||| Sbjct 39863 TCCAACGAACTGATCTGCAGAGACGAAGGTTTGCACACCGACTTTGCCTGTTT 39915 >seq4 Length=235297 Score = 140 bits (154), Expect = 3e-28 Identities = 389/597 (65%), Gaps = 0/597 (0%) Strand=Plus/Minus Query 66328 TTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCG 66387 ||| ||||| ||| || ||||| || | ||| || || ||| | ||| | || || Sbjct 177861 TTCGACACGCTTCATGAAAAGATCGGGAACCCATAGAGCTGGGAATAAATCTCTCGCACG 177802 Query 66388 TTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCA 66447 || || | |||||||| || | | ||||| ||| || ||||| || || ||||| Sbjct 177801 GATTTCTTCCTTACCGTGATTCTTTCTAATGTCGATGAAGTCGAAGATATCAGCGTGCCA 177742 Query 66448 TGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCG 66507 ||| |||| || | || || | || | ||| ||||| ||||| || || || Sbjct 177741 TGGCTCCAAATATAGAGCAAAGGCACCAGGTCTCTTGTTACCACCCTGGTCAACATAACG 177682 Query 66508 AGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCC 66567 || |||||||||||||| | ||| || | | ||||||||| | || || || || Sbjct 177681 GGCAGTGTTGTTGAAGACACGGATCATAGGAATTAACCCGTTAGAAGTCCCGTTCGTACC 177622 Query 66568 GTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGT 66627 | ||| || || ||| || || | ||||| || |||||||||||||| || || Sbjct 177621 AGCAATGTAAGAGCCGGTTGCACGAATGTTGTGAATATGTAGACCAATACCACCAGCAGT 177562 Query 66628 CTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTT 66687 || || || |||||| || || || | | || || |||||||| ||| |||| Sbjct 177561 TTTGGAAATCAAAGCACATTCCTTCAAAGTGTCGTAGATACCTTCAATGGAATCATCCTT 177502 Query 66688 GATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGT 66747 || | | ||| | || || | ||| || || ||||| | || ||| | || Sbjct 177501 CATTGCAACTAGGAAACAGGAGGACATTTGAGGCTTTGGTGTACCAGCGTTGAATAAAGT 177442 Query 66748 GGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATC 66807 || | ||||| |||||||| | | ||||| | || || || || | | || || Sbjct 177441 TGGAGAGGCGTGAGTAAAGTATTTTAGGGACATCAAGTTATAGGTTTCTAGAGCGGCCTC 177382 Query 66808 AATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGAC 66867 |||||| || || ||||| || | || || ||| | | || ||| || ||||| | Sbjct 177381 AATGTTATCACCGTGAATACCTAAGGCGACTCTCATGATTAAGTGTTGTGGACGTTCAGC 177322 Query 66868 CAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTA 66924 | || | |||| || |||||| || ||||| | || || | ||| ||||| Sbjct 177321 AACTTGACCGTTGACTCTCAATAAGTACGAACGTTCTAAAGTTTTAAAACCGAAGTA 177265 >seq11 Length=805687 Score = 84.2 bits (92), Expect = 2e-11 Identities = 140/200 (70%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 9148 TGGGCCCCATTTACGGTTTCCAGTGGCGACATTTCGGTGCTCGGTACATCGATTGTCATA 9207 |||||||| |||| || ||||| ||| ||||||||||||| | |||| || || Sbjct 225499 TGGGCCCCGTTTATGGGTTCCAATGGAGACATTTCGGTGCCCAATACAAGACGTGCGATG 225440 Query 9208 CGGACTATACGGGCCAAGGTGTGGATCAGTTGGCGCAATGTATGCATCAGATCCAATATG 9267 |||||||| || ||||| | |||||| || ||| ||| || || || || | Sbjct 225439 ATGACTATACCGGACAAGGCATCGATCAGCTGAAGCAGGTTATACA-CAAATTAAAAACA 225381 Query 9268 AGCCGAGTAG-TCGACGCATGATTATGACTGCCTGGAATCCGAACGATTTGGACAAGATG 9326 | || | | || | || || |||| ||| |||||||| ||||| ||||||||| Sbjct 225380 AACCCTTACGATAGAAGGATCATCATGAGTGCTTGGAATCCTGCAGATTTTGACAAGATG 225321 Query 9327 GTATTGCCGCCATGCCATAT 9346 | || || ||||||||||| Sbjct 225320 GCTTTACCACCATGCCATAT 225301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567733505200